Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER95129 | Sorghum | cytosol | 94.92 | 94.92 |
| Zm00001d047848_P001 | Maize | cytosol | 94.75 | 94.75 |
| Os03t0265500-01 | Rice | plasma membrane | 83.42 | 83.7 |
| TraesCS4D01G214200.1 | Wheat | cytosol | 81.73 | 82.42 |
| TraesCS4A01G091200.1 | Wheat | cytosol | 81.05 | 81.74 |
| HORVU4Hr1G060950.3 | Barley | cytosol | 80.71 | 81.4 |
| TraesCS4B01G213500.1 | Wheat | cytosol | 80.37 | 81.06 |
| GSMUA_Achr6P33630_001 | Banana | cytosol, mitochondrion, nucleus | 66.67 | 67.58 |
| GSMUA_Achr5P28930_001 | Banana | cytosol | 63.45 | 66.96 |
| GSMUA_Achr9P03690_001 | Banana | cytosol | 65.99 | 64.68 |
| Zm00001d010082_P001 | Maize | cytosol | 62.44 | 61.6 |
| Zm00001d042833_P001 | Maize | cytosol | 61.25 | 60.54 |
| Zm00001d012338_P001 | Maize | cytosol | 60.91 | 60.4 |
| Zm00001d038273_P001 | Maize | cytosol | 60.91 | 60.1 |
| VIT_13s0019g03380.t01 | Wine grape | cytosol | 59.73 | 59.03 |
| KRH73146 | Soybean | cytosol | 56.85 | 57.53 |
| KRH14993 | Soybean | cytosol | 54.99 | 57.22 |
| KRG97777 | Soybean | cytosol | 56.51 | 56.61 |
| KRH31107 | Soybean | cytosol | 56.35 | 56.44 |
| GSMUA_Achr8P02350_001 | Banana | cytosol | 16.41 | 56.4 |
| Solyc05g052620.2.1 | Tomato | cytosol | 55.67 | 54.56 |
| CDY24941 | Canola | cytosol | 53.98 | 54.07 |
| Bra000156.1-P | Field mustard | cytosol | 53.81 | 53.9 |
| AT2G39940.1 | Thale cress | cytosol | 53.81 | 53.72 |
| CDY20501 | Canola | cytosol | 53.3 | 52.33 |
| Bra005000.1-P | Field mustard | cytosol | 53.13 | 52.07 |
| CDX74819 | Canola | cytosol | 52.79 | 52.0 |
| CDX93223 | Canola | cytosol | 50.42 | 50.42 |
| CDX93225 | Canola | cytosol | 50.08 | 49.83 |
| CDY07041 | Canola | cytosol | 49.58 | 49.49 |
| CDY07040 | Canola | cytosol | 50.76 | 49.42 |
| Bra017045.1-P | Field mustard | cytosol | 50.76 | 49.42 |
| Bra017044.1-P | Field mustard | cytosol | 49.58 | 48.51 |
| CDY60996 | Canola | endoplasmic reticulum, golgi | 53.64 | 45.09 |
| Zm00001d003911_P003 | Maize | cytosol | 29.1 | 29.91 |
| Zm00001d048233_P001 | Maize | cytosol | 30.12 | 29.77 |
| Zm00001d027975_P001 | Maize | cytosol | 29.95 | 29.6 |
| Zm00001d007357_P005 | Maize | cytosol | 28.43 | 29.32 |
| Zm00001d025268_P001 | Maize | cytosol | 28.26 | 29.14 |
| Zm00001d010863_P001 | Maize | plastid | 28.43 | 28.47 |
| Zm00001d052188_P001 | Maize | plastid | 30.8 | 27.33 |
| Zm00001d018126_P001 | Maize | plastid | 29.78 | 26.47 |
Protein Annotations
| EMBL:BT066159 | EnsemblPlants:Zm00001d028543_P001 | EnsemblPlants:Zm00001d028543_T001 | EnsemblPlantsGene:Zm00001d028543 | EntrezGene:100383088 | Gene3D:1.20.1280.50 |
| Gene3D:3.80.10.10 | InterPro:IPR032675 | InterPro:LRR_dom_sf | PANTHER:PTHR43944 | PANTHER:PTHR43944:SF2 | ProteinID:ONL96323.1 |
| SEG:seg | SUPFAM:SSF52047 | UniParc:UPI000194AFF7 | UniProt:C0PCZ0 | MapMan:11.7.2.1.1 | : |
