CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
KRH31638
KRH69070

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G51170.1	KRH31638	AT4G14640.1	17360592
AT1G51170.1	KRH69070	AT4G14640.1	17360592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH24685	Soybean	cytosol	68.39	63.01
KRH29689	Soybean	cytosol	65.54	61.56
Bra018898.1-P	Field mustard	cytosol	45.6	61.32
VIT_06s0004g01780.t01	Wine grape	cytosol	63.99	60.24
CDY25216	Canola	cytosol	56.74	57.63
Solyc11g061720.1.1	Tomato	cytosol	59.84	57.46
CDY22830	Canola	cytosol, plastid	56.48	57.37
GSMUA_Achr5P22330_001	Banana	cytosol	46.63	57.32
PGSC0003DMT400054224	Potato	cytosol	60.88	57.04
AT1G51170.1	Thale cress	plastid	58.81	56.19
AT3G20830.1	Thale cress	cytosol, plastid	59.33	56.13
CDY06386	Canola	nucleus, plastid	58.29	56.11
CDY19600	Canola	plastid	58.03	55.58
Bra035740.1-P	Field mustard	plastid	57.77	55.34
GSMUA_Achr7P02080_001	Banana	cytosol, mitochondrion	51.55	50.25
Os08t0504800-01	Rice	cytosol	54.92	50.12
Zm00001d020927_P001	Maize	cytosol	54.66	47.95
EER99080	Sorghum	cytosol, nucleus, peroxisome	53.89	47.49
TraesCS7A01G244900.1	Wheat	cytosol	52.85	47.44
TraesCS7B01G146500.1	Wheat	cytosol	52.33	47.2
TraesCS5A01G263600.1	Wheat	cytosol	53.63	47.15
TraesCS7D01G243600.1	Wheat	cytosol	51.81	46.84
TraesCS5B01G263000.1	Wheat	cytosol	53.37	46.82
Zm00001d006017_P001	Maize	cytosol	52.85	46.58
EES15407	Sorghum	cytosol	53.37	46.5
Zm00001d031426_P001	Maize	cytosol	52.59	45.93
Os09t0486700-01	Rice	cytosol	53.89	45.71
TraesCS5D01G271200.1	Wheat	cytosol	53.63	44.23
HORVU5Hr1G072930.1	Barley	mitochondrion	52.33	43.44
TraesCS7A01G426500.1	Wheat	cytosol	15.03	43.28
HORVU7Hr1G050240.1	Barley	mitochondrion	52.59	43.19
TraesCS5A01G192800.1	Wheat	cytosol	14.77	42.22
KRH45318	Soybean	cytosol	18.65	40.0
KRH07383	Soybean	cytosol	40.67	36.18
KRH66186	Soybean	cytosol	38.86	34.4
KRH46605	Soybean	cytosol	37.82	32.81
KRH10351	Soybean	nucleus, plastid	36.53	14.66
KRH22966	Soybean	nucleus, plastid	36.27	14.26
KRH24973	Soybean	cytosol	35.49	14.02
KRH07591	Soybean	cytosol	34.97	13.64
KRH45326	Soybean	cytosol	16.32	7.72

Protein Annotations

EntrezGene:100802613	MapMan:18.4.6.5	EMBL:ACUP02008457	InterPro:AGC-kinase_C	EnsemblPlantsGene:GLYMA_13G341400	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737	GO:GO:0005886
GO:GO:0006464	GO:GO:0006468	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016020	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0019538
GO:GO:0035556	UniProt:I1M525	InterPro:IPR000719	InterPro:IPR000961	EnsemblPlants:KRH23156	ProteinID:KRH23156
ProteinID:KRH23156.1	InterPro:Kinase-like_dom_sf	PFAM:PF00069	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011
PFscan:PS51285	PANTHER:PTHR24351	PANTHER:PTHR24351:SF107	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220
SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI000233AF3C	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr13:+:43310896..43312589

Molecular Weight (calculated)

43530.4 Da

IEP (calculated)

10.207

GRAVY (calculated)

-0.349

Length

386 amino acids

Sequence
(BLAST)

001: MAEELKLDNL KAVKVLGKGG MGTVFLVQLE NNNSHVALKV VDKSSSHHDA PRRARWEMNV LSRLSHSHPF LPSLLGSFHS QNLMGWAVPY CPGGDLNALR
101: YRQTDHVFSP AVIRFYVAEI LCALQHLHSM NIAYRDLKPE NVLIQQSGHV TLTDFDLSRT LSPSVNIPSN TTTPPPSRKH RRWVPLPLPL HAKNKNPKPA
201: RVSPVNRRKL SFVRSTSFVG TEEYIAPEVL RAEGHDFSVD WWALGVLTYE MLYGTTPFKG TNRKETFRNV LFKPPEFVGK KTALTDLIMG LLEKDPTKRL
301: GYVRGASEIK EHQFFRGVKW DLLTEVLRPP FIPSRDDVDA TTTKSFAAGL DIKGYFQSLK SPPSLPPSPL RSPSFEFQNN VSLPEF

Best Arabidopsis Sequence Match ( AT1G51170.1 )
(BLAST)

001: METRPSSSSS LSPATNLNLD RLKVLKLLGK GATGTVFLVH DSVSDSSVSS PFALKLVDKS SASSLRRARW EIQILRRLSD DTNPNPFLPK LLASSESSEF
101: IAWALPYCSG GDLNVLRQRQ NDGVFSSSVI KFYLAEIVCA LDHLHTMGIA YRDLKPENIL LQESGHVTLT DFDLSCSLNK PTRPEFYHLS DPEPDPNPES
201: NLSHNKKSLR IFRQKKKKTK SARVNPITRR RLSFSGGERS NSFVGTDEYI SPEVIRGDGH DFAVDWWALG VLTYEMMYGE TPFKGRNKKE TFRNVLVKEP
301: EFAGKPSDLT DLIRRLLVKD PTKRFGFWRG AAEIKEHAFF KGVRWELLTE VLRPPFIPLR DDGDLTGKVT EESGFGIKEY FEKLKTPPLP LPHECSENNP
401: FVDF

Arabidopsis Description

UNCSerine/threonine-protein kinase UCN [Source:UniProtKB/Swiss-Prot;Acc:Q9SYB9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.