Factsheet for PGSC0003DMT400016996

Subcellular Localization

min:

: max

Winner_takes_all: cytosol, plastid

Predictor Summary:

plastid 4
cytosol 2
nucleus 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
PGSC0003DMT400029698
PGSC0003DMT400044212
PGSC0003DMT400060941
PGSC0003DMT400067689
PGSC0003DMT400077272

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G25250.1	PGSC0003DMT400077272	AT3G45640.1	21276203
AT4G13000.1	PGSC0003DMT400029698	AT2G41970.1	21798944
AT4G13000.1	PGSC0003DMT400044212	AT2G41970.1	21798944
AT4G13000.1	PGSC0003DMT400060941	AT2G41970.1	21798944
AT4G13000.1	PGSC0003DMT400067689	AT2G41970.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc09g056430.2.1	Tomato	cytosol	86.54	90.91
AT4G13000.1	Thale cress	cytosol	52.4	58.6
GSMUA_AchrUn_...	Banana	cytosol	47.36	55.34
CDY00833	Canola	cytosol	52.88	53.79
CDY27899	Canola	cytosol	53.37	53.75
Bra015120.1-P	Field mustard	cytosol	53.37	53.62
AT3G25250.1	Thale cress	cytosol	54.09	53.44
KRH07383	Soybean	cytosol	53.12	50.92
KRH66186	Soybean	cytosol	52.64	50.23
KRH46605	Soybean	cytosol	49.04	45.84
Zm00001d003228_P001	Maize	cytosol, plastid	49.28	45.05
TraesCS2B01G365900.1	Wheat	cytosol	48.8	44.62
EES11030	Sorghum	cytosol	49.28	44.47
Os04t0488700-01	Rice	cytosol	49.04	44.16
TraesCS2A01G347400.1	Wheat	cytosol	48.32	43.98
Zm00001d025735_P001	Maize	cytosol	48.56	43.25
GSMUA_Achr9P07870_001	Banana	plastid	48.8	43.19
Os02t0603000-00	Rice	cytosol, endoplasmic reticulum, plastid	45.67	42.51
TraesCS6A01G214800.1	Wheat	cytosol	44.23	42.49
TraesCS6D01G197300.1	Wheat	plastid	44.23	42.4
TraesCS6B01G244600.1	Wheat	plastid	44.23	42.11
HORVU6Hr1G054770.3	Barley	plastid	43.99	41.97
Zm00001d017135_P001	Maize	cytosol	43.99	41.88
Zm00001d017533_P001	Maize	cytosol, endoplasmic reticulum, mitochondrion, vacuole	31.01	41.48
HORVU0Hr1G005020.4	Barley	cytosol, mitochondrion	41.59	41.39
PGSC0003DMT400054224	Potato	cytosol	40.14	40.53
EES07111	Sorghum	plastid	43.51	36.35
PGSC0003DMT400015050	Potato	cytosol	14.9	29.81
PGSC0003DMT400065251	Potato	cytosol	32.69	13.32

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:102580814	MapMan:18.4.6.5	Gene3D:3.30.200.20	InterPro:AGC-kinase_C	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524
GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301
GO:GO:0016310	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:IPR000961	InterPro:Kinase-like_dom_sf
UniProt:M1A8F9	PFAM:PF00069	EnsemblPlantsGene:PGSC0003DMG400006639	PGSC:PGSC0003DMG400006639	EnsemblPlants:PGSC0003DMT400016996	ScanProsite:PS00108
PFscan:PS50011	PFscan:PS51285	PANTHER:PTHR24351	PANTHER:PTHR24351:SF69	InterPro:Prot_kinase_dom	SMART:SM00220
SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0002955FF6	RefSeq:XP_006361323.1	SEG:seg	:

Description

Kinase family protein [Source:PGSC_GENE;Acc:PGSC0003DMG400006639]

Coordinates

chr9:+:20976834..20978429

Molecular Weight (calculated)

47123.5 Da

IEP (calculated)

6.451

GRAVY (calculated)

-0.365

Length

416 amino acids

Sequence
(BLAST)

001: MLRSLPSAMN NLGKPEIASI QLRSLKVISA LGRGAKGVVF LVQTEDGELL ALKTILRASI EKNKGSTNSE YRRIYLERDV LNSFQHPLLP KLKGVVSTDK
101: IVGYAIDYCS GGDLNSLRKK QTEKMFSDDT VRFYAAELVL ALEHLHGSGI VYRDLKPENV MIQENGHIML IDFDLSTKLP HKSTPEAPQI ETAKLSVQTA
201: SKSKKKNRFS RFNKFRNSEI SPDDSIHSAR LATLEFDPIE KSNSFVGTEE YLSPEIILGN GHDFSVDWWC LGVVLYEMLY GTTPFRGSNR KETYYRILSK
301: APDLVGEATP LRNLINKLLE KDPKQRISVD EIKGHDFFRS VDWDLIVQLP RPPFIPAPLD EELSILKGNK EIDVELFVQG VFKVEEEEHD EHCKMNSQAN
401: HGDEINVTQI DKFLVF

Best Arabidopsis Sequence Match ( AT3G25250.1 )
(BLAST)

001: MLEGDEKQSR ALDFNRLEVL SLLGRGAKGV VFLVRDDDAK LLALKVILKE AIEKKKKGRE SEDDEYKRVS FEQGVLSRFD HPLFPSLHGV LATDKVIGYA
101: IDYCPGQNLN SLRKMQSESM FSDEIIRFYA AELVLALDYL HNQGIVYRDL KPDNVMIQEN GHLMLIDFDL STNLAPRTPQ PSPSLSKPSP TMKRKKRLFR
201: FTSFCNSGIS PQESISVHSS STLAVSDSSG EKSNSFVGTE EYVAPEVISG DGHDFAVDWW SLGVVLYEML YGATPFRGSN RKETFYRILS KPPNLTGETT
301: SLRDLIRRLL EKDPSRRINV EEIKGHDFFR GVDWEKVILV SRPPYIPAPD DGGDKGTDVN TKMDVENIVQ EIFAARQERE KQSGDNNKNA NMKIKDNTSG
401: EWVKGLNNNH DLESDNNFLV F

Arabidopsis Description

OXI1Serine/threonine-protein kinase OXI1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LSF1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.