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Soybean
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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 3
  • cytosol 2
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
Plant-mPloc:nucleus
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
KRG89812
KRG94975
KRH18664
KRH31638
KRH69070

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT4G24390.1 KRG89812 AT2G41090.1 17360592
AT4G24390.1 KRG94975 AT2G41090.1 17360592
AT4G24390.1 KRH18664 AT2G41090.1 17360592
AT4G24390.1 KRG89812 AT2G41100.1 17360592
AT4G24390.1 KRG94975 AT2G41100.1 17360592
AT4G24390.1 KRH18664 AT2G41100.1 17360592
AT4G24390.1 KRH31638 AT4G14640.1 17360592
AT4G24390.1 KRH69070 AT4G14640.1 17360592
AT4G24390.1 KRG89812 AT5G21274.1 17360592
AT4G24390.1 KRG94975 AT5G21274.1 17360592
AT4G24390.1 KRH18664 AT5G21274.1 17360592
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH62206 Soybean cytosol 93.19 93.83
VIT_18s0001g07120.t01 Wine grape cytosol 74.11 73.23
KRH72427 Soybean cytosol 78.53 73.17
KRH16819 Soybean cytosol 78.53 72.03
Os03t0187500-01 Rice cytosol 28.11 65.48
Solyc04g074980.2.1 Tomato cytosol 68.65 64.69
PGSC0003DMT400005419 Potato cytosol 67.29 64.44
HORVU4Hr1G080360.1 Barley cytosol, peroxisome, plastid 36.97 63.27
HORVU4Hr1G015730.1 Barley cytosol, peroxisome, plastid 35.78 62.87
CDY03450 Canola cytosol 65.25 62.79
Bra013798.1-P Field mustard cytosol 64.91 62.77
CDY34286 Canola cytosol 65.08 62.73
AT5G49980.1 Thale cress nucleus 66.1 62.68
CDY21439 Canola cytosol 64.4 62.58
Bra000604.1-P Field mustard cytosol, plastid 64.22 62.11
CDX83172 Canola cytosol, plastid 64.22 62.11
GSMUA_Achr3P06710_001 Banana cytosol 60.14 61.61
AT4G24390.1 Thale cress cytosol, plastid 64.91 61.16
GSMUA_Achr5P05520_001 Banana cytosol 60.65 60.65
TraesCS7B01G081200.1 Wheat cytosol 62.52 58.72
TraesCS7D01G177500.1 Wheat cytosol, plastid 62.86 58.66
TraesCS7A01G176200.1 Wheat cytosol 62.35 58.65
GSMUA_Achr7P11780_001 Banana cytosol 58.77 58.47
HORVU6Hr1G077570.1 Barley mitochondrion 62.18 58.12
Os02t0759700-01 Rice cytosol 62.35 57.46
TraesCS6B01G345800.1 Wheat plastid 62.35 56.74
TraesCS6A01G315300.1 Wheat plastid 62.52 56.72
TraesCS6D01G294600.1 Wheat plastid 62.18 56.33
EES05842 Sorghum plastid 63.03 55.89
Zm00001d052188_P001 Maize plastid 63.37 55.86
Zm00001d018126_P001 Maize plastid 62.69 55.34
EER92735 Sorghum cytosol 56.73 55.32
TraesCS4A01G001800.1 Wheat cytosol 56.9 54.93
TraesCS4D01G301800.1 Wheat cytosol, nucleus, peroxisome 57.07 54.92
Zm00001d027975_P001 Maize cytosol 55.88 54.85
Zm00001d048233_P001 Maize cytosol 54.68 53.68
KRH31921 Soybean cytosol 49.74 49.91
KRG94665 Soybean cytosol 48.38 49.65
KRH70053 Soybean cytosol 48.38 49.56
