Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- plastid 1
- cytosol 1
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1D01G094000.1 | Wheat | cytosol, mitochondrion, nucleus, plastid | 26.36 | 63.0 |
| Os04t0557500-00 | Rice | mitochondrion, plasma membrane | 12.76 | 33.89 |
| Os04t0557200-01 | Rice | cytosol, nucleus, peroxisome | 23.22 | 19.86 |
| Os04t0557800-00 | Rice | mitochondrion | 21.97 | 18.29 |
| Os01t0705700-01 | Rice | nucleus | 13.39 | 13.91 |
| Os10t0575000-01 | Rice | nucleus | 16.32 | 11.16 |
| Os01t0235700-01 | Rice | nucleus | 12.97 | 10.05 |
| Os11t0258700-00 | Rice | mitochondrion | 8.79 | 8.7 |
| Os01t0576100-00 | Rice | nucleus | 3.56 | 5.41 |
| Os03t0671000-00 | Rice | mitochondrion | 2.72 | 5.12 |
| Os12t0632600-00 | Rice | nucleus | 3.56 | 4.83 |
| Os03t0671800-01 | Rice | nucleus | 3.14 | 3.9 |
| Os09t0519100-00 | Rice | nucleus | 2.09 | 3.79 |
| Os03t0725800-01 | Rice | nucleus | 2.72 | 3.62 |
| Os08t0543700-00 | Rice | nucleus, peroxisome, plastid | 1.88 | 3.42 |
| Os10t0104300-00 | Rice | nucleus | 2.3 | 3.36 |
| Os03t0229100-00 | Rice | plastid | 1.26 | 2.1 |
| Os01t0577300-00 | Rice | cytosol | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:Os07t0211500-00 | EnsemblPlantsGene:Os07g0211500 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0046983 |
| InterPro:MYC/MYB_N | PANTHER:PTHR11514 | PANTHER:PTHR11514:SF93 | PFAM:PF14215 | ProteinID:BAT00601.1 | SEG:seg |
| UniParc:UPI000393B958 | UniProt:A0A0P0X425 | MapMan:35.1 | : | : | : |
Description
BROWN PERICARP AND SEED COATSimilar to BHLH protein. (Os07t0211500-00)
Coordinates
chr7:+:6062889..6069304
Molecular Weight (calculated)
53090.8 Da
IEP (calculated)
4.736
GRAVY (calculated)
-0.646
Length
478 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGGEAHAAL QAVAQSLRWT YSLLWQLCPH QGSSLVWGEG HYNGAVKTRK STVMQPPPAE EEDDADHAAR HRSRQLRELY DWLQQAGENS SGGVQTSSTT
101: ASRRPGAALS PEDLTETEWF FLMSASYSFP PGIGLPGRAF ARRGHVWLTG ANEVDSKVFL RAILAKSAGI QTVVCIPVVD GVLEIGTTEK VEEDMGLIQY
201: ARGIFMDQHG IHMKPTLSQH STSNPVTHCT HQHPIQVQMQ LGITSQTKFD YSDELNADEE NDDTEEEGMS GSDTNNTDTE RNSGQLQLQM QDQLNMVSND
301: HQTIPNNAVS SELMQCEMSE VVRDGCSNNI LEDEIQMLMD CQNSNCQLNL QGPDEPCHSW HFLCEELQND YQPATEDQVA SPENTHYPKT LMTILHYNTL
401: RQQEMNIKNY LPVSEKSSFS RWTTPEGSDD NKTMISPGTT QRMLKSILMI VPSSHCSYRG AETPESRGGK GASGCHPR
101: ASRRPGAALS PEDLTETEWF FLMSASYSFP PGIGLPGRAF ARRGHVWLTG ANEVDSKVFL RAILAKSAGI QTVVCIPVVD GVLEIGTTEK VEEDMGLIQY
201: ARGIFMDQHG IHMKPTLSQH STSNPVTHCT HQHPIQVQMQ LGITSQTKFD YSDELNADEE NDDTEEEGMS GSDTNNTDTE RNSGQLQLQM QDQLNMVSND
301: HQTIPNNAVS SELMQCEMSE VVRDGCSNNI LEDEIQMLMD CQNSNCQLNL QGPDEPCHSW HFLCEELQND YQPATEDQVA SPENTHYPKT LMTILHYNTL
401: RQQEMNIKNY LPVSEKSSFS RWTTPEGSDD NKTMISPGTT QRMLKSILMI VPSSHCSYRG AETPESRGGK GASGCHPR
001: MDESSIIPAE KVAGAEKKEL QGLLKTAVQS VDWTYSVFWQ FCPQQRVLVW GNGYYNGAIK TRKTTQPAEV TAEEAALERS QQLRELYETL LAGESTSEAR
101: ACTALSPEDL TETEWFYLMC VSFSFPPPSG MPGKAYARRK HVWLSGANEV DSKTFSRAIL AKSAKIQTVV CIPMLDGVVE LGTTKKVRED VEFVELTKSF
201: FYDHCKTNPK PALSEHSTYE VHEEAEDEEE VEEEMTMSEE MRLGSPDDED VSNQNLHSDL HIESTHTLDT HMDMMNLMEE GGNYSQTVTT LLMSHPTSLL
301: SDSVSTSSYI QSSFATWRVE NGKEHQQVKT APSSQWVLKQ MIFRVPFLHD NTKDKRLPRE DLSHVVAERR RREKLNEKFI TLRSMVPFVT KMDKVSILGD
401: TIAYVNHLRK RVHELENTHH EQQHKRTRTC KRKTSEEVEV SIIENDVLLE MRCEYRDGLL LDILQVLHEL GIETTAVHTS VNDHDFEAEI RAKVRGKKAS
501: IAEVKRAIHQ VIIHDTNL
101: ACTALSPEDL TETEWFYLMC VSFSFPPPSG MPGKAYARRK HVWLSGANEV DSKTFSRAIL AKSAKIQTVV CIPMLDGVVE LGTTKKVRED VEFVELTKSF
201: FYDHCKTNPK PALSEHSTYE VHEEAEDEEE VEEEMTMSEE MRLGSPDDED VSNQNLHSDL HIESTHTLDT HMDMMNLMEE GGNYSQTVTT LLMSHPTSLL
301: SDSVSTSSYI QSSFATWRVE NGKEHQQVKT APSSQWVLKQ MIFRVPFLHD NTKDKRLPRE DLSHVVAERR RREKLNEKFI TLRSMVPFVT KMDKVSILGD
401: TIAYVNHLRK RVHELENTHH EQQHKRTRTC KRKTSEEVEV SIIENDVLLE MRCEYRDGLL LDILQVLHEL GIETTAVHTS VNDHDFEAEI RAKVRGKKAS
501: IAEVKRAIHQ VIIHDTNL
Arabidopsis Description
TT8Transcription factor TT8 [Source:UniProtKB/Swiss-Prot;Acc:Q9FT81]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.