Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 3
- cytosol 3
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Bra039723.1-P |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G51170.1 | Bra039723.1-P | AT4G14640.1 | 17360592 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY22830 | Canola | cytosol, plastid | 99.3 | 75.0 |
| CDY25216 | Canola | cytosol | 97.21 | 73.42 |
| AT1G51170.1 | Thale cress | plastid | 89.9 | 63.86 |
| Bra035740.1-P | Field mustard | plastid | 76.66 | 54.59 |
| GSMUA_Achr5P22330_001 | Banana | cytosol | 51.22 | 46.82 |
| KRH23156 | Soybean | cytosol | 61.32 | 45.6 |
| VIT_06s0004g01780.t01 | Wine grape | cytosol | 63.76 | 44.63 |
| KRH29689 | Soybean | cytosol | 63.76 | 44.53 |
| KRH24685 | Soybean | cytosol | 64.11 | 43.91 |
| Solyc11g061720.1.1 | Tomato | cytosol | 59.93 | 42.79 |
| PGSC0003DMT400054224 | Potato | cytosol | 60.28 | 41.99 |
| TraesCS7A01G426500.1 | Wheat | cytosol | 19.51 | 41.79 |
| Bra033907.1-P | Field mustard | cytosol | 23.0 | 41.51 |
| TraesCS5A01G192800.1 | Wheat | cytosol | 18.82 | 40.0 |
| GSMUA_Achr7P02080_001 | Banana | cytosol, mitochondrion | 53.66 | 38.89 |
| TraesCS5A01G263600.1 | Wheat | cytosol | 55.4 | 36.22 |
| Zm00001d020927_P001 | Maize | cytosol | 55.4 | 36.14 |
| EER99080 | Sorghum | cytosol, nucleus, peroxisome | 55.05 | 36.07 |
| TraesCS5B01G263000.1 | Wheat | cytosol | 54.7 | 35.68 |
| Os08t0504800-01 | Rice | cytosol | 52.26 | 35.46 |
| Os09t0486700-01 | Rice | cytosol | 56.1 | 35.38 |
| TraesCS7D01G243600.1 | Wheat | cytosol | 52.61 | 35.36 |
| TraesCS7A01G244900.1 | Wheat | cytosol | 52.96 | 35.35 |
| TraesCS7B01G146500.1 | Wheat | cytosol | 52.61 | 35.28 |
| Zm00001d006017_P001 | Maize | cytosol | 53.66 | 35.16 |
| TraesCS5D01G271200.1 | Wheat | cytosol | 55.05 | 33.76 |
| EES15407 | Sorghum | cytosol | 50.87 | 32.96 |
| HORVU5Hr1G072930.1 | Barley | mitochondrion | 53.31 | 32.9 |
| Zm00001d031426_P001 | Maize | cytosol | 50.52 | 32.81 |
| HORVU7Hr1G050240.1 | Barley | mitochondrion | 52.96 | 32.34 |
| Bra015120.1-P | Field mustard | cytosol | 43.21 | 29.95 |
| Bra002669.1-P | Field mustard | cytosol | 36.59 | 11.9 |
| Bra020388.1-P | Field mustard | cytosol | 36.24 | 11.8 |
| Bra006782.1-P | Field mustard | cytosol | 36.93 | 11.75 |
| Bra019474.1-P | Field mustard | nucleus, plastid | 30.31 | 9.03 |
Protein Annotations
| Gene3D:1.10.510.10 | MapMan:18.4.6.5 | InterPro:AGC-kinase_C | EnsemblPlantsGene:Bra018898 | EnsemblPlants:Bra018898.1 | EnsemblPlants:Bra018898.1-P |
