Factsheet for PGSC0003DMT400060941

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
plasma membrane 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc10g080580.1.1	Tomato	cytosol	98.36	98.63
PGSC0003DMT400029698	Potato	cytosol	90.16	89.43
PGSC0003DMT400067689	Potato	cytosol	87.43	86.72
VIT_08s0007g06750.t01	Wine grape	cytosol	82.79	83.24
CDY64576	Canola	cytosol	82.24	82.02
CDY06890	Canola	cytosol	81.97	81.97
KRH67091	Soybean	cytosol	81.97	81.97
AT2G41970.1	Thale cress	cytosol	81.69	81.92
KRG95420	Soybean	cytosol	81.69	81.92
CDX79897	Canola	cytosol	81.97	81.74
Bra016899.1-P	Field mustard	cytosol	79.78	81.56
CDY14807	Canola	cytosol	81.42	81.42
Bra000248.1-P	Field mustard	cytosol	80.87	81.32
Bra004665.1-P	Field mustard	cytosol	81.42	81.2
CDY35391	Canola	cytosol	80.6	81.04
CDY22548	Canola	cytosol	80.6	81.04
KRH38074	Soybean	cytosol	80.33	80.33
GSMUA_Achr3P02070_001	Banana	cytosol	76.23	77.5
GSMUA_Achr7P11370_001	Banana	cytosol	72.13	75.64
HORVU1Hr1G094240.1	Barley	cytosol	74.04	74.45
TraesCS1D01G444300.1	Wheat	cytosol	74.04	74.45
Os02t0565500-01	Rice	plasma membrane	73.5	74.1
Zm00001d016879_P001	Maize	plasma membrane	73.22	73.83
EES07005	Sorghum	cytosol	72.95	73.35
TraesCS1A01G435300.1	Wheat	cytosol	72.95	73.35
TraesCS4B01G052100.1	Wheat	cytosol	68.31	70.22
TraesCS4A01G262800.1	Wheat	cytosol	68.31	70.22
Zm00001d050833_P002	Maize	cytosol, plasma membrane, plastid	72.68	70.18
Os03t0226300-01	Rice	cytosol	69.67	70.05
KXG37697	Sorghum	cytosol	68.85	69.23
TraesCS1B01G471100.1	Wheat	cytosol	74.04	69.13
Zm00001d013400_P001	Maize	cytosol	66.94	68.25
EER92592	Sorghum	cytosol	67.49	68.23
Os03t0719850-00	Rice	mitochondrion, plasma membrane	67.76	67.95
PGSC0003DMT400069958	Potato	cytosol	65.3	66.39
HORVU4Hr1G008590.1	Barley	mitochondrion, plasma membrane, vacuole	69.13	65.71
PGSC0003DMT400034411	Potato	cytosol	24.86	64.54
PGSC0003DMT400044212	Potato	plasma membrane	59.56	60.39
PGSC0003DMT400011695	Potato	cytosol	66.12	60.05
PGSC0003DMT400011940	Potato	cytosol	63.93	58.79

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:102599605	MapMan:18.4.1.38.1	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0004713	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464
GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740
GO:GO:0018108	GO:GO:0019538	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	UniProt:M1C6Q8	PFAM:PF07714
EnsemblPlantsGene:PGSC0003DMG400023704	PGSC:PGSC0003DMG400023704	EnsemblPlants:PGSC0003DMT400060941	PIRSF:PIRSF000654	ScanProsite:PS00107	ScanProsite:PS00109
PFscan:PS50011	PANTHER:PTHR27001	PANTHER:PTHR27001:SF202	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00219
SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Tyr_kinase_AS	InterPro:Tyr_kinase_cat_dom	UniParc:UPI0002953EAC	RefSeq:XP_006351354.1
SEG:seg	:	:	:	:	:

Description

Protein kinase 1 [Source:PGSC_GENE;Acc:PGSC0003DMG400023704]

Coordinates

chr10:-:57404196..57407235

Molecular Weight (calculated)

39610.3 Da

IEP (calculated)

7.926

GRAVY (calculated)

-0.312

Length

366 amino acids

Sequence
(BLAST)

001: MSCCGGGEED VYSGGPPSNQ NTAPPRAGNP YAGGVSDRAE PRGGTRNGTP QKVLPIEIPV LPLDELNKLT GNFGQKALIG EGSYGRVFFA KLSNGQEAAI
101: KKLDTSSSPE PDSDFTAQLS MVSRLKHEHF VTLMGYCLEA NNRILIYEFA AMGSLHDVLH GRKGVQGAEP GPVLTWNQRV KVAFGAAKGL EYLHEKIQPP
201: IVHRDVRSSN VLLFDDFTAK VADFNLTNQT SDTAARLHST RVLGTFGYHA PEYAMTGQIT QKSDVYSFGV VLLELLTGRK PVDHTMPKGQ QSLVTWATPR
301: LSEDKVKQCV DPKLNNDYPA KAIAKMAAVA ALCVQYEADF RPNMTIVVKA LQPLLTAKPA GPESNT

Best Arabidopsis Sequence Match ( AT2G41970.1 )
(BLAST)

001: MFCCGGADEE PAGPPANQYA APPNKAGNPN FGGGNRGEPR NPNAPRSGAP AKVLPIEIPS VALDELNRMA GNFGNKALIG EGSYGRVFCG KFKGEAVAIK
101: KLDASSSEEP DSDFTSQLSV VSRLKHDHFV ELLGYCLEAN NRILIYQFAT KGSLHDVLHG RKGVQGAEPG PVLNWNQRVK IAYGAAKGLE FLHEKVQPPI
201: VHRDVRSSNV LLFDDFVAKM ADFNLTNASS DTAARLHSTR VLGTFGYHAP EYAMTGQITQ KSDVYSFGVV LLELLTGRKP VDHTMPKGQQ SLVTWATPRL
301: SEDKVKQCID PKLNNDFPPK AVAKLAAVAA LCVQYEADFR PNMTIVVKAL QPLLNSKPAG PESTS

Arabidopsis Description

Probable protein kinase At2g41970 [Source:UniProtKB/Swiss-Prot;Acc:P93749]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.