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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • nucleus 4
  • plastid 4
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:mitochondrion, nucleus, plastid
BaCelLo:nucleus
ChloroP:plastid
iPSORT:mitochondrion
MultiLoc:plastid
Plant-mPloc:nucleus
PProwler:plastid
TargetP:plastid
WoLF PSORT:nucleus
YLoc:nucleus
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra016520.1-P Field mustard plastid 74.73 78.76
Bra025713.1-P Field mustard plastid 66.3 71.26
Bra008172.1-P Field mustard nucleus 46.89 53.33
Bra015880.1-P Field mustard cytosol 45.79 51.02
Bra003778.1-P Field mustard cytosol 35.16 43.24
VIT_11s0016g00710.t01 Wine grape cytosol, plastid 40.29 41.04
CDY21679 Canola plastid 81.69 40.92
Solyc07g042170.2.1 Tomato cytosol 31.5 39.81
PGSC0003DMT400075155 Potato nucleus 30.4 38.6
Solyc12g009220.1.1 Tomato nucleus 32.23 34.92
GSMUA_Achr2P21770_001 Banana mitochondrion 27.84 34.39
PGSC0003DMT400007592 Potato nucleus 30.77 33.07
Zm00001d022139_P001 Maize plastid 27.84 32.62
GSMUA_Achr6P31050_001 Banana cytosol 25.27 32.39
Os07t0615200-01 Rice mitochondrion 28.94 32.38
EER97533 Sorghum plastid 27.84 32.34
TraesCS2B01G195600.1 Wheat plastid 26.74 31.6
HORVU2Hr1G031310.9 Barley cytosol, mitochondrion, plastid 27.47 31.38
TraesCS2D01G176800.1 Wheat plastid 26.37 31.17
GSMUA_Achr5P22110_001 Banana mitochondrion 27.84 30.77
GSMUA_Achr9P14370_001 Banana cytosol 29.3 30.19
EER92157 Sorghum plastid 24.91 29.82
Os09t0439200-01 Rice plastid 25.27 29.74
GSMUA_Achr3P02140_001 Banana mitochondrion 22.71 29.67
EER98969 Sorghum cytosol 23.81 29.41
Zm00001d029448_P001 Maize cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole 24.54 29.39
TraesCS2A01G169300.1 Wheat plastid 24.54 29.0
Os03t0402800-01 Rice plastid 24.18 28.95
GSMUA_Achr3P05920_001 Banana nucleus 26.37 28.69
TraesCS5D01G219300.2 Wheat nucleus 23.81 28.26
TraesCS5B01G211000.1 Wheat nucleus 23.81 28.26
GSMUA_Achr11P... Banana cytosol 23.81 28.02
Zm00001d006860_P001 Maize plastid 27.11 27.82
Zm00001d005813_P002 Maize cytosol, plastid 23.08 27.75
GSMUA_Achr7P19850_001 Banana cytosol 24.54 27.69
GSMUA_Achr3P10270_001 Banana cytosol 22.71 27.43
GSMUA_Achr5P05170_001 Banana cytosol, mitochondrion, nucleus 24.18 27.39
GSMUA_Achr8P16780_001 Banana cytosol 25.27 27.27
GSMUA_Achr10P... Banana cytosol 16.12 27.16
GSMUA_AchrUn_... Banana nucleus 24.54 27.13
Zm00001d020614_P001 Maize cytosol, plastid 20.88 26.15
Bra016604.1-P Field mustard nucleus 24.54 24.81
Bra016056.1-P Field mustard nucleus 23.08 22.99
GSMUA_Achr1P21870_001 Banana mitochondrion 29.3 22.66
Bra025977.1-P Field mustard nucleus 21.25 22.66
Bra002338.1-P Field mustard cytosol 16.48 22.39
TraesCS5A01G212800.1 Wheat plastid 23.81 21.96
Bra020135.1-P Field mustard cytosol 17.58 21.72
HORVU5Hr1G062290.6 Barley mitochondrion, plastid 23.08 21.36
Bra008033.1-P Field mustard nucleus 21.25 21.25
Bra030986.1-P Field mustard nucleus 22.71 20.74
Protein Annotations
EnsemblPlants:Bra031065.1EnsemblPlants:Bra031065.1-PEnsemblPlantsGene:Bra031065InterPro:CCT_CSInterPro:IPR010399InterPro:Tify_dom
PANTHER:PTHR33077PANTHER:PTHR33077:SF13PFAM:PF06200PFAM:PF09425PFscan:PS51320SEG:seg
SMART:SM00979UniParc:UPI00025429F1UniProt:M4EQJ4MapMan:15.5.45::
Description
AT1G74950 (E=7e-073) JAZ2, TIFY10B | TIFY10B
Coordinates
chrA09:-:32662833..32664240
Molecular Weight (calculated)
29812.3 Da
IEP (calculated)
10.003
GRAVY (calculated)
-0.549
Length
273 amino acids
Sequence
(BLAST)
001: MSSPMESSDF AATRRFSRKP SFSQTCSRLS QYLKENGSFG DLSLGMACKP EVNGISRQPT TTMSLFPCEA SNMEPIGQDV KPKNLFPRQP SFSSSSSSLP
101: KEDILKMTQA TSSTRSVKPE PQTAPLTIFY GGQVIVFNDF SAEKAKEVMD LASKGTANTF TGFTSNVNNN IQSVYTTNLA NNQTEMRSNI APIPNQLPHL
201: MKTTTQNPVQ SSSTAMACEL PIARRASLHR FLAKRKDRVT SKAPYQLNDP AKASSKPQTG DNTTSWLGLA AEM
Best Arabidopsis Sequence Match ( AT1G19180.3 )
(BLAST)
001: MSSSMECSEF VGSRRFTGKK PSFSQTCSRL SQYLKENGSF GDLSLGMACK PDVNGTLGNS RQPTTTMSLF PCEASNMDSM VQDVKPTNLF PRQPSFSSSS
101: SSLPKEDVLK MTQTTRSVKP ESQTAPLTIF YAGQVIVFND FSAEKAKEVI NLASKGTANS LAKNQTDIRS NIATIANQVP HPRKTTTQEP IQSSPTPLTE
201: LPIARRASLH RFLEKRKDRV TSKAPYQLCD PAKASSNPQT TGNMSWLGLA AEI
Arabidopsis Description
TIFY10ATIFY10A [Source:UniProtKB/TrEMBL;Acc:A0A178W7G1]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.