Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G24390.1 | CDX73678 | AT3G51920.1 | 17360592 |
| AT4G24390.1 | CDX95314 | AT3G51920.1 | 17360592 |
| AT4G24390.1 | CDY23174 | AT3G51920.1 | 17360592 |
| AT4G24390.1 | CDY06478 | AT4G14640.1 | 17360592 |
| AT4G24390.1 | CDX92401 | AT5G21274.1 | 17360592 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra013798.1-P | Field mustard | cytosol | 98.85 | 99.18 |
| CDY03450 | Canola | cytosol | 96.39 | 96.23 |
| AT4G24390.1 | Thale cress | cytosol, plastid | 83.42 | 81.54 |
| CDX83172 | Canola | cytosol, plastid | 77.34 | 77.59 |
| CDY21439 | Canola | cytosol | 76.52 | 77.15 |
| VIT_18s0001g07120.t01 | Wine grape | cytosol | 69.46 | 71.21 |
| KRH52925 | Soybean | cytosol | 62.73 | 65.08 |
| KRH62206 | Soybean | cytosol | 62.07 | 64.84 |
| KRH72427 | Soybean | cytosol | 66.5 | 64.29 |
| PGSC0003DMT400005419 | Potato | cytosol | 64.7 | 64.27 |
| Solyc04g074980.2.1 | Tomato | cytosol | 65.52 | 64.04 |
| KRH16819 | Soybean | cytosol | 66.5 | 63.28 |
| HORVU4Hr1G080360.1 | Barley | cytosol, peroxisome, plastid | 35.3 | 62.68 |
| GSMUA_Achr3P06710_001 | Banana | cytosol | 58.62 | 62.3 |
| Os03t0187500-01 | Rice | cytosol | 25.45 | 61.51 |
| HORVU4Hr1G015730.1 | Barley | cytosol, peroxisome, plastid | 33.66 | 61.38 |
| GSMUA_Achr7P11780_001 | Banana | cytosol | 57.96 | 59.83 |
| GSMUA_Achr5P05520_001 | Banana | cytosol | 57.64 | 59.8 |
| Os02t0759700-01 | Rice | cytosol | 61.25 | 58.56 |
| HORVU6Hr1G077570.1 | Barley | mitochondrion | 59.44 | 57.64 |
| TraesCS7B01G081200.1 | Wheat | cytosol | 58.62 | 57.12 |
| TraesCS7A01G176200.1 | Wheat | cytosol | 58.46 | 57.05 |
| TraesCS7D01G177500.1 | Wheat | cytosol, plastid | 58.78 | 56.92 |
| TraesCS6B01G345800.1 | Wheat | plastid | 60.26 | 56.9 |
| TraesCS6A01G315300.1 | Wheat | plastid | 60.43 | 56.88 |
| TraesCS6D01G294600.1 | Wheat | plastid | 60.43 | 56.79 |
| EES05842 | Sorghum | plastid | 60.92 | 56.04 |
| Zm00001d018126_P001 | Maize | plastid | 60.76 | 55.64 |
| Zm00001d052188_P001 | Maize | plastid | 60.76 | 55.56 |
| TraesCS4D01G301800.1 | Wheat | cytosol, nucleus, peroxisome | 54.68 | 54.59 |
| TraesCS4A01G001800.1 | Wheat | cytosol | 54.35 | 54.44 |
| Zm00001d027975_P001 | Maize | cytosol | 52.38 | 53.34 |
| EER92735 | Sorghum | cytosol | 52.05 | 52.66 |
| Zm00001d048233_P001 | Maize | cytosol | 51.56 | 52.51 |
| CDY28523 | Canola | cytosol | 47.29 | 50.09 |
| CDY34211 | Canola | cytosol | 46.96 | 49.74 |
