Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH49941 | Soybean | cytosol | 96.89 | 97.06 |
| VIT_00s0181g00040.t01 | Wine grape | nucleus | 79.79 | 79.25 |
| Solyc02g079190.2.1 | Tomato | cytosol | 72.71 | 71.72 |
| PGSC0003DMT400057711 | Potato | cytosol | 72.37 | 71.14 |
| VIT_05s0020g00220.t01 | Wine grape | cytosol | 27.98 | 68.07 |
| VIT_05s0020g04830.t01 | Wine grape | cytosol | 26.94 | 65.55 |
| KRH06858 | Soybean | cytosol | 51.99 | 52.62 |
| KRG94665 | Soybean | cytosol | 51.81 | 52.45 |
| KRH68108 | Soybean | cytosol | 52.85 | 52.22 |
| KRG96377 | Soybean | cytosol | 52.68 | 51.96 |
| KRH70053 | Soybean | cytosol | 50.78 | 51.31 |
| KRH71533 | Soybean | cytosol | 51.47 | 50.94 |
| KRH31921 | Soybean | cytosol | 51.3 | 50.77 |
| KRH08397 | Soybean | cytosol | 48.19 | 48.69 |
| KRH52925 | Soybean | cytosol | 48.36 | 47.7 |
| KRH62206 | Soybean | cytosol | 48.01 | 47.68 |
| KRH72427 | Soybean | cytosol | 49.05 | 45.08 |
| KRH16819 | Soybean | cytosol | 48.88 | 44.22 |
| KRH31107 | Soybean | cytosol | 31.43 | 30.85 |
| KRG97777 | Soybean | cytosol | 31.26 | 30.68 |
| KRH14993 | Soybean | cytosol | 29.88 | 30.46 |
| KRH73146 | Soybean | cytosol | 30.57 | 30.31 |
Protein Annotations
| Gene3D:1.20.1280.50 | EntrezGene:100808522 | MapMan:11.2.2.1.1 | MapMan:19.2.2.8.1.4.6 | Gene3D:3.80.10.10 | EMBL:ACUP02004781 |
| EnsemblPlantsGene:GLYMA_08G059500 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | UniProt:I1KQQ6 | InterPro:IPR001611 |
| InterPro:IPR032675 | EnsemblPlants:KRH41935 | ProteinID:KRH41935 | ProteinID:KRH41935.1 | ProteinID:KRH41936.1 | InterPro:LRR_dom_sf |
| InterPro:Leu-rich_rpt | InterPro:Leu-rich_rpt_Cys-con_subtyp | PFAM:PF13516 | PANTHER:PTHR43944 | PANTHER:PTHR43944:SF1 | SMART:SM00367 |
| SUPFAM:SSF52047 | SUPFAM:SSF52058 | UniParc:UPI000294D04E | : | : | : |
Description
hypothetical protein
Coordinates
chr8:+:4549695..4555442
Molecular Weight (calculated)
65182.5 Da
IEP (calculated)
7.160
GRAVY (calculated)
-0.146
Length
579 amino acids
Sequence
(BLAST)
(BLAST)
001: MMECRRKKEN QNPNSTFPDE VLERISGMLK SRKDKSTVSL VCKEWYNAER WSRRSVFIGN CYSVSPEILT RRFPNIRSVT LKGKPRFSDF NLVPANWGAD
101: IHSWLVVFAG KYPWLEELRL KRMTVTDESL EFLALQFPNF KALSLLSCDG FSTDGLASIA TNCKNLTELD IQENGIEDKS GNWLGCFPDS FTSLEVLNFA
