Factsheet for TraesCS6B01G244600.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS1A01G435300.1
TraesCS1B01G471100.1
TraesCS1D01G444300.1
TraesCS4A01G106400.1
TraesCS4A01G262800.1
TraesCS4B01G052100.1
TraesCS4B01G197800.1
TraesCS4D01G198600.1
TraesCS7A01G111300.1
TraesCS7B01G009200.1
TraesCS7D01G106400.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G25250.1	TraesCS7A01G111300.1	AT2G43790.1	21276203
AT3G25250.1	TraesCS7B01G009200.1	AT2G43790.1	21276203
AT3G25250.1	TraesCS7D01G106400.1	AT2G43790.1	21276203
AT3G25250.1	TraesCS4A01G106400.1	AT3G45640.1	21276203
AT3G25250.1	TraesCS4B01G197800.1	AT3G45640.1	21276203
AT3G25250.1	TraesCS4D01G198600.1	AT3G45640.1	21276203
AT4G13000.1	TraesCS1A01G435300.1	AT2G41970.1	21798944
AT4G13000.1	TraesCS1B01G471100.1	AT2G41970.1	21798944
AT4G13000.1	TraesCS1D01G444300.1	AT2G41970.1	21798944
AT4G13000.1	TraesCS4A01G262800.1	AT2G41970.1	21798944
AT4G13000.1	TraesCS4B01G052100.1	AT2G41970.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6A01G214800.1	Wheat	cytosol	95.19	96.07
TraesCS6D01G197300.1	Wheat	plastid	94.97	95.62
HORVU6Hr1G054770.3	Barley	plastid	94.28	94.5
Zm00001d017135_P001	Maize	cytosol	71.17	71.17
Os02t0603000-00	Rice	cytosol, endoplasmic reticulum, plastid	72.54	70.92
EES07111	Sorghum	plastid	71.17	62.45
TraesCS2B01G365900.1	Wheat	cytosol	62.7	60.22
GSMUA_AchrUn_...	Banana	cytosol	46.0	56.46
AT4G13000.1	Thale cress	cytosol	42.11	49.46
CDY27899	Canola	cytosol	44.39	46.97
CDY00833	Canola	cytosol	43.94	46.94
Bra015120.1-P	Field mustard	cytosol	44.39	46.86
AT3G25250.1	Thale cress	cytosol	42.79	44.42
PGSC0003DMT400016996	Potato	cytosol, plastid	42.11	44.23
GSMUA_Achr9P07870_001	Banana	plastid	47.37	44.04
Solyc09g056430.2.1	Tomato	cytosol	39.82	43.94
KRH07383	Soybean	cytosol	41.88	42.17
KRH66186	Soybean	cytosol	41.88	41.97
KRH46605	Soybean	cytosol	40.96	40.22
TraesCS5B01G263000.1	Wheat	cytosol	37.07	36.82
TraesCS7B01G146500.1	Wheat	cytosol	35.24	35.98
TraesCS2B01G290500.1	Wheat	cytosol	28.6	13.98
TraesCS5B01G155200.4	Wheat	cytosol	29.06	13.28

Protein Annotations

Gene3D:1.10.510.10	Gene3D:3.30.200.20	MapMan:50.2.7	InterPro:AGC-kinase_C	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464
GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740
GO:GO:0019538	InterPro:IPR000719	InterPro:IPR000961	InterPro:Kinase-like_dom_sf	PFAM:PF00069	ScanProsite:PS00108
PFscan:PS50011	PFscan:PS51285	PANTHER:PTHR24351	PANTHER:PTHR24351:SF72	InterPro:Prot_kinase_dom	SMART:SM00220
SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	EnsemblPlantsGene:TraesCS6B01G244600	EnsemblPlants:TraesCS6B01G244600.1	SEG:seg	:

Description

No Description!

Coordinates

chr6B:-:436671927..436709749

Molecular Weight (calculated)

46488.2 Da

IEP (calculated)

8.484

GRAVY (calculated)

-0.202

Length

437 amino acids

Sequence
(BLAST)

001: MVSTAPMPPP PPQLSLADLR AMSVLGHGAR GVVFHVVPVV AAAAGGGCSA DQPMALKAMS RAAARQKSAA GEPAPGGDGL RRIWFERDVL LAVRHPLLPS
101: LRGVVATEAV VGFAIDRCAG GDLNSLRRRQ AGRAFSDAAI RFYAAELVLV LEHLHGLGVV YRDLKPDNVL IQGSGHIMLV DFDLSTSLPP PLPPPPPDTS
201: SPSPSSSLSP NSSRRCNCKR KNNKTLIFGH FSSRRAASPE SSSSSSTTSR AASPASSSSC CSSPGARTNP AKSNSFVGTE YYVAPEVVAG SGGHDYAVDW
301: WGLGVVLYEM LYGRTPFRGR SRRETFQRVL TAQPELPGEP TPLRDLIARL LEKDSSKRLG ANGVKRHAFF RGVCWDRVLD VAQPPFIPMP DDDSAGSGAD
401: AETLDVEKVV RETFALSVTG TSEEKPDGGD NDFSIFF

Best Arabidopsis Sequence Match ( AT1G51170.1 )
(BLAST)

001: METRPSSSSS LSPATNLNLD RLKVLKLLGK GATGTVFLVH DSVSDSSVSS PFALKLVDKS SASSLRRARW EIQILRRLSD DTNPNPFLPK LLASSESSEF
101: IAWALPYCSG GDLNVLRQRQ NDGVFSSSVI KFYLAEIVCA LDHLHTMGIA YRDLKPENIL LQESGHVTLT DFDLSCSLNK PTRPEFYHLS DPEPDPNPES
201: NLSHNKKSLR IFRQKKKKTK SARVNPITRR RLSFSGGERS NSFVGTDEYI SPEVIRGDGH DFAVDWWALG VLTYEMMYGE TPFKGRNKKE TFRNVLVKEP
301: EFAGKPSDLT DLIRRLLVKD PTKRFGFWRG AAEIKEHAFF KGVRWELLTE VLRPPFIPLR DDGDLTGKVT EESGFGIKEY FEKLKTPPLP LPHECSENNP
401: FVDF

Arabidopsis Description

UNCSerine/threonine-protein kinase UCN [Source:UniProtKB/Swiss-Prot;Acc:Q9SYB9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.