KRH71533 Soybean cytosol 49.23 49.4
KRH06858 Soybean cytosol 48.04 49.3
KRH68108 Soybean cytosol 49.06 49.15
KRG96377 Soybean cytosol 48.89 48.89
KRH49941 Soybean cytosol 48.04 48.79
HORVU4Hr1G078120.4 Barley cytosol, plastid 56.56 48.68
KRH41935 Soybean cytosol 47.7 48.36
KRH08397 Soybean cytosol 46.68 47.82
KRH14993 Soybean cytosol 29.81 30.81
KRH73146 Soybean cytosol 30.49 30.65
KRH31107 Soybean cytosol 29.81 29.66
KRG97777 Soybean cytosol 29.64 29.49
Protein Annotations
Gene3D:1.20.1280.50EntrezGene:100776213MapMan:11.2.2.1.1MapMan:19.2.2.8.1.4.6Gene3D:3.80.10.10EMBL:ACUP02003444
InterPro:F-box-like_dom_sfEnsemblPlantsGene:GLYMA_06G095400GO:GO:0003674GO:GO:0005488GO:GO:0005515UniProt:I1K9P6
InterPro:IPR032675EnsemblPlants:KRH52925ProteinID:KRH52925ProteinID:KRH52925.1InterPro:LRR_dom_sfInterPro:Leu-rich_rpt_Cys-con_subtyp
PANTHER:PTHR43944PANTHER:PTHR43944:SF8SMART:SM00367SUPFAM:SSF52047SUPFAM:SSF81383UniParc:UPI000233AA40
SEG:seg:::::
Description
hypothetical protein
Coordinates
chr6:+:7530783..7533737
Molecular Weight (calculated)
65987.6 Da
IEP (calculated)
6.004
GRAVY (calculated)
-0.010
Length
587 amino acids
Sequence
(BLAST)
001: MKQIDDGDDE QRSLSPLPEQ VLENVLESVL HFLTSRRDRN AASLVCKSWY RAEALTRPDL FIGNCYAVSP RRATARFPRV RSLTIKGKPR FADFDLMPLN
101: WGAHFTPWAT ALSQSYPSSL NKLHLKRMSL TDHDLILLSH SFPSFQDLVL TCCEGFGTTG LAALTSNCRL LRVLELVECV VEVGDEEMDW ISCFPESDAQ
201: THLESLVFDC VECPVNFDAL ERLVARSPLL RKLRLNRYVS MSQLHRLMHR APQLTHLGTG SFSASELDQE LDFASAFASC KSLVCLSGFR EFWADYLPAI
301: YPACANLISL NFSFADISAD QLKSVIRHCH KLQTFWVLDT ICDEGLQAVA ETCKDLRELR VFPVNTREEI EGPVSEVGFE AISRGCRKLQ SILFFCQRMT
401: NAAVVAMSNN CPDLVVFRLC IIGQYRPDPV TLEPMDEGFG AIVMNCKKLT RLAVSGLLTD RAFSYIGTYG KLIRTLSVAF AGDTDLGLQY VLQGCPNLQK
501: LEIRDSPFGD GALHSGLHHF YNMRFLWMSS CKLTRQACQE VAQTLPHLVL EVINSEEDKA DGIEILYMYR SLDGPRDDAP KVVTILC
Best Arabidopsis Sequence Match ( AT5G49980.1 )
(BLAST)
001: MTQDRSEMSE DDDDQQSPPL DLPSTAIADP CSSSSSPNKS RNCISNSQTF PDHVLENVLE NVLQFLDSRC DRNAASLVCK SWWRVEALTR SEVFIGNCYA
101: LSPARLTQRF KRVRSLVLKG KPRFADFNLM PPDWGANFAP WVSTMAQAYP CLEKVDLKRM FVTDDDLALL ADSFPGFKEL ILVCCEGFGT SGISIVANKC
201: RKLKVLDLIE SEVTDDEVDW ISCFPEDVTC LESLAFDCVE APINFKALEG LVARSPFLKK LRLNRFVSLV ELHRLLLGAP QLTSLGTGSF SHDEEPQSEQ
301: EPDYAAAFRA CKSVVCLSGF RELMPEYLPA IFPVCANLTS LNFSYANISP DMFKPIILNC HKLQVFWALD SICDEGLQAV AATCKELREL RIFPFDPRED
401: SEGPVSELGL QAISEGCRKL ESILYFCQRM TNAAVIAMSE NCPELTVFRL CIMGRHRPDH VTGKPMDEGF GAIVKNCKKL TRLAVSGLLT DQAFRYMGEY
501: GKLVRTLSVA FAGDSDMALR HVLEGCPRLQ KLEIRDSPFG DVALRSGMHR YYNMRFVWMS ACSLSKGCCK DIARAMPNLV VEVIGSDDDD DNRDYVETLY
601: MYRSLDGPRN DAPKFVTIL
Arabidopsis Description
AFB5AFB5 [Source:UniProtKB/TrEMBL;Acc:A0A178UB83]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.