Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra005000.1-P | Field mustard | cytosol | 100.0 | 99.5 |
| CDY20501 | Canola | cytosol | 98.5 | 98.17 |
| CDY24941 | Canola | cytosol | 89.83 | 91.36 |
| AT2G39940.1 | Thale cress | cytosol | 88.67 | 89.86 |
| CDX93223 | Canola | cytosol | 81.33 | 82.57 |
| CDY07041 | Canola | cytosol | 80.17 | 81.25 |
| CDX93225 | Canola | cytosol | 79.83 | 80.64 |
| CDY07040 | Canola | cytosol | 78.83 | 77.92 |
| CDY60996 | Canola | endoplasmic reticulum, golgi | 90.17 | 76.96 |
| KRH14993 | Soybean | cytosol | 65.67 | 69.37 |
| KRH73146 | Soybean | cytosol | 67.33 | 69.18 |
| VIT_13s0019g03380.t01 | Wine grape | cytosol | 68.5 | 68.73 |
| KRH31107 | Soybean | cytosol | 67.5 | 68.64 |
| KRG97777 | Soybean | cytosol | 67.17 | 68.31 |
| Solyc05g052620.2.1 | Tomato | cytosol | 67.0 | 66.67 |
| GSMUA_Achr6P33630_001 | Banana | cytosol, mitochondrion, nucleus | 60.83 | 62.61 |
| GSMUA_Achr5P28930_001 | Banana | cytosol | 57.67 | 61.79 |
| GSMUA_Achr9P03690_001 | Banana | cytosol | 60.83 | 60.53 |
| HORVU4Hr1G060950.3 | Barley | cytosol | 54.33 | 55.63 |
| TraesCS4B01G213500.1 | Wheat | cytosol | 54.0 | 55.29 |
| Os05t0449500-01 | Rice | cytosol | 55.0 | 55.28 |
| GSMUA_Achr8P02350_001 | Banana | cytosol | 15.83 | 55.23 |
| TraesCS4A01G091200.1 | Wheat | cytosol | 53.83 | 55.12 |
| TraesCS4D01G214200.1 | Wheat | cytosol | 53.83 | 55.12 |
| EES18318 | Sorghum | cytosol | 55.0 | 55.09 |
| Zm00001d042833_P001 | Maize | cytosol | 54.83 | 55.02 |
| Os01t0853400-01 | Rice | cytosol | 54.5 | 54.96 |
| TraesCS3A01G367500.1 | Wheat | cytosol | 50.83 | 54.76 |
| Zm00001d038273_P001 | Maize | cytosol | 54.5 | 54.59 |
| Zm00001d012338_P001 | Maize | cytosol | 54.17 | 54.53 |
| HORVU1Hr1G073230.1 | Barley | cytosol | 53.67 | 54.48 |
| Zm00001d010082_P001 | Maize | cytosol | 54.33 | 54.42 |
| HORVU3Hr1G085210.2 | Barley | cytosol | 53.83 | 54.38 |
| TraesCS3B01G399200.1 | Wheat | cytosol | 53.83 | 54.38 |
| TraesCS3D01G360400.2 | Wheat | cytosol | 53.83 | 54.29 |
| TraesCS1B01G288100.1 | Wheat | cytosol | 53.33 | 54.05 |
| TraesCS1D01G278400.1 | Wheat | cytosol | 53.33 | 54.05 |
| Os03t0265500-01 | Rice | plasma membrane | 53.0 | 53.99 |
| TraesCS1A01G279100.1 | Wheat | cytosol | 53.17 | 53.89 |
