Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 2
- mitochondrion 1
- cytoskeleton 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| TraesCS5A01G382800.2 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G51170.1 | TraesCS5A01G382800.2 | AT4G14640.1 | 17360592 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5A01G263600.1 | Wheat | cytosol | 96.82 | 97.04 |
| TraesCS5D01G271200.1 | Wheat | cytosol | 97.05 | 91.24 |
| HORVU5Hr1G072930.1 | Barley | mitochondrion | 95.23 | 90.11 |
| Zm00001d020927_P001 | Maize | cytosol | 76.59 | 76.59 |
| EER99080 | Sorghum | cytosol, nucleus, peroxisome | 75.68 | 76.03 |
| Os09t0486700-01 | Rice | cytosol | 77.73 | 75.16 |
| Zm00001d006017_P001 | Maize | cytosol | 73.18 | 73.52 |
| TraesCS7B01G146500.1 | Wheat | cytosol | 61.36 | 63.08 |
| GSMUA_Achr5P22330_001 | Banana | cytosol | 44.32 | 62.1 |
| GSMUA_Achr7P02080_001 | Banana | cytosol, mitochondrion | 51.36 | 57.07 |
| Bra018898.1-P | Field mustard | cytosol | 35.68 | 54.7 |
| KRH23156 | Soybean | cytosol | 46.82 | 53.37 |
| VIT_06s0004g01780.t01 | Wine grape | cytosol | 48.41 | 51.95 |
| KRH29689 | Soybean | cytosol | 48.18 | 51.58 |
| CDY22830 | Canola | cytosol, plastid | 44.09 | 51.05 |
| CDY25216 | Canola | cytosol | 43.86 | 50.79 |
| PGSC0003DMT400054224 | Potato | cytosol | 47.27 | 50.49 |
| Solyc11g061720.1.1 | Tomato | cytosol | 45.68 | 50.0 |
| KRH24685 | Soybean | cytosol | 47.5 | 49.88 |
| AT3G20830.1 | Thale cress | cytosol, plastid | 44.32 | 47.79 |
| AT1G51170.1 | Thale cress | plastid | 43.86 | 47.77 |
| CDY19600 | Canola | plastid | 43.41 | 47.39 |
| CDY06386 | Canola | nucleus, plastid | 43.18 | 47.38 |
| Bra035740.1-P | Field mustard | plastid | 42.95 | 46.9 |
| TraesCS6B01G244600.1 | Wheat | plastid | 36.82 | 37.07 |
| TraesCS2B01G365900.1 | Wheat | cytosol | 36.82 | 35.6 |
| TraesCS2B01G290500.1 | Wheat | cytosol | 30.23 | 14.88 |
| TraesCS5B01G155200.4 | Wheat | cytosol | 30.91 | 14.23 |
Protein Annotations
| Gene3D:1.10.510.10 | MapMan:18.4.6.5 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004672 |
| GO:GO:0005488 | GO:GO:0005524 | GO:GO:0006464 | GO:GO:0006468 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009987 | GO:GO:0016301 | GO:GO:0016740 | GO:GO:0019538 | InterPro:IPR000719 | InterPro:Kinase-like_dom_sf |
| PFAM:PF00069 | ScanProsite:PS00107 | ScanProsite:PS00108 | PFscan:PS50011 | PANTHER:PTHR24351 | PANTHER:PTHR24351:SF167 |
