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Maize
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Maize
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 3
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
Zm00001d003685_P001
Zm00001d005726_P001
Zm00001d005813_P002
Zm00001d006860_P001
Zm00001d010082_P001
Zm00001d012338_P001
Zm00001d020409_P002
Zm00001d020614_P001
Zm00001d022139_P001
Zm00001d024221_P001
Zm00001d025407_P001
Zm00001d028143_P002
Zm00001d028517_P001
Zm00001d028543_P001
Zm00001d029448_P001
Zm00001d032009_P001
Zm00001d035130_P001
Zm00001d038273_P001
Zm00001d042193_P001
Zm00001d042833_P001
Zm00001d047848_P001
Zm00001d049652_P001
Zm00001d050139_P001
Zm00001d050365_P006

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT2G39940.1 Zm00001d005813_P002 AT1G19180.1 17637677
AT2G39940.1 Zm00001d006860_P001 AT1G19180.1 17637677
AT2G39940.1 Zm00001d020614_P001 AT1G19180.1 17637677
AT2G39940.1 Zm00001d022139_P001 AT1G19180.1 17637677
AT2G39940.1 Zm00001d029448_P001 AT1G19180.1 17637677
AT2G39940.1 Zm00001d005813_P002 AT1G19180.1 18547396
AT2G39940.1 Zm00001d006860_P001 AT1G19180.1 18547396
AT2G39940.1 Zm00001d020614_P001 AT1G19180.1 18547396
AT2G39940.1 Zm00001d022139_P001 AT1G19180.1 18547396
AT2G39940.1 Zm00001d029448_P001 AT1G19180.1 18547396
AT2G39940.1 Zm00001d005813_P002 AT1G74950.1 18547396
AT2G39940.1 Zm00001d006860_P001 AT1G74950.1 18547396
AT2G39940.1 Zm00001d020614_P001 AT1G74950.1 18547396
AT2G39940.1 Zm00001d022139_P001 AT1G74950.1 18547396
AT2G39940.1 Zm00001d029448_P001 AT1G74950.1 18547396
AT2G39940.1 Zm00001d010082_P001 AT2G39940.1 12724535
AT2G39940.1 Zm00001d012338_P001 AT2G39940.1 12724535
AT2G39940.1 Zm00001d028543_P001 AT2G39940.1 12724535
AT2G39940.1 Zm00001d038273_P001 AT2G39940.1 12724535
AT2G39940.1 Zm00001d042833_P001 AT2G39940.1 12724535
AT2G39940.1 Zm00001d047848_P001 AT2G39940.1 12724535
AT2G39940.1 Zm00001d005726_P001 AT3G17860.1 17637675
AT2G39940.1 Zm00001d020409_P002 AT3G17860.1 17637675
AT2G39940.1 Zm00001d032009_P001 AT3G17860.1 17637675
AT2G39940.1 Zm00001d050365_P006 AT3G17860.1 17637675
AT2G39940.1 Zm00001d005726_P001 AT3G17860.1 18547396
AT2G39940.1 Zm00001d020409_P002 AT3G17860.1 18547396
AT2G39940.1 Zm00001d032009_P001 AT3G17860.1 18547396
AT2G39940.1 Zm00001d050365_P006 AT3G17860.1 18547396
AT2G39940.1 Zm00001d005726_P001 AT3G17860.1 19309455
AT2G39940.1 Zm00001d020409_P002 AT3G17860.1 19309455
AT2G39940.1 Zm00001d032009_P001 AT3G17860.1 19309455
AT2G39940.1 Zm00001d050365_P006 AT3G17860.1 19309455
AT2G39940.1 Zm00001d042193_P001 AT4G02570.1 12172031
AT2G39940.1 Zm00001d042193_P001 AT4G02570.1 12445118
AT2G39940.1 Zm00001d042193_P001 AT4G02570.1 12724535
AT2G39940.1 Zm00001d003685_P001 AT4G14110.1 12724535
AT2G39940.1 Zm00001d025407_P001 AT4G14110.1 12724535
AT2G39940.1 Zm00001d028517_P001 AT5G14250.1 12724535
AT2G39940.1 Zm00001d035130_P001 AT5G14250.1 12724535
AT2G39940.1 Zm00001d049652_P001 AT5G14250.1 12724535
AT2G39940.1 Zm00001d028143_P002 AT5G42970.1 12724535
AT2G39940.1 Zm00001d024221_P001 AT5G63110.1 12445118
AT2G39940.1 Zm00001d050139_P001 AT5G63110.1 12445118
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d042833_P001 Maize cytosol 94.13 93.81
EES01769 Sorghum cytosol 93.62 93.62
Os01t0853400-01 Rice cytosol 84.73 84.87
TraesCS3A01G367500.1 Wheat cytosol 79.19 84.74
TraesCS3D01G360400.2 Wheat cytosol 84.56 84.71
TraesCS3B01G399200.1 Wheat cytosol 84.23 84.51
HORVU3Hr1G085210.2 Barley cytosol 84.06 84.34
Zm00001d038273_P001 Maize cytosol 80.2 79.8
Zm00001d010082_P001 Maize cytosol 80.2 79.8
GSMUA_Achr6P33630_001 Banana cytosol, mitochondrion, nucleus 66.28 67.75
