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Soybean
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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 3
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
Plant-mPloc:nucleus
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
KRG89812
KRG94975
KRH18664
KRH31638
KRH69070

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT4G24390.1 KRG89812 AT2G41090.1 17360592
AT4G24390.1 KRG94975 AT2G41090.1 17360592
AT4G24390.1 KRH18664 AT2G41090.1 17360592
AT4G24390.1 KRG89812 AT2G41100.1 17360592
AT4G24390.1 KRG94975 AT2G41100.1 17360592
AT4G24390.1 KRH18664 AT2G41100.1 17360592
AT4G24390.1 KRH31638 AT4G14640.1 17360592
AT4G24390.1 KRH69070 AT4G14640.1 17360592
AT4G24390.1 KRG89812 AT5G21274.1 17360592
AT4G24390.1 KRG94975 AT5G21274.1 17360592
AT4G24390.1 KRH18664 AT5G21274.1 17360592
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH52925 Soybean cytosol 93.83 93.19
VIT_18s0001g07120.t01 Wine grape cytosol 75.81 74.41
KRH72427 Soybean cytosol 79.07 73.17
KRH16819 Soybean cytosol 79.07 72.03
Solyc04g074980.2.1 Tomato cytosol 69.98 65.49
PGSC0003DMT400005419 Potato cytosol 68.61 65.25
Os03t0187500-01 Rice cytosol 28.13 65.08
HORVU4Hr1G080360.1 Barley cytosol, peroxisome, plastid 37.39 63.56
AT5G49980.1 Thale cress nucleus 67.24 63.33
CDY21439 Canola cytosol 65.18 62.91
HORVU4Hr1G015730.1 Barley cytosol, peroxisome, plastid 36.02 62.87
Bra000604.1-P Field mustard cytosol, plastid 65.18 62.6
CDX83172 Canola cytosol, plastid 65.18 62.6
CDY03450 Canola cytosol 65.18 62.3
Bra013798.1-P Field mustard cytosol 64.67 62.11
CDY34286 Canola cytosol 64.84 62.07
AT4G24390.1 Thale cress cytosol, plastid 65.52 61.32
GSMUA_Achr3P06710_001 Banana cytosol 59.86 60.91
GSMUA_Achr5P05520_001 Banana cytosol 60.38 59.97
TraesCS7B01G081200.1 Wheat cytosol 63.64 59.36
TraesCS7A01G176200.1 Wheat cytosol 63.46 59.29
TraesCS7D01G177500.1 Wheat cytosol, plastid 63.64 58.98
HORVU6Hr1G077570.1 Barley mitochondrion 63.12 58.6
GSMUA_Achr7P11780_001 Banana cytosol 59.18 58.47
Os02t0759700-01 Rice cytosol 63.64 58.24
TraesCS6B01G345800.1 Wheat plastid 63.12 57.05
TraesCS6A01G315300.1 Wheat plastid 63.29 57.03
TraesCS6D01G294600.1 Wheat plastid 62.95 56.64
Zm00001d052188_P001 Maize plastid 64.49 56.46
Zm00001d018126_P001 Maize plastid 63.98 56.09
EES05842 Sorghum plastid 63.64 56.04
TraesCS4D01G301800.1 Wheat cytosol, nucleus, peroxisome 57.12 54.59
TraesCS4A01G001800.1 Wheat cytosol 56.78 54.44
Zm00001d027975_P001 Maize cytosol 55.57 54.18
EER92735 Sorghum cytosol 55.75 53.99
Zm00001d048233_P001 Maize cytosol 54.72 53.34
KRH70053 Soybean cytosol 49.06 49.91
KRG94665 Soybean cytosol 48.71 49.65
KRH31921 Soybean cytosol 49.57 49.4
