Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
HORVU5Hr1G002090.11 | Barley | nucleus | 57.67 | 53.14 |
Zm00001d031167_P002 | Maize | nucleus | 59.09 | 52.93 |
TraesCS5D01G020600.1 | Wheat | nucleus | 55.68 | 52.41 |
KXG24110 | Sorghum | nucleus | 57.39 | 50.75 |
TraesCS5A01G014800.1 | Wheat | nucleus | 56.53 | 50.64 |
TraesCS5B01G013000.2 | Wheat | nucleus | 52.27 | 48.68 |
TraesCS7A01G558700.1 | Wheat | nucleus | 42.33 | 46.42 |
TraesCS7B01G483600.1 | Wheat | nucleus | 40.34 | 44.24 |
Os03t0671800-01 | Rice | nucleus | 43.75 | 40.0 |
HORVU7Hr1G120420.2 | Barley | nucleus | 36.65 | 33.42 |
Os03t0725800-01 | Rice | nucleus | 32.39 | 31.75 |
Os03t0229100-00 | Rice | plastid | 22.44 | 27.62 |
Os01t0577300-00 | Rice | cytosol | 8.24 | 23.77 |
Os03t0671000-00 | Rice | mitochondrion | 15.62 | 21.65 |
Os10t0104300-00 | Rice | nucleus | 19.6 | 21.1 |
Os08t0543700-00 | Rice | nucleus, peroxisome, plastid | 14.77 | 19.77 |
Os09t0519100-00 | Rice | nucleus | 14.2 | 18.94 |
Os01t0576100-00 | Rice | nucleus | 10.51 | 11.78 |
Os01t0705700-01 | Rice | nucleus | 14.77 | 11.3 |
Os10t0575000-01 | Rice | nucleus | 20.17 | 10.16 |
Os01t0235700-01 | Rice | nucleus | 17.33 | 9.89 |
Os04t0557200-01 | Rice | cytosol, nucleus, peroxisome | 15.06 | 9.48 |
Os04t0557800-00 | Rice | mitochondrion | 15.06 | 9.23 |
Os11t0258700-00 | Rice | mitochondrion | 10.8 | 7.87 |
Os04t0557500-00 | Rice | mitochondrion, plasma membrane | 3.12 | 6.11 |
Os07t0211500-00 | Rice | nucleus | 4.83 | 3.56 |
Protein Annotations
EntrezGene:107277136 | MapMan:15.5.32 | MapMan:25.4.1.7 | Gene3D:4.10.280.10 | UniProt:A0A0P0YCR0 | ProteinID:BAT18225.1 |
ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005515 |
GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0046983 | InterPro:HLH_DNA-bd_sf |
InterPro:IPR011598 | InterPro:IPR036638 | EnsemblPlantsGene:Os12g0632600 | EnsemblPlants:Os12t0632600-00 | PFAM:PF00010 | PFscan:PS50888 |
PANTHER:PTHR23042 | PANTHER:PTHR23042:SF74 | SMART:SM00353 | SUPFAM:SSF47459 | UniParc:UPI000393906D | RefSeq:XP_015618735.1 |
InterPro:bHLH_dom | SEG:seg | : | : | : | : |
Description
basic helix-loop-helix protein 021Similar to Helix-loop-helix DNA-binding domain containing protein. (Os12t0632600-00)
Coordinates
chr12:+:27088697..27091800
Molecular Weight (calculated)
36960.2 Da
IEP (calculated)
5.718
GRAVY (calculated)
-0.366
Length
352 amino acids
Sequence
(BLAST)
(BLAST)
001: MDDSSFFMQW AMDTLHQLPS DSTAAAAYAT DVAGDSGAFP SLQALRNASA AGGGGGFRDL TVQVDQVHRA NSWSSSDSPG GGAATAAAGW SPHVTGGGGR
101: GHRPMSWNFS AASAQPTTED SGGGGGGGVV PAPLQAMETT ATARAAVKKG GGGGSSSSAA APGYVQDHII AERRRREKIN QRFIELSTVI PGLKKMDKAT
201: ILGDAVKYVK ELQEKVKTLE EEDGGGRPAA MVVRKSSCSG RQSAAGDGDG EGRVPEIEVR VWERSVLVRV QCGNSRGLLV RLLSEVEELR LGITHTSVMP
301: FPASTVIITI TAKVEEGFNS TVDEIMRRLN SALLDQYNNG SVEETDQEIR RE
101: GHRPMSWNFS AASAQPTTED SGGGGGGGVV PAPLQAMETT ATARAAVKKG GGGGSSSSAA APGYVQDHII AERRRREKIN QRFIELSTVI PGLKKMDKAT
201: ILGDAVKYVK ELQEKVKTLE EEDGGGRPAA MVVRKSSCSG RQSAAGDGDG EGRVPEIEVR VWERSVLVRV QCGNSRGLLV RLLSEVEELR LGITHTSVMP
301: FPASTVIITI TAKVEEGFNS TVDEIMRRLN SALLDQYNNG SVEETDQEIR RE
001: MSILSTRWFS EQEIEENSII QQFHMNSIVG EVQEAQYIFP HSFTTNNDPS YDDLIEMKPP KILETTYISP SSHLPPNSKP HHIHRHSSSR ILSFEDYGSN
101: DMEHEYSPTY LNSIFSPKLE AQVQPHQKSD EFNRKGTKRA QPFSRNQSNA QDHIIAERKR REKLTQRFVA LSALVPGLKK MDKASVLGDA LKHIKYLQER
201: VGELEEQKKE RRLESMVLVK KSKLILDDNN QSFSSSCEDG FSDLDLPEIE VRFSDEDVLI KILCEKQKGH LAKIMAEIEK LHILITNSSV LNFGPTLDIT
301: IIAKKESDFD MTLMDVVKSL RSALSNFI
101: DMEHEYSPTY LNSIFSPKLE AQVQPHQKSD EFNRKGTKRA QPFSRNQSNA QDHIIAERKR REKLTQRFVA LSALVPGLKK MDKASVLGDA LKHIKYLQER
201: VGELEEQKKE RRLESMVLVK KSKLILDDNN QSFSSSCEDG FSDLDLPEIE VRFSDEDVLI KILCEKQKGH LAKIMAEIEK LHILITNSSV LNFGPTLDIT
301: IIAKKESDFD MTLMDVVKSL RSALSNFI
Arabidopsis Description
BHLH25Transcription factor bHLH25 [Source:UniProtKB/Swiss-Prot;Acc:Q9T072]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.