Factsheet for Zm00001d027975_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, secretory
MultiLoc:	cytosol
PProwler:	secretory
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d005003_P002
Zm00001d008278_P001
Zm00001d010649_P001
Zm00001d028948_P001
Zm00001d033980_P001
Zm00001d038543_P004
Zm00001d038545_P001
Zm00001d041430_P001
Zm00001d043144_P001
Zm00001d047597_P001
Zm00001d052415_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G24390.1	Zm00001d005003_P002	AT2G41090.1	17360592
AT4G24390.1	Zm00001d008278_P001	AT2G41090.1	17360592
AT4G24390.1	Zm00001d010649_P001	AT2G41090.1	17360592
AT4G24390.1	Zm00001d028948_P001	AT2G41090.1	17360592
AT4G24390.1	Zm00001d038543_P004	AT2G41090.1	17360592
AT4G24390.1	Zm00001d038545_P001	AT2G41090.1	17360592
AT4G24390.1	Zm00001d041430_P001	AT2G41090.1	17360592
AT4G24390.1	Zm00001d043144_P001	AT2G41090.1	17360592
AT4G24390.1	Zm00001d047597_P001	AT2G41090.1	17360592
AT4G24390.1	Zm00001d052415_P001	AT2G41090.1	17360592
AT4G24390.1	Zm00001d005003_P002	AT2G41100.1	17360592
AT4G24390.1	Zm00001d008278_P001	AT2G41100.1	17360592
AT4G24390.1	Zm00001d010649_P001	AT2G41100.1	17360592
AT4G24390.1	Zm00001d028948_P001	AT2G41100.1	17360592
AT4G24390.1	Zm00001d038543_P004	AT2G41100.1	17360592
AT4G24390.1	Zm00001d038545_P001	AT2G41100.1	17360592
AT4G24390.1	Zm00001d041430_P001	AT2G41100.1	17360592
AT4G24390.1	Zm00001d043144_P001	AT2G41100.1	17360592
AT4G24390.1	Zm00001d047597_P001	AT2G41100.1	17360592
AT4G24390.1	Zm00001d052415_P001	AT2G41100.1	17360592
AT4G24390.1	Zm00001d033980_P001	AT4G14640.1	17360592
AT4G24390.1	Zm00001d005003_P002	AT5G21274.1	17360592
AT4G24390.1	Zm00001d008278_P001	AT5G21274.1	17360592
AT4G24390.1	Zm00001d010649_P001	AT5G21274.1	17360592
AT4G24390.1	Zm00001d028948_P001	AT5G21274.1	17360592
AT4G24390.1	Zm00001d038543_P004	AT5G21274.1	17360592
AT4G24390.1	Zm00001d038545_P001	AT5G21274.1	17360592
AT4G24390.1	Zm00001d041430_P001	AT5G21274.1	17360592
AT4G24390.1	Zm00001d043144_P001	AT5G21274.1	17360592
AT4G24390.1	Zm00001d047597_P001	AT5G21274.1	17360592
AT4G24390.1	Zm00001d052415_P001	AT5G21274.1	17360592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER92735	Sorghum	cytosol	94.15	93.52
Zm00001d048233_P001	Maize	cytosol	92.64	92.64
Os03t0187500-01	Rice	cytosol	35.12	83.33
TraesCS4D01G301800.1	Wheat	cytosol, nucleus, peroxisome	79.77	78.2
TraesCS4A01G001800.1	Wheat	cytosol	79.26	77.96
HORVU4Hr1G078120.4	Barley	cytosol, plastid	78.6	68.92
GSMUA_Achr7P11780_001	Banana	cytosol	57.02	57.8
VIT_18s0001g07120.t01	Wine grape	cytosol	56.02	56.4
KRH52925	Soybean	cytosol	54.85	55.88
KRH62206	Soybean	cytosol	54.18	55.57
PGSC0003DMT400005419	Potato	cytosol	56.86	55.46
Solyc04g074980.2.1	Tomato	cytosol	57.19	54.9
CDY21439	Canola	cytosol	54.68	54.14
Bra000604.1-P	Field mustard	cytosol, plastid	54.52	53.71
CDX83172	Canola	cytosol, plastid	54.01	53.21
KRH72427	Soybean	cytosol	55.85	53.02
CDY03450	Canola	cytosol	53.51	52.46
Bra013798.1-P	Field mustard	cytosol	53.18	52.39
CDY34286	Canola	cytosol	53.34	52.38
AT5G49980.1	Thale cress	nucleus	53.51	51.7
AT4G24390.1	Thale cress	cytosol, plastid	53.68	51.52
KRH16819	Soybean	cytosol	55.02	51.41
Zm00001d052188_P001	Maize	plastid	56.69	50.9
Zm00001d018126_P001	Maize	plastid	56.35	50.68
Zm00001d007357_P005	Maize	cytosol	41.81	43.63
Zm00001d003911_P003	Maize	cytosol	41.81	43.48
Zm00001d025268_P001	Maize	cytosol	40.8	42.58
Zm00001d010863_P001	Maize	plastid	40.97	41.53
Zm00001d010082_P001	Maize	cytosol	30.1	30.05
Zm00001d038273_P001	Maize	cytosol	30.1	30.05
Zm00001d028543_P001	Maize	cytosol	29.6	29.95
Zm00001d012338_P001	Maize	cytosol	29.6	29.7
Zm00001d042833_P001	Maize	cytosol	29.43	29.43
Zm00001d047848_P001	Maize	cytosol	28.93	29.27

