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Maize
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Maize
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 3
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
Zm00001d003685_P001
Zm00001d005726_P001
Zm00001d005813_P002
Zm00001d006860_P001
Zm00001d010082_P001
Zm00001d012338_P001
Zm00001d020409_P002
Zm00001d020614_P001
Zm00001d022139_P001
Zm00001d024221_P001
Zm00001d025407_P001
Zm00001d028143_P002
Zm00001d028517_P001
Zm00001d028543_P001
Zm00001d029448_P001
Zm00001d032009_P001
Zm00001d035130_P001
Zm00001d038273_P001
Zm00001d042193_P001
Zm00001d042833_P001
Zm00001d047848_P001
Zm00001d049652_P001
Zm00001d050139_P001
Zm00001d050365_P006

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT2G39940.1 Zm00001d005813_P002 AT1G19180.1 17637677
AT2G39940.1 Zm00001d006860_P001 AT1G19180.1 17637677
AT2G39940.1 Zm00001d020614_P001 AT1G19180.1 17637677
AT2G39940.1 Zm00001d022139_P001 AT1G19180.1 17637677
AT2G39940.1 Zm00001d029448_P001 AT1G19180.1 17637677
AT2G39940.1 Zm00001d005813_P002 AT1G19180.1 18547396
AT2G39940.1 Zm00001d006860_P001 AT1G19180.1 18547396
AT2G39940.1 Zm00001d020614_P001 AT1G19180.1 18547396
AT2G39940.1 Zm00001d022139_P001 AT1G19180.1 18547396
AT2G39940.1 Zm00001d029448_P001 AT1G19180.1 18547396
AT2G39940.1 Zm00001d005813_P002 AT1G74950.1 18547396
AT2G39940.1 Zm00001d006860_P001 AT1G74950.1 18547396
AT2G39940.1 Zm00001d020614_P001 AT1G74950.1 18547396
AT2G39940.1 Zm00001d022139_P001 AT1G74950.1 18547396
AT2G39940.1 Zm00001d029448_P001 AT1G74950.1 18547396
AT2G39940.1 Zm00001d010082_P001 AT2G39940.1 12724535
AT2G39940.1 Zm00001d012338_P001 AT2G39940.1 12724535
AT2G39940.1 Zm00001d028543_P001 AT2G39940.1 12724535
AT2G39940.1 Zm00001d038273_P001 AT2G39940.1 12724535
AT2G39940.1 Zm00001d042833_P001 AT2G39940.1 12724535
AT2G39940.1 Zm00001d047848_P001 AT2G39940.1 12724535
AT2G39940.1 Zm00001d005726_P001 AT3G17860.1 17637675
AT2G39940.1 Zm00001d020409_P002 AT3G17860.1 17637675
AT2G39940.1 Zm00001d032009_P001 AT3G17860.1 17637675
AT2G39940.1 Zm00001d050365_P006 AT3G17860.1 17637675
AT2G39940.1 Zm00001d005726_P001 AT3G17860.1 18547396
AT2G39940.1 Zm00001d020409_P002 AT3G17860.1 18547396
AT2G39940.1 Zm00001d032009_P001 AT3G17860.1 18547396
AT2G39940.1 Zm00001d050365_P006 AT3G17860.1 18547396
AT2G39940.1 Zm00001d005726_P001 AT3G17860.1 19309455
AT2G39940.1 Zm00001d020409_P002 AT3G17860.1 19309455
AT2G39940.1 Zm00001d032009_P001 AT3G17860.1 19309455
AT2G39940.1 Zm00001d050365_P006 AT3G17860.1 19309455
AT2G39940.1 Zm00001d042193_P001 AT4G02570.1 12172031
AT2G39940.1 Zm00001d042193_P001 AT4G02570.1 12445118
AT2G39940.1 Zm00001d042193_P001 AT4G02570.1 12724535
AT2G39940.1 Zm00001d003685_P001 AT4G14110.1 12724535
AT2G39940.1 Zm00001d025407_P001 AT4G14110.1 12724535
AT2G39940.1 Zm00001d028517_P001 AT5G14250.1 12724535
AT2G39940.1 Zm00001d035130_P001 AT5G14250.1 12724535
AT2G39940.1 Zm00001d049652_P001 AT5G14250.1 12724535
AT2G39940.1 Zm00001d028143_P002 AT5G42970.1 12724535
AT2G39940.1 Zm00001d024221_P001 AT5G63110.1 12445118
AT2G39940.1 Zm00001d050139_P001 AT5G63110.1 12445118
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d028543_P001 Maize cytosol 94.75 94.75
Os03t0265500-01 Rice plasma membrane 83.08 83.36
TraesCS4D01G214200.1 Wheat cytosol 81.39 82.08
TraesCS4A01G091200.1 Wheat cytosol 81.05 81.74
HORVU4Hr1G060950.3 Barley cytosol 80.71 81.4
TraesCS4B01G213500.1 Wheat cytosol 80.2 80.89
GSMUA_Achr6P33630_001 Banana cytosol, mitochondrion, nucleus 65.99 66.9
GSMUA_Achr5P28930_001 Banana cytosol 62.77 66.25