| EES01769 | Sorghum | cytosol | 53.5 | 53.86 |
| EER95129 | Sorghum | cytosol | 52.5 | 53.3 |
| Zm00001d028543_P001 | Maize | cytosol | 52.0 | 52.79 |
| Zm00001d047848_P001 | Maize | cytosol | 51.67 | 52.45 |
| CDY68868 | Canola | cytosol | 30.0 | 33.33 |
| CDY53998 | Canola | cytosol | 31.0 | 31.85 |
| CDY34211 | Canola | cytosol | 30.33 | 31.65 |
| CDY26594 | Canola | cytosol | 30.33 | 31.49 |
| CDX71968 | Canola | cytosol | 30.33 | 31.49 |
| CDY28523 | Canola | cytosol | 30.17 | 31.48 |
| CDY16034 | Canola | cytosol | 30.33 | 31.43 |
| CDY11468 | Canola | cytosol | 30.83 | 31.09 |
| CDY21068 | Canola | cytosol | 30.5 | 31.02 |
| CDY31282 | Canola | cytosol | 30.33 | 31.01 |
| CDX76680 | Canola | cytosol | 30.67 | 30.92 |
| CDY53774 | Canola | cytosol | 29.83 | 30.55 |
| CDX90899 | Canola | cytosol | 29.17 | 29.86 |
| CDY21439 | Canola | cytosol | 29.83 | 29.64 |
| CDX83172 | Canola | cytosol, plastid | 29.83 | 29.49 |
| CDY34286 | Canola | cytosol | 29.83 | 29.39 |
| CDY03450 | Canola | cytosol | 29.67 | 29.18 |
| CDX67912 | Canola | endoplasmic reticulum, golgi | 31.17 | 28.99 |
| CDX89163 | Canola | cytosol | 29.17 | 27.96 |
| CDY21947 | Canola | plastid, vacuole | 28.83 | 27.64 |
| CDY22108 | Canola | endoplasmic reticulum, golgi, plastid, vacuole | 29.0 | 27.23 |
| CDX97301 | Canola | cytosol | 3.67 | 23.91 |
Protein Annotations
| EnsemblPlants:CDX74819 | EnsemblPlantsGene:GSBRNA2T00116794001 | Gene3D:1.20.1280.50 | Gene3D:3.80.10.10 | InterPro:IPR032675 | InterPro:LRR_dom_sf |
| PANTHER:PTHR43944 | PANTHER:PTHR43944:SF6 | ProteinID:CDX74819 | ProteinID:CDX74819.1 | SUPFAM:SSF52047 | UniParc:UPI0004EEA5FC |
| MapMan:11.7.2.1.1 | : | : | : | : | : |
Description
BnaA05g05650D
Coordinates
chrLK031802:+:803938..807322
Molecular Weight (calculated)
68574.6 Da
IEP (calculated)
7.529
GRAVY (calculated)
-0.240
Length
600 amino acids
Sequence
(BLAST)
(BLAST)
001: MEDPDIKKCR LTPKKMIIAT PPLSLSVDDV IEQVMPYITD SKDRDSASLV CRRWFKIDSE TREHVTMALC YTSTPDRLSR RFPNLRSLKL KGKPRAAMFN
101: LIPENWGGFV TPWVNEIAAS LRRLKSVHFR RMIVSDLDLD VLAKSRLDEL EALKLDKCSG FSTDGLLSIV KHCRRIKTLL MEESSFLEKD GQWLHELALH
201: NTSLEVLNFY MTEFNKISPK DLETIARNCR RSLISVKVGD LEILELVGFF KAATNLEEFC GGSLNEDIGR PEKYMNLTFP PKLCRLGLSY LGANEMPILF