Protein Annotations

Gene3D:1.20.1280.50	EntrezGene:103631829	MapMan:11.2.2.1.1	MapMan:19.2.2.8.1.4.6	Gene3D:3.80.10.10	UniProt:A0A1D6JR35
InterPro:F-box-like_dom_sf	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR001611	InterPro:IPR032675
InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_Cys-con_subtyp	ProteinID:ONL94417.1	PFAM:PF13516	PANTHER:PTHR43944
PANTHER:PTHR43944:SF4	SMART:SM00367	SUPFAM:SSF52047	SUPFAM:SSF81383	UniParc:UPI000221F9AF	EnsemblPlantsGene:Zm00001d027975
EnsemblPlants:Zm00001d027975_P001	EnsemblPlants:Zm00001d027975_T001	SEG:seg	:	:	:

Description

F-box protein FBX14

Coordinates

chr1:-:18954240..18956944

Molecular Weight (calculated)

65684.7 Da

IEP (calculated)

5.772

GRAVY (calculated)

-0.040

Length

598 amino acids

Sequence
(BLAST)

001: MSEEDEDQPP AKRPSPSPPA DQVLDNVLET VLQFLDAPRD RSAASLVCRS WHSAESATRE SVAVRNLLAV SATRTARRFP NARSLLLKGR PRFADFNLLP
101: HGWDASAFRP WAAAVAAGAF PALTSLYLKR IPVTDADLDL LSRSLPASFR DLTLHLCDGF TSRGLASIAS HCRGLRVLDV VECDMAEEQE VVDWVAAFPQ
201: EPSNLESLSF ECYEPPVAFA ALEALVERSP RLRRLGVNLH VSLGQLCRLM AHAPRLSHLG TGSFRPADGG EEGTGFGEVV SAFVAAGRAR TLVSLSGFRD
301: LAQEYLPTIA VVCAHLKSLD LSYSAVTPNQ ILMFIGQCYN LETLWVLDSV RDEGLDAVGI SCKKLQSLRV LPLNAHEDAD ELVSEVGLTA ISRGCPALRS
401: ILYFCQTMTN AAVVDMSRNC PELKVFRLCI MGRHQPDHAT GEPMDEGFGA IVQNCSKLTR LSTSGQLTDR AFEYIGRHGK SLRTLSVAFA GNSDVALQYI
501: LQGCPKLEKL EIRDCPFGDA GLFAGMHHFY NMRFVWMSGC NLTLQGCKEV AQVLPRMVVE LINGQSDENE RNESVDILYM YRSLDGPRED VPPFVKIL

Best Arabidopsis Sequence Match ( AT4G24390.2 )
(BLAST)

001: MTEEDSSAKM SEDVEKYLNL NPPCSSSSSS SSAATFTNKS RNFKSSPPPC PDHVLENVLE NVLQFLTSRC DRNAVSLVCR SWYRVEAQTR LEVFIGNCYS
101: LSPARLIHRF KRVRSLVLKG KPRFADFNLM PPNWGAQFSP WVAATAKAYP WLEKVHLKRM FVTDDDLALL AESFPGFKEL TLVCCEGFGT SGIAIVANKC
201: RQLKVLDLME SEVTDDELDW ISCFPEGETH LESLSFDCVE SPINFKALEE LVVRSPFLKK LRTNRFVSLE ELHRLMVRAP QLTSLGTGSF SPDNVPQGEQ
301: QPDYAAAFRA CKSIVCLSGF REFRPEYLLA ISSVCANLTS LNFSYANISP HMLKPIISNC HNIRVFWALD SIRDEGLQAV AATCKELREL RIFPFDPRED
401: SEGPVSGVGL QAISEGCRKL ESILYFCQNM TNGAVTAMSE NCPQLTVFRL CIMGRHRPDH VTGKPMDDGF GAIVKNCKKL TRLAVSGLLT DEAFSYIGEY
501: GKLIRTLSVA FAGNSDKALR YVLEGCPKLQ KLEIRDSPFG DVGLRSGMHR YSNMRFVWLS SCLISRGGCR GVSHALPNVV VEVFGADGDD DEDTVTGDYV
601: ETLYLYRSLD GPRKDAPKFV TIL

Arabidopsis Description

FBX14F-box protein FBX14 [Source:UniProtKB/Swiss-Prot;Acc:Q8RWQ8]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.