GSMUA_Achr9P03690_001 Banana cytosol 65.14 63.85
Zm00001d010082_P001 Maize cytosol 61.59 60.77
Zm00001d042833_P001 Maize cytosol 61.42 60.7
Zm00001d012338_P001 Maize cytosol 60.74 60.23
Zm00001d038273_P001 Maize cytosol 60.07 59.27
VIT_13s0019g03380.t01 Wine grape cytosol 59.56 58.86
KRH73146 Soybean cytosol 56.35 57.02
KRH14993 Soybean cytosol 54.48 56.69
KRG97777 Soybean cytosol 56.18 56.27
GSMUA_Achr8P02350_001 Banana cytosol 16.24 55.81
KRH31107 Soybean cytosol 55.67 55.76
Solyc05g052620.2.1 Tomato cytosol 56.01 54.89
CDY24941 Canola cytosol 53.81 53.9
Bra000156.1-P Field mustard cytosol 53.64 53.73
AT2G39940.1 Thale cress cytosol 53.3 53.21
CDY20501 Canola cytosol 52.96 51.99
Bra005000.1-P Field mustard cytosol 52.79 51.74
CDX74819 Canola cytosol 52.45 51.67
CDX93223 Canola cytosol 50.42 50.42
CDX93225 Canola cytosol 49.75 49.49
CDY07041 Canola cytosol 49.58 49.49
CDY07040 Canola cytosol 50.08 48.76
Bra017045.1-P Field mustard cytosol 50.08 48.76
Bra017044.1-P Field mustard cytosol 49.58 48.51
CDY60996 Canola endoplasmic reticulum, golgi 53.47 44.95
Zm00001d003911_P003 Maize cytosol 29.27 30.09
Zm00001d048233_P001 Maize cytosol 30.12 29.77
Zm00001d007357_P005 Maize cytosol 28.26 29.14
Zm00001d025268_P001 Maize cytosol 28.09 28.97
Zm00001d027975_P001 Maize cytosol 29.27 28.93
Zm00001d010863_P001 Maize plastid 27.92 27.97
Zm00001d052188_P001 Maize plastid 30.8 27.33
Zm00001d018126_P001 Maize plastid 30.12 26.77
Protein Annotations
EnsemblPlants:Zm00001d047848_P001EnsemblPlants:Zm00001d047848_T001EnsemblPlantsGene:Zm00001d047848Gene3D:1.20.1280.50Gene3D:3.80.10.10InterPro:IPR032675
InterPro:LRR_dom_sfPANTHER:PTHR43944PANTHER:PTHR43944:SF2ProteinID:AQL07807.1SEG:segSUPFAM:SSF52047
UniParc:UPI0001CAB3F4UniProt:A0A1D6PE20MapMan:11.7.2.1.1:::
Description
Coronatine-insensitive protein 1
Coordinates
chr9:-:143212352..143215236
Molecular Weight (calculated)
66726.6 Da
IEP (calculated)
7.254
GRAVY (calculated)
-0.130
Length
591 amino acids
Sequence
(BLAST)
001: MGGEAEGGER RLGRVLSFGI PDTALGLVMG YVEDPWDRDA ISLVCRHWCR VDALSRKHVT VAMAYSTTPE RLFRRFPCLE SLKLKAKPRA SMFNLISDDW
101: GGSASPWIRQ LSATFHFLKK LHLRRMIVSN EDINILVRAK AHMLVALKLD RCSGFSTPSI ALVARSCRKL ETLFLEESTI DEKENDEWIR ELATSNSVLE
201: TLNFFLTDLR ASPEYLTLLV RNCQRLKTLK ISECFMPDLV SLFRTAQTLQ EFAGGSFEEQ GQPVASRNYE NYYFPPSLHH LSLLYMGTND MQILFPYATA
301: LKKLDLQFTF LSTEDHCQIV QRCSNLETLE VRDVIGDRGL QVVAQTCKKL HRLRVERGDD DQGGLEDEQG RISQVGLMAI AQGCPELTYW AIHVSDITNA
401: ALEAVGTCSK NLNDFRLVLL DREAHITELP LDNGVRALLR GCTKLRRFAF YVRPGALSDV GLGYVGEFSK SIRYMLLGNV GESDNGIIQL SKGCPSLQKL
501: EVRGCLFSEH ALALAALQLK SLRYLWVQGF RSSPTGTDIM AMVRPFWNIE YIVPDQDEPC PEHKRQILAY YSLAGRRTDC PPSVTLLYPA F
Best Arabidopsis Sequence Match ( AT1G12820.1 )
(BLAST)
001: MNYFPDEVIE HVFDFVASHK DRNSISLVCK SWHKIERFSR KEVFIGNCYA INPERLIRRF PCLKSLTLKG KPHFADFNLV PHEWGGFVHP WIEALARSRV
101: GLEELRLKRM VVTDESLDLL SRSFANFKSL VLVSCEGFTT DGLASIAANC RHLRELDLQE NEIDDHRGQW LNCFPDSCTT LMSLNFACLK GETNVAALER
201: LVARSPNLKS LKLNRAVPLD ALARLMSCAP QLVDLGVGSY ENEPDPESFA KLMTAIKKYT SLRSLSGFLE VAPLCLPAFY PICQNLISLN LSYAAEIQGN
301: HLIKLIQLCK RLQRLWILDS IGDKGLAVVA ATCKELQELR VFPSDVHGEE DNNASVTEVG LVAISAGCPK LHSILYFCKQ MTNAALIAVA KNCPNFIRFR
401: LCILEPHKPD HITFQSLDEG FGAIVQACKG LRRLSVSGLL TDQVFLYIGM YAEQLEMLSI AFAGDTDKGM LYVLNGCKKM RKLEIRDSPF GNAALLADVG
501: RYETMRSLWM SSCEVTLGGC KRLAQNSPRL NVEIINENEN NGMEQNEEDE REKVDKLYLY RTVVGTRKDA PPYVRIL
Arabidopsis Description
AFB3Protein AUXIN SIGNALING F-BOX 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LPW7]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.