| GO:GO:0000003 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004672 | GO:GO:0004674 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0005737 | GO:GO:0005886 | GO:GO:0006464 | GO:GO:0006468 | GO:GO:0007275 |
| GO:GO:0008134 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009791 | GO:GO:0009908 | GO:GO:0009987 |
| GO:GO:0016020 | GO:GO:0016301 | GO:GO:0016310 | GO:GO:0016740 | GO:GO:0019538 | GO:GO:0036290 |
| GO:GO:0051782 | GO:GO:0080060 | InterPro:IPR000719 | InterPro:IPR000961 | InterPro:Kinase-like_dom_sf | UniProt:M4DQV5 |
| PFAM:PF00069 | PIRSF:PIRSF000654 | ScanProsite:PS00108 | PFscan:PS50011 | PFscan:PS51285 | PANTHER:PTHR24351 |
| PANTHER:PTHR24351:SF107 | InterPro:Prot_kinase_dom | SMART:SM00220 | SUPFAM:SSF56112 | InterPro:Ser/Thr_kinase_AS | UniParc:UPI000253E9FD |
Description
AT3G20830 (E=9e-122) | protein kinase family protein
Coordinates
chrA06:+:1382085..1382948
Molecular Weight (calculated)
32917.4 Da
IEP (calculated)
8.461
GRAVY (calculated)
-0.525
Length
287 amino acids
Sequence
(BLAST)
(BLAST)
001: MPYCSGGDLN VLRHRQNDGV FSSSVIKFYL AEILCALDHL HSMGIAYRDL KPENILLQES GHVTLTDFDL SCSLNKPTRP EFYLSDPEPD PKLKTSLRFF
101: RQKKKTKSAR VNPITRRRMS FSGGERSNSF VGTDEYISPE VIRGDGHDFA VDWWALGVLT YEMMYGATPF KGRSKKETFR NVLMKEPEFP GKPSDLTDLI
201: RRLLAKDPTR RLGFRRGAAE IKEHAFFRGV KWEILTEVLR PPFIPLRDDG ESTENVTACG FGVKEYFEKL RTPLPHECPE NNPFVDF
101: RQKKKTKSAR VNPITRRRMS FSGGERSNSF VGTDEYISPE VIRGDGHDFA VDWWALGVLT YEMMYGATPF KGRSKKETFR NVLMKEPEFP GKPSDLTDLI
201: RRLLAKDPTR RLGFRRGAAE IKEHAFFRGV KWEILTEVLR PPFIPLRDDG ESTENVTACG FGVKEYFEKL RTPLPHECPE NNPFVDF
001: METRPSSSSS LSPATNLNLD RLKVLKLLGK GATGTVFLVH DSVSDSSVSS PFALKLVDKS SASSLRRARW EIQILRRLSD DTNPNPFLPK LLASSESSEF
101: IAWALPYCSG GDLNVLRQRQ NDGVFSSSVI KFYLAEIVCA LDHLHTMGIA YRDLKPENIL LQESGHVTLT DFDLSCSLNK PTRPEFYHLS DPEPDPNPES
201: NLSHNKKSLR IFRQKKKKTK SARVNPITRR RLSFSGGERS NSFVGTDEYI SPEVIRGDGH DFAVDWWALG VLTYEMMYGE TPFKGRNKKE TFRNVLVKEP
301: EFAGKPSDLT DLIRRLLVKD PTKRFGFWRG AAEIKEHAFF KGVRWELLTE VLRPPFIPLR DDGDLTGKVT EESGFGIKEY FEKLKTPPLP LPHECSENNP
401: FVDF
101: IAWALPYCSG GDLNVLRQRQ NDGVFSSSVI KFYLAEIVCA LDHLHTMGIA YRDLKPENIL LQESGHVTLT DFDLSCSLNK PTRPEFYHLS DPEPDPNPES
201: NLSHNKKSLR IFRQKKKKTK SARVNPITRR RLSFSGGERS NSFVGTDEYI SPEVIRGDGH DFAVDWWALG VLTYEMMYGE TPFKGRNKKE TFRNVLVKEP
301: EFAGKPSDLT DLIRRLLVKD PTKRFGFWRG AAEIKEHAFF KGVRWELLTE VLRPPFIPLR DDGDLTGKVT EESGFGIKEY FEKLKTPPLP LPHECSENNP
401: FVDF
Arabidopsis Description
UNCSerine/threonine-protein kinase UCN [Source:UniProtKB/Swiss-Prot;Acc:Q9SYB9]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.