Description
Coronatine-insensitive protein 1
Coordinates
chr1:+:38734079..38737199
Molecular Weight (calculated)
66636.6 Da
IEP (calculated)
6.759
GRAVY (calculated)
-0.138
Length
591 amino acids
Sequence
(BLAST)
(BLAST)
001: MGGEAEGGER RLGRVLSFGI PDTALGLVMG YVEDPWDRDA ISLVCRHWCR VDALSRKHVT VAMAYSTTPE RLFGRFPCLE SLKLKAKPRA AMFNLISDDW
101: GGSASPWIRQ LSATFHSLKK LHLRRMIVSN DDINTLVRAK AHMLVSLKLD RCSGFSTPSI ALIARSCRKL ETLFLEESMI DEKENDEWIR ELATSNSVLE
201: TLNFFQTDLR ASPEYLTLLV RNCQRLKTLK ISECFMPDLV SLFRTAQTLQ EFAGGSFEDQ GQPVAGRNYE NYYFPPLLHR LSLLYMGTNE MQILFPYAAA
301: LKKLDLQFTF LSTEDHCQIV QRCPNLETLE VRDVIGDRGL QVVAETCKKL QRLRVERGDD DQGGLEDEQG RISQVGVMAI AQGCPELTYW AIYVSDITNA
401: ALEAVGTCSR NLNDFRLVLL DREAHITELP LDNGVRALLR GCTKLRRFAF YVRPGVLSDV GLGYVGEFSK SIRYMLLGNV GESDNGIIQL SKGCPSLQKL
501: ELRGCLFSEH ALAMAALELK SLRYLWVQGF RSSPTGTDLM AMVRPFWNIE YILPDQDEPC PEYKKQILAY YSLAGRRTDC PPSVTPLYPA V
101: GGSASPWIRQ LSATFHSLKK LHLRRMIVSN DDINTLVRAK AHMLVSLKLD RCSGFSTPSI ALIARSCRKL ETLFLEESMI DEKENDEWIR ELATSNSVLE
201: TLNFFQTDLR ASPEYLTLLV RNCQRLKTLK ISECFMPDLV SLFRTAQTLQ EFAGGSFEDQ GQPVAGRNYE NYYFPPLLHR LSLLYMGTNE MQILFPYAAA
301: LKKLDLQFTF LSTEDHCQIV QRCPNLETLE VRDVIGDRGL QVVAETCKKL QRLRVERGDD DQGGLEDEQG RISQVGVMAI AQGCPELTYW AIYVSDITNA
401: ALEAVGTCSR NLNDFRLVLL DREAHITELP LDNGVRALLR GCTKLRRFAF YVRPGVLSDV GLGYVGEFSK SIRYMLLGNV GESDNGIIQL SKGCPSLQKL
501: ELRGCLFSEH ALAMAALELK SLRYLWVQGF RSSPTGTDLM AMVRPFWNIE YILPDQDEPC PEYKKQILAY YSLAGRRTDC PPSVTPLYPA V
001: MNYFPDEVIE HVFDFVASHK DRNSISLVCK SWHKIERFSR KEVFIGNCYA INPERLIRRF PCLKSLTLKG KPHFADFNLV PHEWGGFVHP WIEALARSRV
101: GLEELRLKRM VVTDESLDLL SRSFANFKSL VLVSCEGFTT DGLASIAANC RHLRELDLQE NEIDDHRGQW LNCFPDSCTT LMSLNFACLK GETNVAALER
201: LVARSPNLKS LKLNRAVPLD ALARLMSCAP QLVDLGVGSY ENEPDPESFA KLMTAIKKYT SLRSLSGFLE VAPLCLPAFY PICQNLISLN LSYAAEIQGN
301: HLIKLIQLCK RLQRLWILDS IGDKGLAVVA ATCKELQELR VFPSDVHGEE DNNASVTEVG LVAISAGCPK LHSILYFCKQ MTNAALIAVA KNCPNFIRFR
401: LCILEPHKPD HITFQSLDEG FGAIVQACKG LRRLSVSGLL TDQVFLYIGM YAEQLEMLSI AFAGDTDKGM LYVLNGCKKM RKLEIRDSPF GNAALLADVG
501: RYETMRSLWM SSCEVTLGGC KRLAQNSPRL NVEIINENEN NGMEQNEEDE REKVDKLYLY RTVVGTRKDA PPYVRIL
101: GLEELRLKRM VVTDESLDLL SRSFANFKSL VLVSCEGFTT DGLASIAANC RHLRELDLQE NEIDDHRGQW LNCFPDSCTT LMSLNFACLK GETNVAALER
201: LVARSPNLKS LKLNRAVPLD ALARLMSCAP QLVDLGVGSY ENEPDPESFA KLMTAIKKYT SLRSLSGFLE VAPLCLPAFY PICQNLISLN LSYAAEIQGN
301: HLIKLIQLCK RLQRLWILDS IGDKGLAVVA ATCKELQELR VFPSDVHGEE DNNASVTEVG LVAISAGCPK LHSILYFCKQ MTNAALIAVA KNCPNFIRFR
401: LCILEPHKPD HITFQSLDEG FGAIVQACKG LRRLSVSGLL TDQVFLYIGM YAEQLEMLSI AFAGDTDKGM LYVLNGCKKM RKLEIRDSPF GNAALLADVG
501: RYETMRSLWM SSCEVTLGGC KRLAQNSPRL NVEIINENEN NGMEQNEEDE REKVDKLYLY RTVVGTRKDA PPYVRIL
Arabidopsis Description
AFB3Protein AUXIN SIGNALING F-BOX 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LPW7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.