Factsheet for Os07t0615200-01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
vacuole 1
mitochondrion 5
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Os01t0235700-01
Os01t0853400-01
Os03t0265500-01
Os03t0402800-01
Os05t0449500-01
Os07t0615200-01
Os08t0428400-01
Os08t0543700-00
Os09t0439200-01
Os09t0519100-00
Os10t0575000-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G19180.1	Os01t0235700-01	AT1G01260.1	21798944
AT1G19180.1	Os03t0402800-01	AT1G19180.1	19309455
AT1G19180.1	Os07t0615200-01	AT1G19180.1	19309455
AT1G19180.1	Os09t0439200-01	AT1G19180.1	19309455
AT1G19180.1	Os03t0402800-01	AT1G19180.1	21798944
AT1G19180.1	Os07t0615200-01	AT1G19180.1	21798944
AT1G19180.1	Os09t0439200-01	AT1G19180.1	21798944
AT1G19180.1	Os08t0543700-00	AT1G32640.1	18547396
AT1G19180.1	Os09t0519100-00	AT1G32640.1	18547396
AT1G19180.1	Os10t0575000-01	AT1G32640.1	18547396
AT1G19180.1	Os08t0543700-00	AT1G32640.1	19309455
AT1G19180.1	Os09t0519100-00	AT1G32640.1	19309455
AT1G19180.1	Os10t0575000-01	AT1G32640.1	19309455
AT1G19180.1	Os08t0428400-01	AT1G48500.1	19309455
AT1G19180.1	Os01t0853400-01	AT2G39940.1	17637677
AT1G19180.1	Os03t0265500-01	AT2G39940.1	17637677
AT1G19180.1	Os05t0449500-01	AT2G39940.1	17637677
AT1G19180.1	Os01t0853400-01	AT2G39940.1	18547396
AT1G19180.1	Os03t0265500-01	AT2G39940.1	18547396
AT1G19180.1	Os05t0449500-01	AT2G39940.1	18547396
AT1G19180.1	Os08t0428400-01	AT3G17860.1	19309455
AT1G74950.1	Os08t0543700-00	AT1G32640.1	19309455
AT1G74950.1	Os09t0519100-00	AT1G32640.1	19309455
AT1G74950.1	Os10t0575000-01	AT1G32640.1	19309455
AT1G74950.1	Os01t0853400-01	AT2G39940.1	18547396
AT1G74950.1	Os03t0265500-01	AT2G39940.1	18547396
AT1G74950.1	Os05t0449500-01	AT2G39940.1	18547396
AT1G74950.1	Os08t0428400-01	AT3G17860.1	19309455

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU2Hr1G031310.9	Barley	cytosol, mitochondrion, plastid	64.75	66.11
TraesCS2B01G195600.1	Wheat	plastid	57.79	61.04
TraesCS2D01G176800.1	Wheat	plastid	56.97	60.17
Zm00001d022139_P001	Maize	plastid	55.33	57.94
EER97533	Sorghum	plastid	54.92	57.02
TraesCS2A01G169300.1	Wheat	plastid	51.23	54.11
Os03t0402800-01	Rice	plastid	45.08	48.25
Zm00001d006860_P001	Maize	plastid	51.64	47.37
GSMUA_Achr2P21770_001	Banana	mitochondrion	35.66	39.37
Solyc07g042170.2.1	Tomato	cytosol	31.97	36.11
PGSC0003DMT400075155	Potato	nucleus	30.74	34.88
GSMUA_Achr3P02140_001	Banana	mitochondrion	29.51	34.45
GSMUA_Achr8P16780_001	Banana	cytosol	34.84	33.6
GSMUA_Achr11P...	Banana	cytosol	30.33	31.9
Bra016520.1-P	Field mustard	plastid	32.79	30.89
CDY26697	Canola	plastid	31.97	30.83
Bra025713.1-P	Field mustard	plastid	31.97	30.71
CDX96675	Canola	plastid	32.79	30.42
CDY41023	Canola	plastid	31.56	30.32
CDX83781	Canola	plastid	32.79	30.3
VIT_11s0016g00710.t01	Wine grape	cytosol, plastid	33.2	30.22
Os09t0439200-01	Rice	plastid	28.69	30.17
CDY37269	Canola	nucleus	29.51	30.0
AT1G74950.1	Thale cress	cytosol	30.33	29.72
CDY46022	Canola	nucleus	29.1	29.58
PGSC0003DMT400007592	Potato	nucleus	30.74	29.53
Solyc12g009220.1.1	Tomato	nucleus	30.33	29.37
Bra008172.1-P	Field mustard	nucleus	28.69	29.17
CDX73127	Canola	cytosol	29.1	28.98
Bra031065.1-P	Field mustard	plastid	32.38	28.94
CDY45408	Canola	cytosol	28.69	28.57
Bra015880.1-P	Field mustard	cytosol	28.69	28.57
CDX73289	Canola	cytosol	21.72	28.19
Bra003778.1-P	Field mustard	cytosol	25.41	27.93
AT1G19180.1	Thale cress	cytosol	28.69	27.67
CDX68156	Canola	cytosol	20.49	27.62
CDX85865	Canola	cytosol	24.18	26.34
GSMUA_Achr1P21870_001	Banana	mitochondrion	37.7	26.06
Os04t0653000-01	Rice	cytosol, nucleus, plastid	22.95	25.93
CDX81917	Canola	plastid	31.56	15.16
CDY21679	Canola	plastid	31.97	14.31

