Factsheet for PGSC0003DMT400029698

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc10g078940.1.1	Tomato	cytosol, plastid	99.46	99.46
PGSC0003DMT400060941	Potato	cytosol	89.43	90.16
PGSC0003DMT400067689	Potato	cytosol	87.8	87.8
VIT_08s0007g06750.t01	Wine grape	cytosol	82.93	84.07
CDY64576	Canola	cytosol	82.11	82.56
AT2G41970.1	Thale cress	cytosol	81.57	82.47
CDX79897	Canola	cytosol	81.84	82.29
CDY06890	Canola	cytosol	81.57	82.24
Bra000248.1-P	Field mustard	cytosol	81.03	82.14
Bra016899.1-P	Field mustard	cytosol	79.67	82.12
Bra004665.1-P	Field mustard	cytosol	81.57	82.02
CDY14807	Canola	cytosol	81.3	81.97
KRH67091	Soybean	cytosol	81.3	81.97
CDY22548	Canola	cytosol	80.76	81.87
CDY35391	Canola	cytosol	80.76	81.87
KRG95420	Soybean	cytosol	80.76	81.64
KRH38074	Soybean	cytosol	79.13	79.78
GSMUA_Achr3P02070_001	Banana	cytosol	76.69	78.61
GSMUA_Achr7P11370_001	Banana	cytosol	73.44	77.65
HORVU1Hr1G094240.1	Barley	cytosol	73.98	75.0
Os02t0565500-01	Rice	plasma membrane	73.44	74.66
TraesCS1D01G444300.1	Wheat	cytosol	73.44	74.45
Zm00001d016879_P001	Maize	plasma membrane	73.17	74.38
EES07005	Sorghum	cytosol	72.9	73.9
TraesCS1A01G435300.1	Wheat	cytosol	72.63	73.63
Zm00001d050833_P002	Maize	cytosol, plasma membrane, plastid	73.17	71.24
TraesCS4A01G262800.1	Wheat	cytosol	68.56	71.07
TraesCS4B01G052100.1	Wheat	cytosol	68.56	71.07
KXG37697	Sorghum	cytosol	69.11	70.05
TraesCS1B01G471100.1	Wheat	cytosol	73.98	69.64
Os03t0226300-01	Rice	cytosol	68.56	69.51
Os03t0719850-00	Rice	mitochondrion, plasma membrane	68.56	69.32
Zm00001d013400_P001	Maize	cytosol	66.67	68.52
EER92592	Sorghum	cytosol	66.94	68.23
HORVU4Hr1G008590.1	Barley	mitochondrion, plasma membrane, vacuole	69.38	66.49
PGSC0003DMT400069958	Potato	cytosol	63.69	65.28
PGSC0003DMT400034411	Potato	cytosol	24.39	63.83
PGSC0003DMT400044212	Potato	plasma membrane	59.35	60.66
PGSC0003DMT400011695	Potato	cytosol	65.31	59.8
PGSC0003DMT400011940	Potato	cytosol	63.14	58.54

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:102598911	MapMan:18.4.1.38.1	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0004713	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464
GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740
GO:GO:0018108	GO:GO:0019538	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	UniProt:M1ATA4	PFAM:PF07714
EnsemblPlantsGene:PGSC0003DMG400011422	PGSC:PGSC0003DMG400011422	EnsemblPlants:PGSC0003DMT400029698	PIRSF:PIRSF000654	ScanProsite:PS00107	PFscan:PS50011
PANTHER:PTHR27001	PANTHER:PTHR27001:SF202	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00219	SUPFAM:SSF56112
InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Tyr_kinase_cat_dom	UniParc:UPI000296DBEA	RefSeq:XP_006362209.1	SEG:seg	:

Description

Protein kinase 2 [Source:PGSC_GENE;Acc:PGSC0003DMG400011422]

Coordinates

chr10:-:58819537..58822541

Molecular Weight (calculated)

39647.1 Da

IEP (calculated)

8.122

GRAVY (calculated)

-0.344

Length

369 amino acids

Sequence
(BLAST)

001: MSCCGGGEED VYSGGPPSNQ NTAPPRAGNP YGGGTGGASD RGEPRSAARG GTPQKVLPIE APVFTLDELN RLTGNFGQKA LVGEGSYGRV FCAKLSNGQQ
101: VAIKKLDTSA SPEPDSDFAA QLSMVSRLKN EHFMTLIGYC LEGNNRILVY EFATMGSLHD VLHGRKGVQG AEPGPVLTWN QRVKIAYGAA KGLEYLHEKI
201: QPPVVHRDVR SSNALLFDDF TAKVADFNIS NQSSDTAARL HSTRVLGTFG YHAPEYAMTG QITQKSDVYS FGVVLLELLT GRKPVDHTMP KGQQSLVTWA
301: TPRLSEDKVK QCVDPKLNND YPPKAIAKLA AVAALCVQYE ADFRPNMTIV VKALQPLLNS KPAGPESQA

Best Arabidopsis Sequence Match ( AT2G41970.1 )
(BLAST)

001: MFCCGGADEE PAGPPANQYA APPNKAGNPN FGGGNRGEPR NPNAPRSGAP AKVLPIEIPS VALDELNRMA GNFGNKALIG EGSYGRVFCG KFKGEAVAIK
101: KLDASSSEEP DSDFTSQLSV VSRLKHDHFV ELLGYCLEAN NRILIYQFAT KGSLHDVLHG RKGVQGAEPG PVLNWNQRVK IAYGAAKGLE FLHEKVQPPI
201: VHRDVRSSNV LLFDDFVAKM ADFNLTNASS DTAARLHSTR VLGTFGYHAP EYAMTGQITQ KSDVYSFGVV LLELLTGRKP VDHTMPKGQQ SLVTWATPRL
301: SEDKVKQCID PKLNNDFPPK AVAKLAAVAA LCVQYEADFR PNMTIVVKAL QPLLNSKPAG PESTS

Arabidopsis Description

Probable protein kinase At2g41970 [Source:UniProtKB/Swiss-Prot;Acc:P93749]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.