301: PFAAQIRKLD LLYALLETED HCTLIQKCPN LETRNVIGDR GLEVLAQHCK KLKRLRIERG ADEQGMEDEE GLVSQRGLIA LAQGCQELEY MAVYVSDITN
401: ESLESIGTHL KNLCDFRLVL LDREERITDL PLDNGVRSLL IGCKKLRRFA FYLRQGGLTD VGLSYIGRYS PNVRWMLLGY VGETDEGLME FSRGCPSLQK
501: LEMRGCCFSE RAIAAAVMRL PSLRYLWVQG YRASTRGQDL RLMSRPYWNI ELIPSRRVPE VNQLGEVREM EHPAHILAYY SLAGERTDCP PTVKVLKEET
101: LIPENWGGFV TPWVNEIAAS LRRLKSVHFR RMIVSDLDLD VLAKSRLDEL EALKLDKCSG FSTDGLLSIV KHCRRIKTLL MEESSFLEKD GQWLHELALH
201: NTSLEVLNFY MTEFNKISPK DLETIARNCR RSLISVKVGD LEILELVGFF KAATNLEEFC GGSLNEDIGR PEKYMNLTFP PKLCRLGLSY LGANEMPILF
301: PFAAQIRKLD LLYALLETED HCTLIQKCPN LETRNVIGDR GLEVLAQHCK KLKRLRIERG ADEQGMEDEE GLVSQRGLIA LAQGCQELEY MAVYVSDITN
401: ESLESIGTHL KNLCDFRLVL LDREERITDL PLDNGVRSLL IGCKKLRRFA FYLRQGGLTD VGLSYIGRYS PNVRWMLLGY VGETDEGLME FSRGCPSLQK
501: LEMRGCCFSE RAIAAAVMRL PSLRYLWVQG YRASTRGQDL RLMSRPYWNI ELIPSRRVPE VNQLGEVREM EHPAHILAYY SLAGERTDCP PTVKVLKEET
001: MEDPDIKRCK LSCVATVDDV IEQVMTYITD PKDRDSASLV CRRWFKIDSE TREHVTMALC YTATPDRLSR RFPNLRSLKL KGKPRAAMFN LIPENWGGYV
101: TPWVTEISNN LRQLKSVHFR RMIVSDLDLD RLAKARADDL ETLKLDKCSG FTTDGLLSIV THCRKIKTLL MEESSFSEKD GKWLHELAQH NTSLEVLNFY
201: MTEFAKISPK DLETIARNCR SLVSVKVGDF EILELVGFFK AAANLEEFCG GSLNEDIGMP EKYMNLVFPR KLCRLGLSYM GPNEMPILFP FAAQIRKLDL
301: LYALLETEDH CTLIQKCPNL EVLETRNVIG DRGLEVLAQY CKQLKRLRIE RGADEQGMED EEGLVSQRGL IALAQGCQEL EYMAVYVSDI TNESLESIGT
401: YLKNLCDFRL VLLDREERIT DLPLDNGVRS LLIGCKKLRR FAFYLRQGGL TDLGLSYIGQ YSPNVRWMLL GYVGESDEGL MEFSRGCPNL QKLEMRGCCF
501: SERAIAAAVT KLPSLRYLWV QGYRASMTGQ DLMQMARPYW NIELIPSRRV PEVNQQGEIR EMEHPAHILA YYSLAGQRTD CPTTVRVLKE PI
101: TPWVTEISNN LRQLKSVHFR RMIVSDLDLD RLAKARADDL ETLKLDKCSG FTTDGLLSIV THCRKIKTLL MEESSFSEKD GKWLHELAQH NTSLEVLNFY
201: MTEFAKISPK DLETIARNCR SLVSVKVGDF EILELVGFFK AAANLEEFCG GSLNEDIGMP EKYMNLVFPR KLCRLGLSYM GPNEMPILFP FAAQIRKLDL
301: LYALLETEDH CTLIQKCPNL EVLETRNVIG DRGLEVLAQY CKQLKRLRIE RGADEQGMED EEGLVSQRGL IALAQGCQEL EYMAVYVSDI TNESLESIGT
401: YLKNLCDFRL VLLDREERIT DLPLDNGVRS LLIGCKKLRR FAFYLRQGGL TDLGLSYIGQ YSPNVRWMLL GYVGESDEGL MEFSRGCPNL QKLEMRGCCF
501: SERAIAAAVT KLPSLRYLWV QGYRASMTGQ DLMQMARPYW NIELIPSRRV PEVNQQGEIR EMEHPAHILA YYSLAGQRTD CPTTVRVLKE PI
Arabidopsis Description
COI1Coronatine-insensitive protein 1 [Source:UniProtKB/Swiss-Prot;Acc:O04197]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.