Protein Annotations

MapMan:11.7.2.1.2	MapMan:15.5.45	EntrezGene:4343899	EMBL:AK068566	ProteinID:BAC16504.1	ProteinID:BAF22182.1
ProteinID:BAT02643.1	InterPro:CCT_CS	GO:GO:0003674	GO:GO:0003714	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351
GO:GO:0006355	GO:GO:0006950	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009611	GO:GO:0009719	GO:GO:0009987	GO:GO:0031347	GO:GO:1903507
GO:GO:2000022	InterPro:IPR010399	EnsemblPlantsGene:Os07g0615200	EnsemblPlants:Os07t0615200-01	PFAM:PF06200	PFAM:PF09425
PFscan:PS51320	PANTHER:PTHR33077	PANTHER:PTHR33077:SF19	UniProt:Q8H395	SMART:SM00979	InterPro:Tify_dom
UniParc:UPI00000AD851	RefSeq:XP_015647536.1	SEG:seg	:	:	:

Description

TIFY GENE 10BTify domain containing protein. (Os07t0615200-01)

Coordinates

chr7:+:25348060..25350242

Molecular Weight (calculated)

25540.4 Da

IEP (calculated)

10.076

GRAVY (calculated)

-0.431

Length

244 amino acids

Sequence
(BLAST)

001: MAASARPVGV GGERATSFAM ACSLLSRYVR QNGAAAAELG LGIRGEGEAP RAAPATMSLL PGEAERKKET MELFPQSAGF GQQDAITADS AADAREQEPE
101: KRQLTIFYGG KVLVFNDFPA DKAKGLMQLA SKGSPVAPQN AAAPAPAAVT DNTKAPMAVP APVSSLPTAQ ADAQKPARAN ASDMPIARKA SLHRFLEKRK
201: DRLNAKTPYQ ASPSDATPVK KEPESQPWLG LGPNAVVKPI ERGQ

Best Arabidopsis Sequence Match ( AT1G19180.3 )
(BLAST)

001: MSSSMECSEF VGSRRFTGKK PSFSQTCSRL SQYLKENGSF GDLSLGMACK PDVNGTLGNS RQPTTTMSLF PCEASNMDSM VQDVKPTNLF PRQPSFSSSS
101: SSLPKEDVLK MTQTTRSVKP ESQTAPLTIF YAGQVIVFND FSAEKAKEVI NLASKGTANS LAKNQTDIRS NIATIANQVP HPRKTTTQEP IQSSPTPLTE
201: LPIARRASLH RFLEKRKDRV TSKAPYQLCD PAKASSNPQT TGNMSWLGLA AEI

Arabidopsis Description

TIFY10ATIFY10A [Source:UniProtKB/TrEMBL;Acc:A0A178W7G1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.