KRH06858 Soybean cytosol 48.37 49.3
KRH71533 Soybean cytosol 49.06 48.89
KRH68108 Soybean cytosol 48.89 48.63
KRG96377 Soybean cytosol 48.71 48.38
KRH49941 Soybean cytosol 47.68 48.1
KRH41935 Soybean cytosol 47.68 48.01
HORVU4Hr1G078120.4 Barley cytosol, plastid 56.09 47.95
KRH08397 Soybean cytosol 46.83 47.64
KRH14993 Soybean cytosol 30.19 30.99
KRH73146 Soybean cytosol 30.87 30.82
KRH31107 Soybean cytosol 30.02 29.66
KRG97777 Soybean cytosol 30.02 29.66
Protein Annotations
Gene3D:1.20.1280.50EntrezGene:100799915MapMan:11.2.2.1.1MapMan:19.2.2.8.1.4.6Gene3D:3.80.10.10EMBL:ACUP02002227
InterPro:F-box-like_dom_sfEnsemblPlantsGene:GLYMA_04G093500GO:GO:0003674GO:GO:0005488GO:GO:0005515UniProt:I1JV53
InterPro:IPR032675EnsemblPlants:KRH62206ProteinID:KRH62206ProteinID:KRH62206.1InterPro:LRR_dom_sfInterPro:Leu-rich_rpt_Cys-con_subtyp
PANTHER:PTHR43944PANTHER:PTHR43944:SF8SMART:SM00367SUPFAM:SSF52047SUPFAM:SSF81383UniParc:UPI0002339F39
SEG:seg:::::
Description
hypothetical protein
Coordinates
chr4:+:8293640..8296647
Molecular Weight (calculated)
65823.6 Da
IEP (calculated)
6.276
GRAVY (calculated)
0.001
Length
583 amino acids
Sequence
(BLAST)
001: MNQIDDGRTL SPLPDQVLEN VLESVLHFLT SRRDRNAASL VCKSWYRAEA LTRTELFIGN CYAVSPRRAT GRFPRVRSVT IKGKPRFADF DLMPLNWGAH
101: FTPWVTALSQ SYHSSLNKLH LKRMSLTDHD LTLLSHSLPS FQDLLLTCCE GFGTTALAAL ASNCRLLRVL ELVECVVEVG DEELDWISCF PEIDAQTYLE
201: SLVFDCVECP INLEALERLV ARSPSLRKLR LNRYVSMSQL HRLMHRAPQL THLGTGSFSA SELDQELDFA SAFAACKSLV CLSGFREIWP DYLPAIYPAC
301: ANLISLNFSY ADISADQLIS VIRHCHKLQT FWVLDTICDE GLQAVAETCK DLRELRVFPV NTREEIEGPV SEVGFEAISR GCRKLQSILF FCQRMTNAAV
401: VAMSNNCPDL VVFRLCIIGR YRPDPETLEP MDEGFGAIVM NCKKLTRLAV SGLLTDRAFN YIGTYGKLIR TLSVAFAGDT DLGLQYVLEG CPNLQKLEIR
501: DSPFGDGALR SGLHHFYNMR FLWMSSCKLT RQACREVARM LPHLVLEVIN SEEDKADDIE ILYMYRSLDR PRDDAPKVVT ILC
Best Arabidopsis Sequence Match ( AT5G49980.1 )
(BLAST)
001: MTQDRSEMSE DDDDQQSPPL DLPSTAIADP CSSSSSPNKS RNCISNSQTF PDHVLENVLE NVLQFLDSRC DRNAASLVCK SWWRVEALTR SEVFIGNCYA
101: LSPARLTQRF KRVRSLVLKG KPRFADFNLM PPDWGANFAP WVSTMAQAYP CLEKVDLKRM FVTDDDLALL ADSFPGFKEL ILVCCEGFGT SGISIVANKC
201: RKLKVLDLIE SEVTDDEVDW ISCFPEDVTC LESLAFDCVE APINFKALEG LVARSPFLKK LRLNRFVSLV ELHRLLLGAP QLTSLGTGSF SHDEEPQSEQ
301: EPDYAAAFRA CKSVVCLSGF RELMPEYLPA IFPVCANLTS LNFSYANISP DMFKPIILNC HKLQVFWALD SICDEGLQAV AATCKELREL RIFPFDPRED
401: SEGPVSELGL QAISEGCRKL ESILYFCQRM TNAAVIAMSE NCPELTVFRL CIMGRHRPDH VTGKPMDEGF GAIVKNCKKL TRLAVSGLLT DQAFRYMGEY
501: GKLVRTLSVA FAGDSDMALR HVLEGCPRLQ KLEIRDSPFG DVALRSGMHR YYNMRFVWMS ACSLSKGCCK DIARAMPNLV VEVIGSDDDD DNRDYVETLY
601: MYRSLDGPRN DAPKFVTIL
Arabidopsis Description
AFB5AFB5 [Source:UniProtKB/TrEMBL;Acc:A0A178UB83]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.