GSMUA_Achr5P28930_001 Banana cytosol 63.26 67.32
GSMUA_Achr9P03690_001 Banana cytosol 65.77 65.01
Zm00001d028543_P001 Maize cytosol 60.4 60.91
VIT_13s0019g03380.t01 Wine grape cytosol 61.07 60.87
Zm00001d047848_P001 Maize cytosol 60.23 60.74
KRG97777 Soybean cytosol 58.56 59.15
KRH31107 Soybean cytosol 58.56 59.15
KRH14993 Soybean cytosol 55.7 58.45
KRH73146 Soybean cytosol 57.21 58.39
GSMUA_Achr8P02350_001 Banana cytosol 16.44 56.98
CDY24941 Canola cytosol 56.04 56.61
Bra000156.1-P Field mustard cytosol 55.87 56.44
Solyc05g052620.2.1 Tomato cytosol 56.88 56.22
AT2G39940.1 Thale cress cytosol 55.7 56.08
CDX93223 Canola cytosol 54.36 54.82
CDX93225 Canola cytosol 54.53 54.71
CDY20501 Canola cytosol 55.2 54.65
CDY07041 Canola cytosol 54.19 54.56
Bra005000.1-P Field mustard cytosol 55.03 54.39
CDX74819 Canola cytosol 54.53 54.17
CDY07040 Canola cytosol 54.87 53.87
Bra017045.1-P Field mustard cytosol 54.53 53.54
Bra017044.1-P Field mustard cytosol 53.69 52.98
CDY60996 Canola endoplasmic reticulum, golgi 55.7 47.23
Zm00001d003911_P003 Maize cytosol 29.87 30.96
Zm00001d025268_P001 Maize cytosol 29.53 30.72
Zm00001d048233_P001 Maize cytosol 30.37 30.27
Zm00001d007357_P005 Maize cytosol 28.52 29.67
Zm00001d027975_P001 Maize cytosol 29.7 29.6
Zm00001d010863_P001 Maize plastid 28.86 29.15
Zm00001d018126_P001 Maize plastid 30.7 27.52
Zm00001d052188_P001 Maize plastid 30.7 27.48
Protein Annotations
EnsemblPlants:Zm00001d012338_P001EnsemblPlants:Zm00001d012338_T001EnsemblPlantsGene:Zm00001d012338Gene3D:1.20.1280.50Gene3D:3.80.10.10GO:GO:0003674
GO:GO:0005488GO:GO:0005515InterPro:F-box-like_dom_sfInterPro:IPR032675InterPro:LRR_dom_sfPANTHER:PTHR43944
PANTHER:PTHR43944:SF3ProteinID:AQK99359.1SEG:segSUPFAM:SSF52047SUPFAM:SSF81383UniParc:UPI0001CAAD3A
UniProt:A0A1D6G883MapMan:11.7.2.1.1::::
Description
Coronatine-insensitive protein 1
Coordinates
chr8:-:172708664..172712351
Molecular Weight (calculated)
66503.1 Da
IEP (calculated)
7.858
GRAVY (calculated)
-0.018
Length
596 amino acids
Sequence
(BLAST)
001: MGGEVPEPRR LSRSLSFGCG GVPEEALHLV LGYVDDPRDR EAASLVCRRW HRIDALSRKH VTVGFCYAVE PARLLARFRR LESLALKGRP RAAMYGLIPE
101: DFGAYAAPWV AELAAPLDCL KALHLRRMTV TDEDIAVLVR ARGHMLQVLK LDKCSGFSTD ALRLVARSCR SLRTLFLEEC IIADEGSEWL HELAVNNSVL
201: VTLNFYMTEL KVEPADLELL ARNCKSLISL KMSDCDLSDL IGFLQTSKAL QEFAGGAFFE VGEYTKYEKV KLPPRLCFLG GLTFMGKNEM PVIFPYSASL
301: KKLDLQYTFL TTEDHCQLIA KCPNLLVLEV RNVIGDRGLE VVADTCKKLR RLRIERGDDD PGQEEQGGVS QIGLTAVAVG CRELEYIAAY VSDITNGALE
401: SIGTFCKNMY DFRLVLLDKQ NKITDLPLDN GVRALLRSCT KLRRFALYLR PGGLSDAGLG YVGQYSGNIQ YMLLGNVGES DNGLIRFAMG CANLRKLELR
501: GCCFSERALA VAVLQMPSLR YVWVQGYRAS QTGRDLMLMA RPYWNIEFVP PRPESACRVM ADGQPCVDTH AQVLAYYSLA GRRPDCPRWL VTLHPA
Best Arabidopsis Sequence Match ( AT1G12820.1 )
(BLAST)
001: MNYFPDEVIE HVFDFVASHK DRNSISLVCK SWHKIERFSR KEVFIGNCYA INPERLIRRF PCLKSLTLKG KPHFADFNLV PHEWGGFVHP WIEALARSRV
101: GLEELRLKRM VVTDESLDLL SRSFANFKSL VLVSCEGFTT DGLASIAANC RHLRELDLQE NEIDDHRGQW LNCFPDSCTT LMSLNFACLK GETNVAALER
201: LVARSPNLKS LKLNRAVPLD ALARLMSCAP QLVDLGVGSY ENEPDPESFA KLMTAIKKYT SLRSLSGFLE VAPLCLPAFY PICQNLISLN LSYAAEIQGN
301: HLIKLIQLCK RLQRLWILDS IGDKGLAVVA ATCKELQELR VFPSDVHGEE DNNASVTEVG LVAISAGCPK LHSILYFCKQ MTNAALIAVA KNCPNFIRFR
401: LCILEPHKPD HITFQSLDEG FGAIVQACKG LRRLSVSGLL TDQVFLYIGM YAEQLEMLSI AFAGDTDKGM LYVLNGCKKM RKLEIRDSPF GNAALLADVG
501: RYETMRSLWM SSCEVTLGGC KRLAQNSPRL NVEIINENEN NGMEQNEEDE REKVDKLYLY RTVVGTRKDA PPYVRIL
Arabidopsis Description
AFB3Protein AUXIN SIGNALING F-BOX 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LPW7]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.