| CDY26594 | Canola | cytosol | 46.14 | 48.62 |
| HORVU4Hr1G078120.4 | Barley | cytosol, plastid | 54.35 | 48.53 |
| CDY16034 | Canola | cytosol | 46.14 | 48.53 |
| CDX71968 | Canola | cytosol | 45.98 | 48.44 |
| CDY68868 | Canola | cytosol | 42.36 | 47.78 |
| CDY31282 | Canola | cytosol | 45.98 | 47.7 |
| CDY21068 | Canola | cytosol | 45.81 | 47.29 |
| CDY53998 | Canola | cytosol | 45.16 | 47.09 |
| CDY53774 | Canola | cytosol | 44.5 | 46.25 |
| CDX76680 | Canola | cytosol | 45.16 | 46.22 |
| CDY11468 | Canola | cytosol | 44.83 | 45.88 |
| CDX90899 | Canola | cytosol | 44.01 | 45.73 |
| CDX67912 | Canola | endoplasmic reticulum, golgi | 45.48 | 42.95 |
| CDY21947 | Canola | plastid, vacuole | 43.35 | 42.17 |
| CDY22108 | Canola | endoplasmic reticulum, golgi, plastid, vacuole | 43.84 | 41.78 |
| CDX89163 | Canola | cytosol | 40.89 | 39.78 |
| CDY24941 | Canola | cytosol | 29.56 | 30.51 |
| CDY20501 | Canola | cytosol | 29.72 | 30.07 |
| CDX74819 | Canola | cytosol | 29.39 | 29.83 |
| CDX97301 | Canola | cytosol | 4.43 | 29.35 |
| CDY07041 | Canola | cytosol | 28.41 | 29.22 |
| CDX93223 | Canola | cytosol | 27.91 | 28.76 |
| CDX93225 | Canola | cytosol | 27.59 | 28.28 |
| CDY07040 | Canola | cytosol | 27.42 | 27.51 |
| CDY60996 | Canola | endoplasmic reticulum, golgi | 29.39 | 25.46 |
Protein Annotations
| EnsemblPlants:CDY34286 | EnsemblPlantsGene:GSBRNA2T00056317001 | Gene3D:1.20.1280.50 | Gene3D:3.80.10.10 | InterPro:IPR032675 | InterPro:LRR_dom_sf |
| InterPro:Leu-rich_rpt_Cys-con_subtyp | PANTHER:PTHR43944 | PANTHER:PTHR43944:SF8 | ProteinID:CDY34286 | ProteinID:CDY34286.1 | SEG:seg |
| SMART:SM00367 | SUPFAM:SSF52047 | UniParc:UPI0004EE5AE4 | UniProt:A0A078H940 | MapMan:11.2.2.1.1 | MapMan:19.2.2.8.1.4.6 |
Description
BnaA01g13890DBnaA01g13890D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H940]
Coordinates
chrLK032332:-:130942..133590
Molecular Weight (calculated)
68031.3 Da
IEP (calculated)
5.099
GRAVY (calculated)
-0.155
Length
609 amino acids
Sequence
(BLAST)
(BLAST)
001: MAEEEDLSEM ANDVERHLKL DPPKSSSSSP PCPSHVLENV LENVLKFLTT RRDRNAVSLV SRSWHHVEAQ TRFEVFIGNC YSLSPARLTR RFTRVRSLFL
101: KGKPRFADFN LMPPDWGAQF APWVAATARA YPWLEKVSLK RMFVSDDDLA LLAVSFPGFK ELVLLCCEGF GTSGVAVVAN KCRQLKVLDL IESEVTDDEV
201: DWISCFPEGE THLESLSFDC VESPINFKAL EGLVVRSPCL RKLRTNRFVS LEELHTLMVR APQLTSLGTG SFSSSTHDGA QGEQEPDYAS AFRACRSLVC