201: NLHNDVNFDA LEKLVCRCKS LKTLKVNKSV TLEQLQRLLV HVPQLGELGT GSFSQELTAQ QCSDLESAFK NCRNLHTLSG LWVATAQYLP VLYSACTNLT
301: FLNFSYAPLD SDGLAKLLVH CPKLQRIWVV DTVEDKGLEA VGSHCPLLEE LRVFPADPFD EGIVHGVTES GFIAVSQGCP RLHYVLYFCR QMTNAAVATV
401: VQNCPDFTHF RLCIMHPGQP DYLTQESMDE AFGAVVKTCT KLQRLAVSGY LTDLTFEYIG KYAKNLETLS VAFAGSSDWG MRCVLDGCPK LRKLEVRDCP
501: FGNGALLSGL GKYESMRSLW MSDCNLTMNG VRLLAKEMPR LNVEVIKEET YETHQAKKVY VYRSVAGPRR DAPPFVLTL
101: IHSWLVVFAG KYPWLEELRL KRMTVTDESL EFLALQFPNF KALSLLSCDG FSTDGLASIA TNCKNLTELD IQENGIEDKS GNWLGCFPDS FTSLEVLNFA
201: NLHNDVNFDA LEKLVCRCKS LKTLKVNKSV TLEQLQRLLV HVPQLGELGT GSFSQELTAQ QCSDLESAFK NCRNLHTLSG LWVATAQYLP VLYSACTNLT
301: FLNFSYAPLD SDGLAKLLVH CPKLQRIWVV DTVEDKGLEA VGSHCPLLEE LRVFPADPFD EGIVHGVTES GFIAVSQGCP RLHYVLYFCR QMTNAAVATV
401: VQNCPDFTHF RLCIMHPGQP DYLTQESMDE AFGAVVKTCT KLQRLAVSGY LTDLTFEYIG KYAKNLETLS VAFAGSSDWG MRCVLDGCPK LRKLEVRDCP
501: FGNGALLSGL GKYESMRSLW MSDCNLTMNG VRLLAKEMPR LNVEVIKEET YETHQAKKVY VYRSVAGPRR DAPPFVLTL
001: MNYFPDEVIE HVFDFVASHK DRNSISLVCK SWHKIERFSR KEVFIGNCYA INPERLIRRF PCLKSLTLKG KPHFADFNLV PHEWGGFVHP WIEALARSRV
101: GLEELRLKRM VVTDESLDLL SRSFANFKSL VLVSCEGFTT DGLASIAANC RHLRELDLQE NEIDDHRGQW LNCFPDSCTT LMSLNFACLK GETNVAALER
201: LVARSPNLKS LKLNRAVPLD ALARLMSCAP QLVDLGVGSY ENEPDPESFA KLMTAIKKYT SLRSLSGFLE VAPLCLPAFY PICQNLISLN LSYAAEIQGN
301: HLIKLIQLCK RLQRLWILDS IGDKGLAVVA ATCKELQELR VFPSDVHGEE DNNASVTEVG LVAISAGCPK LHSILYFCKQ MTNAALIAVA KNCPNFIRFR
401: LCILEPHKPD HITFQSLDEG FGAIVQACKG LRRLSVSGLL TDQVFLYIGM YAEQLEMLSI AFAGDTDKGM LYVLNGCKKM RKLEIRDSPF GNAALLADVG
501: RYETMRSLWM SSCEVTLGGC KRLAQNSPRL NVEIINENEN NGMEQNEEDE REKVDKLYLY RTVVGTRKDA PPYVRIL
101: GLEELRLKRM VVTDESLDLL SRSFANFKSL VLVSCEGFTT DGLASIAANC RHLRELDLQE NEIDDHRGQW LNCFPDSCTT LMSLNFACLK GETNVAALER
201: LVARSPNLKS LKLNRAVPLD ALARLMSCAP QLVDLGVGSY ENEPDPESFA KLMTAIKKYT SLRSLSGFLE VAPLCLPAFY PICQNLISLN LSYAAEIQGN
301: HLIKLIQLCK RLQRLWILDS IGDKGLAVVA ATCKELQELR VFPSDVHGEE DNNASVTEVG LVAISAGCPK LHSILYFCKQ MTNAALIAVA KNCPNFIRFR
401: LCILEPHKPD HITFQSLDEG FGAIVQACKG LRRLSVSGLL TDQVFLYIGM YAEQLEMLSI AFAGDTDKGM LYVLNGCKKM RKLEIRDSPF GNAALLADVG
501: RYETMRSLWM SSCEVTLGGC KRLAQNSPRL NVEIINENEN NGMEQNEEDE REKVDKLYLY RTVVGTRKDA PPYVRIL
Arabidopsis Description
AFB3Protein AUXIN SIGNALING F-BOX 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LPW7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.