| InterPro:Prot_kinase_dom | InterPro:Protein_kinase_ATP_BS | SMART:SM00220 | SUPFAM:SSF56112 | InterPro:Ser/Thr_kinase_AS | EnsemblPlantsGene:TraesCS5B01G263000 |
| EnsemblPlants:TraesCS5B01G263000.1 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr5B:+:447558418..447559740
Molecular Weight (calculated)
47761.4 Da
IEP (calculated)
7.963
GRAVY (calculated)
-0.312
Length
440 amino acids
Sequence
(BLAST)
(BLAST)
001: MQPVAGTGLM DIDLGAARAA RVLGRGAMGT VFLVAADEAE AEYVLKVFDK RSHAAAPPGR AEDAARRARW EVSVLSRLAH PHLPSLLGRA ETPDLLAWAM
101: PYCAGGDLNE LRRAQPDRVF SPAAVRFYAA ELVSALADLH AAGIAYRDLK PENVLLRADG HVTLTDFDLS RLLPPKSPSA STCTSASSPC SSATPSPTAP
201: KPHGRQYRHL RRIFARSESS VAASSGQEPH NLAWYLNRSD GGVDKLKKAK SARASTSLGR GKNHASFRSA ASGGVACERS FSFVGTEEYV APEVVRGDGH
301: EFSVDWWALG VLVYEMAFGR TPFRGRNRKE TFRNVLLREP EFSADVGRRW PDLTDLISRL LDKDPARRLG FSGGADEVRA HPFFAGVAWD LLGEVSRPPY
401: IPPPADDIVA CEGFGVVDYF QKLHQPPPQP DGSPESLPEF
101: PYCAGGDLNE LRRAQPDRVF SPAAVRFYAA ELVSALADLH AAGIAYRDLK PENVLLRADG HVTLTDFDLS RLLPPKSPSA STCTSASSPC SSATPSPTAP
201: KPHGRQYRHL RRIFARSESS VAASSGQEPH NLAWYLNRSD GGVDKLKKAK SARASTSLGR GKNHASFRSA ASGGVACERS FSFVGTEEYV APEVVRGDGH
301: EFSVDWWALG VLVYEMAFGR TPFRGRNRKE TFRNVLLREP EFSADVGRRW PDLTDLISRL LDKDPARRLG FSGGADEVRA HPFFAGVAWD LLGEVSRPPY
401: IPPPADDIVA CEGFGVVDYF QKLHQPPPQP DGSPESLPEF
001: METRPSSSSS LSPATNLNLD RLKVLKLLGK GATGTVFLVH DSVSDSSVSS PFALKLVDKS SASSLRRARW EIQILRRLSD DTNPNPFLPK LLASSESSEF
101: IAWALPYCSG GDLNVLRQRQ NDGVFSSSVI KFYLAEIVCA LDHLHTMGIA YRDLKPENIL LQESGHVTLT DFDLSCSLNK PTRPEFYHLS DPEPDPNPES
201: NLSHNKKSLR IFRQKKKKTK SARVNPITRR RLSFSGGERS NSFVGTDEYI SPEVIRGDGH DFAVDWWALG VLTYEMMYGE TPFKGRNKKE TFRNVLVKEP
301: EFAGKPSDLT DLIRRLLVKD PTKRFGFWRG AAEIKEHAFF KGVRWELLTE VLRPPFIPLR DDGDLTGKVT EESGFGIKEY FEKLKTPPLP LPHECSENNP
401: FVDF
101: IAWALPYCSG GDLNVLRQRQ NDGVFSSSVI KFYLAEIVCA LDHLHTMGIA YRDLKPENIL LQESGHVTLT DFDLSCSLNK PTRPEFYHLS DPEPDPNPES
201: NLSHNKKSLR IFRQKKKKTK SARVNPITRR RLSFSGGERS NSFVGTDEYI SPEVIRGDGH DFAVDWWALG VLTYEMMYGE TPFKGRNKKE TFRNVLVKEP
301: EFAGKPSDLT DLIRRLLVKD PTKRFGFWRG AAEIKEHAFF KGVRWELLTE VLRPPFIPLR DDGDLTGKVT EESGFGIKEY FEKLKTPPLP LPHECSENNP
401: FVDF
Arabidopsis Description
UNCSerine/threonine-protein kinase UCN [Source:UniProtKB/Swiss-Prot;Acc:Q9SYB9]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.