301: LSGFRELTAE YLPAISPVCA NLTSLNFSYA NISPDVFKPI IRNCHNIRVF WALDSICDEG LQALAETCKE LRELRIFPFD PSEDSEGPVS GLGLQAISEG
401: CKKLESILYF CQRMTNVAVT AMSENCPQLT VFRLCIMGRH RPDHVTGKPM DDGFGAIVKN CKKLTRLAVS GLLTDQAFSL IGEYGKLIRT LSVAFAGDSD
501: MGLRYILEGC PKLEKLEIRD SPFGDVGLRS GMHRYNDMRF VWMSSCRLSR GACRDIAHTL PSVVVEAFGS DDDDDDDDED DNADYVETLY MYRSLDGPRK
601: DAPKFVTIL
101: KGKPRFADFN LMPPDWGAQF APWVAATARA YPWLEKVSLK RMFVSDDDLA LLAVSFPGFK ELVLLCCEGF GTSGVAVVAN KCRQLKVLDL IESEVTDDEV
201: DWISCFPEGE THLESLSFDC VESPINFKAL EGLVVRSPCL RKLRTNRFVS LEELHTLMVR APQLTSLGTG SFSSSTHDGA QGEQEPDYAS AFRACRSLVC
301: LSGFRELTAE YLPAISPVCA NLTSLNFSYA NISPDVFKPI IRNCHNIRVF WALDSICDEG LQALAETCKE LRELRIFPFD PSEDSEGPVS GLGLQAISEG
401: CKKLESILYF CQRMTNVAVT AMSENCPQLT VFRLCIMGRH RPDHVTGKPM DDGFGAIVKN CKKLTRLAVS GLLTDQAFSL IGEYGKLIRT LSVAFAGDSD
501: MGLRYILEGC PKLEKLEIRD SPFGDVGLRS GMHRYNDMRF VWMSSCRLSR GACRDIAHTL PSVVVEAFGS DDDDDDDDED DNADYVETLY MYRSLDGPRK
601: DAPKFVTIL
001: MTEEDSSAKM SEDVEKYLNL NPPCSSSSSS SSAATFTNKS RNFKSSPPPC PDHVLENVLE NVLQFLTSRC DRNAVSLVCR SWYRVEAQTR LEVFIGNCYS
101: LSPARLIHRF KRVRSLVLKG KPRFADFNLM PPNWGAQFSP WVAATAKAYP WLEKVHLKRM FVTDDDLALL AESFPGFKEL TLVCCEGFGT SGIAIVANKC
201: RQLKVLDLME SEVTDDELDW ISCFPEGETH LESLSFDCVE SPINFKALEE LVVRSPFLKK LRTNRFVSLE ELHRLMVRAP QLTSLGTGSF SPDNVPQGEQ
301: QPDYAAAFRA CKSIVCLSGF REFRPEYLLA ISSVCANLTS LNFSYANISP HMLKPIISNC HNIRVFWALD SIRDEGLQAV AATCKELREL RIFPFDPRED
401: SEGPVSGVGL QAISEGCRKL ESILYFCQNM TNGAVTAMSE NCPQLTVFRL CIMGRHRPDH VTGKPMDDGF GAIVKNCKKL TRLAVSGLLT DEAFSYIGEY
501: GKLIRTLSVA FAGNSDKALR YVLEGCPKLQ KLEIRDSPFG DVGLRSGMHR YSNMRFVWLS SCLISRGGCR GVSHALPNVV VEVFGADGDD DEDTVTGDYV
601: ETLYLYRSLD GPRKDAPKFV TIL
101: LSPARLIHRF KRVRSLVLKG KPRFADFNLM PPNWGAQFSP WVAATAKAYP WLEKVHLKRM FVTDDDLALL AESFPGFKEL TLVCCEGFGT SGIAIVANKC
201: RQLKVLDLME SEVTDDELDW ISCFPEGETH LESLSFDCVE SPINFKALEE LVVRSPFLKK LRTNRFVSLE ELHRLMVRAP QLTSLGTGSF SPDNVPQGEQ
301: QPDYAAAFRA CKSIVCLSGF REFRPEYLLA ISSVCANLTS LNFSYANISP HMLKPIISNC HNIRVFWALD SIRDEGLQAV AATCKELREL RIFPFDPRED
401: SEGPVSGVGL QAISEGCRKL ESILYFCQNM TNGAVTAMSE NCPQLTVFRL CIMGRHRPDH VTGKPMDDGF GAIVKNCKKL TRLAVSGLLT DEAFSYIGEY
501: GKLIRTLSVA FAGNSDKALR YVLEGCPKLQ KLEIRDSPFG DVGLRSGMHR YSNMRFVWLS SCLISRGGCR GVSHALPNVV VEVFGADGDD DEDTVTGDYV
601: ETLYLYRSLD GPRKDAPKFV TIL
Arabidopsis Description
FBX14F-box protein FBX14 [Source:UniProtKB/Swiss-Prot;Acc:Q8RWQ8]
SUBAcon: [plastid,cytosol]
SUBAcon: [plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.