Factsheet for PGSC0003DMT400011695

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plasma membrane 1
cytosol 2
nucleus 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plasma membrane
EpiLoc:	plasma membrane
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc12g098820.1.1	Tomato	cytosol, nucleus	89.58	99.72
PGSC0003DMT400034411	Potato	cytosol	31.27	89.36
KRG93051	Soybean	endoplasmic reticulum, nucleus	77.92	85.79
KRH36313	Soybean	cytosol, mitochondrion	82.63	82.43
GSMUA_Achr8P32140_001	Banana	cytosol	65.76	78.4
CDX67793	Canola	cytosol	70.72	77.87
GSMUA_Achr3P21520_001	Banana	cytosol	70.97	77.51
GSMUA_AchrUn_...	Banana	cytosol	70.47	77.17
GSMUA_AchrUn_...	Banana	cytosol	70.97	76.68
Bra007444.1-P	Field mustard	cytosol	76.43	76.62
CDY06011	Canola	cytosol	76.43	76.43
Bra014542.1-P	Field mustard	cytosol	77.17	76.41
CDY57492	Canola	cytosol	75.68	76.25
CDX89020	Canola	cytosol	76.92	76.17
CDY00615	Canola	cytosol	76.92	76.17
GSMUA_Achr11P...	Banana	cytosol	68.98	75.14
CDX98366	Canola	cytosol	72.46	74.87
KXG36001	Sorghum	cytosol, mitochondrion	67.74	74.79
KXG25484	Sorghum	cytosol	66.75	74.52
CDY30389	Canola	cytosol	75.68	74.39
CDY23345	Canola	cytosol	75.68	74.39
Bra037729.1-P	Field mustard	cytosol	75.68	74.39
Bra003373.1-P	Field mustard	cytosol	75.19	74.26
Os01t0899000-01	Rice	plasma membrane	67.99	74.25
Os03t0844100-01	Rice	plasma membrane	67.74	74.18
Os09t0513600-01	Rice	plasma membrane	44.91	74.18
Zm00001d021136_P001	Maize	mitochondrion	67.0	74.18
CDX79833	Canola	cytosol	75.68	74.03
TraesCS5B01G296900.1	Wheat	cytosol	66.75	73.9
HORVU5Hr1G078180.3	Barley	cytosol	66.75	73.9
TraesCS5A01G297900.1	Wheat	cytosol	66.75	73.9
EER98423	Sorghum	cytosol	67.25	73.84
AT3G59350.6	Thale cress	plasma membrane	77.42	73.76
TraesCS7B01G164600.1	Wheat	cytosol	66.25	73.76
TraesCS4A01G341700.1	Wheat	cytosol	67.25	73.64
TraesCS5D01G531200.1	Wheat	cytosol	67.25	73.64
TraesCS5D01G304700.1	Wheat	cytosol	66.5	73.63
CDY17940	Canola	cytosol	74.94	73.48
TraesCS5B01G532900.1	Wheat	cytosol	66.5	73.42
TraesCS7D01G267300.1	Wheat	cytosol	65.76	73.41
TraesCS7A01G267400.1	Wheat	cytosol	65.76	73.41
OQU88043	Sorghum	cytosol	59.06	71.26
AT2G43230.2	Thale cress	cytosol	77.42	70.91
Zm00001d032997_P001	Maize	cytosol	8.93	70.59
Bra004752.1-P	Field mustard	cytosol, plasma membrane	74.69	70.49
HORVU3Hr1G089260.1	Barley	cytosol	64.52	70.46
TraesCS3B01G427900.1	Wheat	cytosol	64.52	70.46
TraesCS3D01G389800.1	Wheat	cytosol	64.02	70.3
PGSC0003DMT400069958	Potato	cytosol	61.54	68.89
Zm00001d042500_P001	Maize	cytosol, mitochondrion	67.49	66.34
PGSC0003DMT400067689	Potato	cytosol	60.55	66.12
PGSC0003DMT400060941	Potato	cytosol	60.05	66.12
PGSC0003DMT400029698	Potato	cytosol	59.8	65.31
KXG28636	Sorghum	cytosol	38.46	65.13
TraesCS3A01G395900.1	Wheat	plasma membrane	63.52	64.16
HORVU6Hr1G093170.3	Barley	cytosol	30.02	62.69
Zm00001d031689_P004	Maize	plasma membrane	66.0	61.72
PGSC0003DMT400011940	Potato	cytosol	60.79	61.56
Zm00001d005450_P003	Maize	cytosol	67.0	61.36
HORVU6Hr1G043760.1	Barley	cytosol, nucleus	11.66	61.04
Zm00001d019515_P008	Maize	cytosol, mitochondrion, plasma membrane	67.25	58.79
PGSC0003DMT400044212	Potato	plasma membrane	48.64	54.29
HORVU5Hr1G120520.6	Barley	plastid	69.73	52.62

