Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 2
- cytosol 2
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX90899 | Canola | cytosol | 61.96 | 9.73 |
| CDY53774 | Canola | cytosol | 60.87 | 9.56 |
| CDY68868 | Canola | cytosol | 54.35 | 9.26 |
| CDY21947 | Canola | plastid, vacuole | 61.96 | 9.11 |
| CDY22108 | Canola | endoplasmic reticulum, golgi, plastid, vacuole | 60.87 | 8.76 |
| CDX76680 | Canola | cytosol | 53.26 | 8.24 |
| CDY11468 | Canola | cytosol | 53.26 | 8.24 |
| CDY53998 | Canola | cytosol | 51.09 | 8.05 |
| CDX89163 | Canola | cytosol | 54.35 | 7.99 |
| CDX67912 | Canola | endoplasmic reticulum, golgi | 50.0 | 7.13 |
| CDY34211 | Canola | cytosol | 43.48 | 6.96 |
| CDY28523 | Canola | cytosol | 43.48 | 6.96 |
| CDX71968 | Canola | cytosol | 41.3 | 6.57 |
| CDY26594 | Canola | cytosol | 41.3 | 6.57 |
| CDY16034 | Canola | cytosol | 41.3 | 6.56 |
| CDY31282 | Canola | cytosol | 41.3 | 6.47 |
| CDY21068 | Canola | cytosol | 41.3 | 6.44 |
| CDY21439 | Canola | cytosol | 35.87 | 5.46 |
| CDX83172 | Canola | cytosol, plastid | 35.87 | 5.44 |
| CDY34286 | Canola | cytosol | 29.35 | 4.43 |
| CDY03450 | Canola | cytosol | 29.35 | 4.43 |
| CDX93223 | Canola | cytosol | 28.26 | 4.4 |
| CDX93225 | Canola | cytosol | 28.26 | 4.38 |
| CDY07040 | Canola | cytosol | 28.26 | 4.28 |
| CDY07041 | Canola | cytosol | 27.17 | 4.22 |
| CDY24941 | Canola | cytosol | 26.09 | 4.07 |
| CDY20501 | Canola | cytosol | 25.0 | 3.82 |
| CDX74819 | Canola | cytosol | 23.91 | 3.67 |
| CDY60996 | Canola | endoplasmic reticulum, golgi | 26.09 | 3.41 |
Protein Annotations
| EnsemblPlants:CDX97301 | EnsemblPlantsGene:GSBRNA2T00104353001 | Gene3D:3.80.10.10 | InterPro:IPR032675 | InterPro:LRR_dom_sf | PANTHER:PTHR43944 |
| PANTHER:PTHR43944:SF7 | ProteinID:CDX97301 | ProteinID:CDX97301.1 | UniParc:UPI0004EDF1C6 | MapMan:35.1 | : |
Description
BnaA02g20920D
Coordinates
chrLK031898:-:717180..717560
Molecular Weight (calculated)
10240.7 Da
IEP (calculated)
8.490
GRAVY (calculated)
0.282
Length
92 amino acids
Sequence
(BLAST)
(BLAST)
1: MLDLVELLSQ CSKLQKLWLY VSQVMDLIED KGLKVIASCC VRNCEKKKGT AKLRLALREQ GLVSVSESCP NLESVIYFSV QFTKAALVTT SV
001: MGLRFPPKVL EHILSFIDSN EDRNSVSLVC KSWFETERKT RKRVFVGNCY AVSPAAVTRR FPEMRSLTLK GKPHFADYNL VPDGWGGYAW PWIEAMAAKS
101: SSLEEIRMKR MVVTDECLEK IAASFKDFKV LVLTSCEGFS TDGIAAIAAT CRNLRVLELR ECIVEDLGGD WLSYFPESST SLVSLDFSCL DSEVKISDLE
201: RLVSRSPNLK SLKLNPAVTL DGLVSLLRCA PQLTELGTGS FAAQLKPEAF SKLSEAFSNC KQLQSLSGLW DVLPEYLPAL YSVCPGLTSL NLSYATVRMP
301: DLVELLRRCS KLQKLWVMDL IEDKGLEAVA SYCKELRELR VFPSEPDLDA TNIPLTEQGL VFVSKGCRKL ESVLYFCVQF TNAALFTIAR KRPNLKCFRL
401: CVIEPFAPDY KTNEPLDKGF KAIAEGCRDL RRLSVSGLLS DKAFKYIGKH AKKVRMLSIA FAGDSDLMLH HLLSGCESLK KLEIRDCPFG DTALLEHAAK
501: LETMRSLWMS SCFVSFGACK LLSQKMPRLN VEVIDEHPPE SRPESSPVER IYIYRTVAGP RMDTPEFVWT IHKNPENGVS HLAIK
101: SSLEEIRMKR MVVTDECLEK IAASFKDFKV LVLTSCEGFS TDGIAAIAAT CRNLRVLELR ECIVEDLGGD WLSYFPESST SLVSLDFSCL DSEVKISDLE
201: RLVSRSPNLK SLKLNPAVTL DGLVSLLRCA PQLTELGTGS FAAQLKPEAF SKLSEAFSNC KQLQSLSGLW DVLPEYLPAL YSVCPGLTSL NLSYATVRMP
301: DLVELLRRCS KLQKLWVMDL IEDKGLEAVA SYCKELRELR VFPSEPDLDA TNIPLTEQGL VFVSKGCRKL ESVLYFCVQF TNAALFTIAR KRPNLKCFRL
401: CVIEPFAPDY KTNEPLDKGF KAIAEGCRDL RRLSVSGLLS DKAFKYIGKH AKKVRMLSIA FAGDSDLMLH HLLSGCESLK KLEIRDCPFG DTALLEHAAK
501: LETMRSLWMS SCFVSFGACK LLSQKMPRLN VEVIDEHPPE SRPESSPVER IYIYRTVAGP RMDTPEFVWT IHKNPENGVS HLAIK
Arabidopsis Description
GRH1GRR1-like protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZR12]
SUBAcon: [plastid,cytosol]
SUBAcon: [plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.