Subcellular Localization
min:
: max
Winner_takes_all: extracellular, endoplasmic reticulum, vacuole, mitochondrion, plastid, cytosol, plasma membrane, golgi
Predictor Summary:
Predictor Summary:
- mitochondrion 3
- plastid 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER92157 | Sorghum | plastid | 65.79 | 65.79 |
| Os03t0402800-01 | Rice | plastid | 60.53 | 60.53 |
| Zm00001d022139_P001 | Maize | plastid | 49.56 | 48.5 |
| Zm00001d006860_P001 | Maize | plastid | 45.18 | 38.72 |
| GSMUA_Achr11P... | Banana | cytosol | 38.16 | 37.5 |
| GSMUA_Achr2P21770_001 | Banana | mitochondrion | 35.09 | 36.2 |
| GSMUA_Achr3P02140_001 | Banana | mitochondrion | 31.58 | 34.45 |
| Solyc07g042170.2.1 | Tomato | cytosol | 30.7 | 32.41 |
| GSMUA_Achr8P16780_001 | Banana | cytosol | 35.53 | 32.02 |
| CDX68156 | Canola | cytosol | 25.0 | 31.49 |
| Zm00001d005813_P002 | Maize | cytosol, plastid | 31.14 | 31.28 |
| CDY46022 | Canola | nucleus | 32.46 | 30.83 |
| PGSC0003DMT400075155 | Potato | nucleus | 28.95 | 30.7 |
| Bra008172.1-P | Field mustard | nucleus | 32.02 | 30.42 |
| Zm00001d020614_P001 | Maize | cytosol, plastid | 28.95 | 30.28 |
| CDX73289 | Canola | cytosol | 23.68 | 28.72 |
| Zm00001d044708_P001 | Maize | cytosol, extracellular, plastid | 18.86 | 28.67 |
| CDX85865 | Canola | cytosol | 28.07 | 28.57 |
| CDX73127 | Canola | cytosol | 30.26 | 28.16 |
| Bra003778.1-P | Field mustard | cytosol | 27.19 | 27.93 |
| CDY45408 | Canola | cytosol | 29.82 | 27.76 |
| Bra015880.1-P | Field mustard | cytosol | 29.82 | 27.76 |
| VIT_11s0016g00710.t01 | Wine grape | cytosol, plastid | 31.58 | 26.87 |
| CDY37269 | Canola | nucleus | 28.07 | 26.67 |
| CDX96675 | Canola | plastid | 30.7 | 26.62 |
| Zm00001d033972_P002 | Maize | cytosol, extracellular, plastid | 20.18 | 26.59 |
| Bra016520.1-P | Field mustard | plastid | 29.82 | 26.25 |
| CDX83781 | Canola | plastid | 30.26 | 26.14 |
| CDY41023 | Canola | plastid | 28.95 | 25.98 |
| Solyc12g009220.1.1 | Tomato | nucleus | 28.51 | 25.79 |
| AT1G74950.1 | Thale cress | cytosol | 28.07 | 25.7 |
| CDY26697 | Canola | plastid | 28.51 | 25.69 |
| Bra025713.1-P | Field mustard | plastid | 28.07 | 25.2 |
| PGSC0003DMT400007592 | Potato | nucleus | 27.63 | 24.8 |
| Bra031065.1-P | Field mustard | plastid | 29.39 | 24.54 |
| AT1G19180.1 | Thale cress | cytosol | 27.19 | 24.51 |
| GSMUA_Achr1P21870_001 | Banana | mitochondrion | 34.65 | 22.38 |
| Zm00001d021924_P001 | Maize | plastid | 13.16 | 21.9 |
| Zm00001d046270_P001 | Maize | plastid | 13.16 | 21.9 |
| Zm00001d026477_P002 | Maize | nucleus | 20.61 | 20.43 |
| Zm00001d002029_P003 | Maize | nucleus | 19.3 | 20.37 |
| Zm00001d013855_P002 | Maize | plastid | 14.47 | 14.41 |
| CDX81917 | Canola | plastid | 31.14 | 13.98 |
| CDY21679 | Canola | plastid | 30.26 | 12.66 |
Protein Annotations
| EMBL:BT061825 | EMBL:KU512857 | EnsemblPlants:Zm00001d029448_P001 | EnsemblPlants:Zm00001d029448_T001 | EnsemblPlantsGene:Zm00001d029448 | EntrezGene:100276585 |
| InterPro:CCT_CS | InterPro:IPR010399 | InterPro:Tify_dom | PANTHER:PTHR33077 | PANTHER:PTHR33077:SF9 | PFAM:PF06200 |
| PFAM:PF09425 | PFscan:PS51320 | ProteinID:ONL98775.1 | SEG:seg | SMART:SM00979 | UniParc:UPI0001948B0B |
| UniProt:C0HHL9 | MapMan:11.7.2.1.2 | MapMan:15.5.45 | : | : | : |
Description
ZIM-transcription factor 24Protein TIFY 10B
Coordinates
chr1:-:71161670..71164215
Molecular Weight (calculated)
23976.5 Da
IEP (calculated)
8.426
GRAVY (calculated)
-0.419
Length
228 amino acids
Sequence
(BLAST)
(BLAST)
001: MAPAESGEKA TSFAMACSLL SRYVRQNGAA AADLGLAIRA ESDAKRTSTD MEKGETGKET MDLFPQIAGF GSEAATKEAP DAREPEKRQL TIFYGGKVLV
101: FDDFPAEKAK DLMQMASKGS PVAQNPGLLP PSTAATVTDS TKIAAVPAAP IAVANAQKSA ADIPQAPKAS LRRFLEKRKD RLTAKAPYPG SPSDVTPVKK
201: EMSDGQPWLG LGPQIANPDL SLSKEASQ
101: FDDFPAEKAK DLMQMASKGS PVAQNPGLLP PSTAATVTDS TKIAAVPAAP IAVANAQKSA ADIPQAPKAS LRRFLEKRKD RLTAKAPYPG SPSDVTPVKK
201: EMSDGQPWLG LGPQIANPDL SLSKEASQ
001: MSSSMECSEF VGSRRFTGKK PSFSQTCSRL SQYLKENGSF GDLSLGMACK PDVNGTLGNS RQPTTTMSLF PCEASNMDSM VQDVKPTNLF PRQPSFSSSS
101: SSLPKEDVLK MTQTTRSVKP ESQTAPLTIF YAGQVIVFND FSAEKAKEVI NLASKGTANS LAKNQTDIRS NIATIANQVP HPRKTTTQEP IQSSPTPLTE
201: LPIARRASLH RFLEKRKDRV TSKAPYQLCD PAKASSNPQT TGNMSWLGLA AEI
101: SSLPKEDVLK MTQTTRSVKP ESQTAPLTIF YAGQVIVFND FSAEKAKEVI NLASKGTANS LAKNQTDIRS NIATIANQVP HPRKTTTQEP IQSSPTPLTE
201: LPIARRASLH RFLEKRKDRV TSKAPYQLCD PAKASSNPQT TGNMSWLGLA AEI
Arabidopsis Description
TIFY10ATIFY10A [Source:UniProtKB/TrEMBL;Acc:A0A178W7G1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.