Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- vacuole 1
- cytosol 4
- plasma membrane 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH31638 | Soybean | cytosol | 96.0 | 96.0 |
| VIT_05s0020g04420.t01 | Wine grape | cytosol | 91.33 | 91.95 |
| KRG92449 | Soybean | cytosol | 90.67 | 90.67 |
| KRH34350 | Soybean | cytosol | 90.0 | 90.0 |
| Solyc06g053930.2.1 | Tomato | cytosol | 86.0 | 86.58 |
| PGSC0003DMT400042062 | Potato | cytosol | 85.33 | 85.33 |
| GSMUA_Achr2P12680_001 | Banana | cytosol | 82.0 | 83.11 |
| AT4G14640.1 | Thale cress | cytosol | 82.0 | 81.46 |
| Bra023786.1-P | Field mustard | cytosol | 84.0 | 80.77 |
| CDY34215 | Canola | cytosol | 84.0 | 80.77 |
| Bra033898.1-P | Field mustard | cytosol | 82.67 | 80.0 |
| Bra001892.1-P | Field mustard | cytosol | 82.0 | 79.87 |
| CDX92965 | Canola | cytosol | 82.0 | 79.87 |
| GSMUA_Achr7P01390_001 | Banana | cytosol | 78.67 | 79.73 |
| CDY10686 | Canola | cytosol | 82.0 | 79.35 |
| KRG94975 | Soybean | nucleus | 78.67 | 79.19 |
| GSMUA_Achr1P27230_001 | Banana | cytosol | 77.33 | 78.38 |
| GSMUA_Achr1P04700_001 | Banana | cytosol | 77.33 | 78.38 |
| GSMUA_Achr4P22570_001 | Banana | cytosol | 77.33 | 78.38 |
| CDY06478 | Canola | cytosol | 78.0 | 77.48 |
| GSMUA_Achr6P24410_001 | Banana | cytosol | 76.67 | 77.18 |
| Bra039723.1-P | Field mustard | cytosol | 78.0 | 76.47 |
| CDX94883 | Canola | cytosol | 55.33 | 74.77 |
| PGSC0003DMT400034833 | Potato | cytosol | 76.0 | 74.51 |
| KRG96966 | Soybean | cytosol | 73.33 | 73.83 |
| KRH68729 | Soybean | cytosol | 73.33 | 73.83 |
| GSMUA_Achr5P09010_001 | Banana | cytosol | 72.67 | 73.65 |
| CDY10325 | Canola | cytosol | 55.33 | 73.45 |
| Solyc03g005240.1.1 | Tomato | cytosol | 74.0 | 72.55 |
| KRH18664 | Soybean | cytosol | 66.67 | 71.43 |
| AT3G22930.1 | Thale cress | cytosol | 82.0 | 71.1 |
| CDY40824 | Canola | cytosol | 84.0 | 70.0 |
| KRH67274 | Soybean | cytosol | 68.0 | 68.92 |
| KRG95596 | Soybean | cytosol | 66.67 | 67.57 |
| KRH34082 | Soybean | cytosol | 65.33 | 65.77 |
| Os03t0743500-02 | Rice | nucleus | 66.67 | 64.94 |
| KRG92667 | Soybean | cytosol | 64.0 | 64.43 |
| KXG37587 | Sorghum | cytosol | 66.0 | 64.29 |
| KRG94637 | Soybean | cytosol | 46.67 | 61.4 |
| KRG89812 | Soybean | cytosol, mitochondrion | 66.0 | 60.0 |
| KRH71363 | Soybean | cytosol | 56.67 | 57.05 |
| KRH32074 | Soybean | cytosol | 54.0 | 54.36 |
| Zm00001d033980_P001 | Maize | cytosol | 54.0 | 51.59 |
| GSMUA_Achr3P25390_001 | Banana | cytosol | 60.67 | 49.73 |
| TraesCS5A01G382800.2 | Wheat | plastid | 60.67 | 48.66 |
| GSMUA_Achr1P14070_001 | Banana | cytosol | 69.33 | 46.02 |
| KRH28027 | Soybean | cytosol, endoplasmic reticulum, nucleus | 44.0 | 44.9 |
| KRH77406 | Soybean | cytosol, endoplasmic reticulum, mitochondrion, nucleus | 44.0 | 44.9 |
| KRH25249 | Soybean | cytosol | 44.67 | 41.1 |
| KRH30413 | Soybean | cytosol | 43.33 | 40.88 |
| KRH04023 | Soybean | cytosol | 40.0 | 40.82 |
| KRH10567 | Soybean | endoplasmic reticulum | 42.67 | 37.65 |
| KRH62961 | Soybean | cytosol | 38.0 | 35.62 |
| KRH07628 | Soybean | cytosol | 38.0 | 35.62 |
| KRH56721 | Soybean | cytosol | 38.0 | 35.4 |
| KRH43884 | Soybean | cytosol | 29.33 | 33.59 |
| KRH54782 | Soybean | cytosol | 35.33 | 33.12 |
| KRG98826 | Soybean | cytosol | 33.33 | 31.85 |
| KRG98823 | Soybean | cytosol | 32.0 | 30.57 |
| KXG37588 | Sorghum | mitochondrion, nucleus | 1.33 | 1.46 |
Protein Annotations
| EMBL:ACUP02000687 | EnsemblPlants:KRH69070 | EnsemblPlantsGene:GLYMA_02G002100 | Gene3D:1.10.238.10 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005509 | InterPro:EF-hand-dom_pair | InterPro:EF_Hand_1_Ca_BS | InterPro:EF_hand_dom | InterPro:IPR002048 | PANTHER:PTHR23050 |
| PANTHER:PTHR23050:SF336 | PFAM:PF13499 | PFscan:PS50222 | ProteinID:KRH69070 | ProteinID:KRH69070.1 | ScanProsite:PS00018 |
| SMART:SM00054 | SUPFAM:SSF47473 | UniParc:UPI00023BEBF9 | UniProt:I1JB53 | MapMan:35.1 | : |
Description
hypothetical protein
Coordinates
chr2:+:247328..250095
Molecular Weight (calculated)
17002.8 Da
IEP (calculated)
3.688
GRAVY (calculated)
-0.497
Length
150 amino acids
Sequence
(BLAST)
(BLAST)
001: MADVLSEEQI SEIKEAFGLF DKDGDGCITV EELATVIRSL DQNPTEEELQ DMINEVDADG NGTIEFVEFL NLMAKKMKET DEEEDLKEAF KVFDKDQNGY
101: ISASELRHVM INLGEKLTDE EVEQMIEEAD LDGDGQVNYD EFVKMMMTIG
101: ISASELRHVM INLGEKLTDE EVEQMIEEAD LDGDGQVNYD EFVKMMMTIG
001: MEEIQQQQQQ QQQQQQQQQQ QQQQQQELTQ EQIMEFKEAF CLFDKDGDGC ITADELATVI RSLDQNPTEQ ELQDMITEID SDGNGTIEFS EFLNLMANQL
101: QETDADEELK EAFKVFDKDQ NGYISASELR HVMINLGEKL TDEEVDQMIK EADLDGDGQV NYDEFVRMMM ING
101: QETDADEELK EAFKVFDKDQ NGYISASELR HVMINLGEKL TDEEVDQMIK EADLDGDGQV NYDEFVRMMM ING
Arabidopsis Description
CML11Calmodulin-like protein 11 [Source:UniProtKB/Swiss-Prot;Acc:Q9LIK5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.