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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 6
  • cytosol 2
  • nucleus 2
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:cytosol, nucleus, plastid
BaCelLo:plastid
ChloroP:plastid
EpiLoc:cytosol
iPSORT:plastid
MultiLoc:plastid
Plant-mPloc:nucleus
PProwler:plastid
TargetP:plastid
WoLF PSORT:nucleus
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX96675 Canola plastid 92.28 90.87
Bra031065.1-P Field mustard plastid 78.76 74.73
Bra025713.1-P Field mustard plastid 67.18 68.5
Bra008172.1-P Field mustard nucleus 46.72 50.42
Bra015880.1-P Field mustard cytosol 46.33 48.98
Bra003778.1-P Field mustard cytosol 35.91 41.89
VIT_11s0016g00710.t01 Wine grape cytosol, plastid 42.08 40.67
Solyc07g042170.2.1 Tomato cytosol 32.43 38.89
PGSC0003DMT400075155 Potato nucleus 31.66 38.14
PGSC0003DMT400007592 Potato nucleus 32.43 33.07
Solyc12g009220.1.1 Tomato nucleus 32.05 32.94
Os07t0615200-01 Rice mitochondrion 30.89 32.79
GSMUA_Achr2P21770_001 Banana mitochondrion 27.8 32.58
GSMUA_Achr6P31050_001 Banana cytosol 26.64 32.39
EER97533 Sorghum plastid 28.57 31.49
Zm00001d022139_P001 Maize plastid 28.19 31.33
HORVU2Hr1G031310.9 Barley cytosol, mitochondrion, plastid 28.57 30.96
TraesCS2B01G195600.1 Wheat plastid 27.41 30.74
TraesCS2D01G176800.1 Wheat plastid 27.03 30.3
EER92157 Sorghum plastid 26.64 30.26
Zm00001d029448_P001 Maize cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole 26.25 29.82
GSMUA_Achr9P14370_001 Banana cytosol 30.5 29.81
GSMUA_Achr3P05920_001 Banana nucleus 28.57 29.48
Os03t0402800-01 Rice plastid 25.87 29.39
GSMUA_Achr3P02140_001 Banana mitochondrion 23.55 29.19
GSMUA_Achr5P22110_001 Banana mitochondrion 27.41 28.74
TraesCS5B01G211000.1 Wheat nucleus 25.48 28.7
TraesCS2A01G169300.1 Wheat plastid 25.48 28.57
EER98969 Sorghum cytosol 24.32 28.51
GSMUA_Achr11P... Banana cytosol 25.1 28.02
GSMUA_AchrUn_... Banana nucleus 26.64 27.94
TraesCS5D01G219300.2 Wheat nucleus 24.71 27.83
Zm00001d006860_P001 Maize plastid 28.19 27.44
GSMUA_Achr5P05170_001 Banana cytosol, mitochondrion, nucleus 25.48 27.39
GSMUA_Achr8P16780_001 Banana cytosol 26.64 27.27
GSMUA_Achr7P19850_001 Banana cytosol 25.48 27.27
Zm00001d005813_P002 Maize cytosol, plastid 23.55 26.87
Os09t0439200-01 Rice plastid 23.94 26.72
Zm00001d020614_P001 Maize cytosol, plastid 22.39 26.61
GSMUA_Achr3P10270_001 Banana cytosol 22.78 26.11
GSMUA_Achr10P... Banana cytosol 16.22 25.93
Bra016604.1-P Field mustard nucleus 24.71 23.7
Bra020135.1-P Field mustard cytosol 19.69 23.08
Bra002338.1-P Field mustard cytosol 17.76 22.89
TraesCS5A01G212800.1 Wheat plastid 25.48 22.3
GSMUA_Achr1P21870_001 Banana mitochondrion 30.12 22.1
Bra025977.1-P Field mustard nucleus 21.62 21.88
Bra008033.1-P Field mustard nucleus 22.78 21.61
HORVU5Hr1G062290.6 Barley mitochondrion, plastid 24.32 21.36
Bra016056.1-P Field mustard nucleus 21.62 20.44
Bra030986.1-P Field mustard nucleus 23.55 20.4
Protein Annotations
EnsemblPlants:Bra016520.1EnsemblPlants:Bra016520.1-PEnsemblPlantsGene:Bra016520InterPro:CCT_CSInterPro:IPR010399InterPro:Tify_dom
PANTHER:PTHR33077PFAM:PF06200PFAM:PF09425PFscan:PS51320SEG:segSMART:SM00979
UniParc:UPI0002546F27UniProt:M4DJ42MapMan:11.7.2.1.2MapMan:15.5.45::
Description
AT1G19180 (E=8e-087) JAZ1, TIFY10A | JAZ1 (JASMONATE-ZIM-DOMAIN PROTEIN 1); protein binding
Coordinates
chrA08:-:18857930..18859054
Molecular Weight (calculated)
28311.7 Da
IEP (calculated)
9.989
GRAVY (calculated)
-0.463
Length
259 amino acids
Sequence
(BLAST)
001: MMSSSMECSD SAATRRFSRK PSFSLTCSRL SQYLKENGSF GDLSLGMSCK PEVNGISRQP TTTMSLFPCE AAQDVKPKNL FPRQPSFSSS SSSLPKKEEV
101: LKMTQTTTTR SVRPEPQTAP LTIFYNGEVI VFNDFSAEKA KEVMDLASKG TANSFTGFTS TVNLPKYQTE VRTNISPTLD QVTHLMKPAA QEPILSSSAA
201: MACELPIARR ASLHRFLAKR KDRVTSKAPY QLSDPAKASS KPQTGDNNTT SWLGLAAQI
Best Arabidopsis Sequence Match ( AT1G19180.3 )
(BLAST)
001: MSSSMECSEF VGSRRFTGKK PSFSQTCSRL SQYLKENGSF GDLSLGMACK PDVNGTLGNS RQPTTTMSLF PCEASNMDSM VQDVKPTNLF PRQPSFSSSS
101: SSLPKEDVLK MTQTTRSVKP ESQTAPLTIF YAGQVIVFND FSAEKAKEVI NLASKGTANS LAKNQTDIRS NIATIANQVP HPRKTTTQEP IQSSPTPLTE
201: LPIARRASLH RFLEKRKDRV TSKAPYQLCD PAKASSNPQT TGNMSWLGLA AEI
Arabidopsis Description
TIFY10ATIFY10A [Source:UniProtKB/TrEMBL;Acc:A0A178W7G1]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.