Factsheet for PGSC0003DMT400044212

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 2
extracellular 3
endoplasmic reticulum 3
vacuole 3
plasma membrane 5
golgi 3
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	plastid
iPSORT:	secretory
MultiLoc:	plasma membrane
Plant-mPloc:	nucleus
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc09g090210.2.1	Tomato	plasma membrane	92.24	93.02
PGSC0003DMT400067689	Potato	cytosol	62.05	60.7
PGSC0003DMT400060941	Potato	cytosol	60.39	59.56
PGSC0003DMT400029698	Potato	cytosol	60.66	59.35
VIT_08s0007g06750.t01	Wine grape	cytosol	58.73	58.24
GSMUA_Achr3P02070_001	Banana	cytosol	57.06	57.22
CDX79897	Canola	cytosol	57.06	56.13
CDY64576	Canola	cytosol	57.06	56.13
PGSC0003DMT400034411	Potato	cytosol	21.88	56.03
KRH67091	Soybean	cytosol	56.79	56.01
AT2G41970.1	Thale cress	cytosol	56.51	55.89
KRG95420	Soybean	cytosol	56.51	55.89
GSMUA_Achr7P11370_001	Banana	cytosol	54.02	55.87
Bra004665.1-P	Field mustard	cytosol	56.79	55.86
CDY14807	Canola	cytosol	56.51	55.74
CDY35391	Canola	cytosol	55.96	55.49
CDY22548	Canola	cytosol	55.96	55.49
Bra000248.1-P	Field mustard	cytosol	55.96	55.49
CDY06890	Canola	cytosol	56.23	55.46
Bra016899.1-P	Field mustard	cytosol	54.57	55.03
KRH38074	Soybean	cytosol	55.68	54.92
HORVU1Hr1G094240.1	Barley	cytosol	54.57	54.12
TraesCS1D01G444300.1	Wheat	cytosol	54.57	54.12
TraesCS1A01G435300.1	Wheat	cytosol	54.57	54.12
EES07005	Sorghum	cytosol	54.02	53.57
Os02t0565500-01	Rice	plasma membrane	53.74	53.44
Zm00001d016879_P001	Maize	plasma membrane	53.74	53.44
TraesCS4A01G262800.1	Wheat	cytosol	50.97	51.69
KXG37697	Sorghum	cytosol	52.08	51.65
TraesCS4B01G052100.1	Wheat	cytosol	50.69	51.4
Zm00001d013400_P001	Maize	cytosol	50.97	51.25
Zm00001d050833_P002	Maize	cytosol, plasma membrane, plastid	53.74	51.19
PGSC0003DMT400069958	Potato	cytosol	50.97	51.11
Os03t0719850-00	Rice	mitochondrion, plasma membrane	51.52	50.96
EER92592	Sorghum	cytosol	50.69	50.55
Os03t0226300-01	Rice	cytosol	50.97	50.55
TraesCS1B01G471100.1	Wheat	cytosol	54.85	50.51
PGSC0003DMT400011695	Potato	cytosol	54.29	48.64
HORVU4Hr1G008590.1	Barley	mitochondrion, plasma membrane, vacuole	51.25	48.05
PGSC0003DMT400011940	Potato	cytosol	50.69	45.98

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:102585511	MapMan:18.4.1.38.1	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0004713	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020
GO:GO:0016021	GO:GO:0016301	GO:GO:0016740	GO:GO:0018108	GO:GO:0019538	InterPro:IPR000719
InterPro:Kinase-like_dom_sf	UniProt:M1BFT4	PFAM:PF07714	EnsemblPlantsGene:PGSC0003DMG400017167	PGSC:PGSC0003DMG400017167	EnsemblPlants:PGSC0003DMT400044212
PIRSF:PIRSF000654	ScanProsite:PS00109	PFscan:PS50011	PANTHER:PTHR27001	PANTHER:PTHR27001:SF202	InterPro:Prot_kinase_dom
SMART:SM00219	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	TMHMM:TMhelix	InterPro:Tyr_kinase_AS	InterPro:Tyr_kinase_cat_dom
UniParc:UPI000296E32A	RefSeq:XP_006354476.1	SEG:seg	:	:	:

Description

Protein kinase 1 [Source:PGSC_GENE;Acc:PGSC0003DMG400017167]

Coordinates

chr9:-:56539361..56542313

Molecular Weight (calculated)

39753.1 Da

IEP (calculated)

4.725

GRAVY (calculated)

-0.182

Length

361 amino acids

Sequence
(BLAST)

001: MSSSSESNLV NYGFLIISAI LSIIFISSIK SIINVIKDRL HHSHNQANKE GESNESPPQE VVPIDVRADM SLDEINILTD NFAEKGLIAE GSYGRVYGAT
101: LSNGQQVAIK QLDTDSSSES DPVFADQVQM VSGLKHEHFV TLLGYCLEAN NRILVYESAT MGTLHDVLHG KKGVENAEPG LVLTWNQRVK IACGVASGLE
201: YLHKHDKPII HRDVRSSNVL LFDDFTAKVA DFDLTNQSSE DSTRVEESYG YHGPEYALGE KITDRSDVYS FAVVLLELLT GRKAVDYTMP EGKQSLVTWA
301: TPLLSDDKVQ ECVDPKLNNE YPPRAVAKVA ALVGLCIQEE PAFRPNMSIM VKALQPLLNA D

Best Arabidopsis Sequence Match ( AT2G30740.12 )
(BLAST)

001: MRRWICCGDK KGDSDLSNEE VHLKSPWQNS EANQKNQKPQ AVVKPEAQKE ALPIEVPPLS VDEVKEKTDN FGSKSLIGEG SYGRVYYATL NDGKAVALKK
101: LDVAPEAETN TEFLNQVSMV SRLKHENLIQ LVGYCVDENL RVLAYEFATM GSLHDILHGR KGVQGAQPGP TLDWLTRVKI AVEAARGLEY LHEKVQPPVI
201: HRDIRSSNVL LFEDYQAKVA DFNLSNQAPD NAARLHSTRV LGTFGYHAPE YAMTGQLTQK SDVYSFGVVL LELLTGRKPV DHTMPRGQQS LVTWATPRLS
301: EDKVKQCVDP KLKGEYPPKS VAKLAAVAAL CVQYESEFRP NMSIVVKALQ PLLKPPAPAP APVPES

Arabidopsis Description

PTI12PTI1-like tyrosine-protein kinase 2 [Source:UniProtKB/Swiss-Prot;Acc:O49339]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.