Factsheet for PGSC0003DMT400011940

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
nucleus 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc12g098980.1.1	Tomato	nucleus, plastid	87.94	98.87
PGSC0003DMT400069958	Potato	cytosol	82.66	91.39
VIT_05s0020g00720.t01	Wine grape	cytosol	75.63	83.61
Os05t0135800-01	Rice	plasma membrane	71.36	78.67
GSMUA_Achr11P...	Banana	cytosol, plasma membrane	71.36	78.45
Zm00001d010919_P001	Maize	cytosol, mitochondrion, plasma membrane	70.1	78.37
GSMUA_Achr8P10860_001	Banana	cytosol	71.11	78.18
TraesCS1D01G081400.3	Wheat	cytosol	70.35	77.35
EES17666	Sorghum	cytosol	70.1	77.07
Zm00001d008177_P001	Maize	cytosol, extracellular	69.1	77.03
KRH50647	Soybean	cytosol	69.35	76.67
KRH02454	Soybean	cytosol	68.84	76.11
OQU86753	Sorghum	cytosol	69.6	75.07
Zm00001d024755_P004	Maize	plasma membrane	71.11	73.13
TraesCS1A01G079700.1	Wheat	mitochondrion	70.35	72.92
TraesCS1B01G097700.1	Wheat	golgi	70.35	72.92
GSMUA_Achr3P01080_001	Banana	mitochondrion	62.81	68.87
PGSC0003DMT400034411	Potato	cytosol	23.62	66.67
PGSC0003DMT400060941	Potato	cytosol	58.79	63.93
PGSC0003DMT400067689	Potato	cytosol	58.79	63.41
PGSC0003DMT400029698	Potato	cytosol	58.54	63.14
PGSC0003DMT400011695	Potato	cytosol	61.56	60.79
GSMUA_Achr3P12800_001	Banana	cytosol, mitochondrion	51.26	58.29
PGSC0003DMT400044212	Potato	plasma membrane	45.98	50.69

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:102591802	MapMan:18.4.1.38.1	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464
GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740
GO:GO:0019538	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	UniProt:M1A0F1	PFAM:PF07714	EnsemblPlantsGene:PGSC0003DMG400004687
PGSC:PGSC0003DMG400004687	EnsemblPlants:PGSC0003DMT400011940	PIRSF:PIRSF000654	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011
PANTHER:PTHR27001	PANTHER:PTHR27001:SF177	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112
InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	UniParc:UPI000295B191	SEG:seg	:	:

Description

Pto-interacting protein 1 [Source:PGSC_GENE;Acc:PGSC0003DMG400004687]

Coordinates

chr12:-:59793658..59797500

Molecular Weight (calculated)

43239.7 Da

IEP (calculated)

8.361

GRAVY (calculated)

-0.230

Length

398 amino acids

Sequence
(BLAST)

001: MSCFSCCDDD DMHRAADNGP FMAHNSAGNN GGQHATESAQ RETQTVNIQP IAVPSIAVDE LKDITDNFGS KALIGEGSYG RVYHGVLKSG RAAAIKKLDS
101: SKQPDREFLA QVSMVSRLKD DNVVELLGYC VDGGFRVLAY EYAPNGSLHD ILHVNGPLTS GVNTASSQIL KLLSNAFSDM KNATTKRRKG VKGAQPGPVL
201: SWAQRVKIAV GAAKGLEYLH EKAQPHIIHR DIKSSNILLF DDDVAKIADF DLSNQAPDMA ARLHSTRVLG TFGYHAPEYA MTGQLSSKSD VYSFGVVLLE
301: LLTGRKPVDH TLPRGQQSLV TWATPRLSED KVKQCVDARL NTDYPPKAIA KLHFLTSAML KQMAAVAALC VQYEADFRPN MSIVVKALQP LLPRPVPS

Best Arabidopsis Sequence Match ( AT2G47060.4 )
(BLAST)

001: MSCFGCCGED DDMHKTADYG GRHNQAKHFP PGNDARHHQA SETAQKGPPV VKLQPIEVPI IPFSELKEAT DDFGSNSLIG EGSYGRVYYG VLNNDLPSAI
101: KKLDSNKQPD NEFLAQVSMV SRLKHDNFVQ LLGYCVDGNS RILSYEFANN GSLHDILHGR KGVKGAQPGP VLSWYQRVKI AVGAARGLEY LHEKANPHII
201: HRDIKSSNVL LFEDDVAKIA DFDLSNQAPD MAARLHSTRV LGTFGYHAPE YAMTGQLNAK SDVYSFGVVL LELLTGRKPV DHRLPRGQQS LVTWATPKLS
301: EDKVKQCVDA RLGGDYPPKA VAKVRNQTFH NLRLCLRFRL HSLFLTSSYG DDDSQLAAVA ALCVQYEADF RPNMSIVVKA LQPLLNARAV APGEGVH

Arabidopsis Description

Protein kinase superfamily protein [Source:TAIR;Acc:AT2G47060]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.