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:102597422	MapMan:18.4.1.38.1	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0004713	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464
GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740
GO:GO:0018108	GO:GO:0019538	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	UniProt:M0ZZZ4	PFAM:PF07714
EnsemblPlantsGene:PGSC0003DMG400004594	PGSC:PGSC0003DMG400004594	EnsemblPlants:PGSC0003DMT400011695	PIRSF:PIRSF000654	ScanProsite:PS00107	ScanProsite:PS00109
PFscan:PS50011	PANTHER:PTHR27001	PANTHER:PTHR27001:SF115	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00219
SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Tyr_kinase_AS	InterPro:Tyr_kinase_cat_dom	UniParc:UPI000296B2BA	RefSeq:XP_006349879.1
SEG:seg	:	:	:	:	:

Description

Serine/threonine-protein kinase PBS1 [Source:PGSC_GENE;Acc:PGSC0003DMG400004594]

Coordinates

chr12:+:59627196..59635560

Molecular Weight (calculated)

44842.7 Da

IEP (calculated)

8.274

GRAVY (calculated)

-0.366

Length

403 amino acids

Sequence
(BLAST)

001: MAMDGNYHRQ GLVAHAPPPG YFSRLENRRA EDDLYLRKRV RMRRWLCCTC QVEESYPSHE TEHLKHPASH ADGYQKGSRV SDPIRAEADK AVPTIEVPAL
101: SFDELKQETD NFGSKALIGE GSYGRVYYAN LSNGKAVAVK KLDVSSEPET NVDFLNQVAR VSRLKHDNLV ELLGYCVEGN IRVLAYEFAT MGSLHDILHG
201: RKGVQGAQPG PTLEWVQRVR IAVDAARGLE YLHEKVQPSV IHRDIRSSNV LLFEDYKAKI ADFNLSNQAP DMAARLHSTR VLGTFGYHAP EYAMTGQLTQ
301: KSDVYSFGVV LLELLTGRKP VDHTMPRGQQ SLVTWATPRL SEDKVQQCVD PKLKGCPPKA VAKMAAVAAL CVQYEAEFRP NMSIVVKALQ PLLRAPAAPA
401: PEI

Best Arabidopsis Sequence Match ( AT3G59350.1 )
(BLAST)

001: MYPMDSDYHR RGLVANDRSP AQFVRLDKPR AVDDLYIGKR EKMRRWLCCA CHVEEPYHSS ENEHLRSPKH HNDFGHHTRK PQAAVKPDAL KEPPSIDVPA
101: LSLDELKEKT DNFGSKSLIG EGSYGRAYYA TLKDGKAVAV KKLDNAAEPE SNVEFLTQVS RVSKLKHDNF VELFGYCVEG NFRILAYEFA TMGSLHDILH
201: GRKGVQGAQP GPTLDWIQRV RIAVDAARGL EYLHEKVQPA VIHRDIRSSN VLLFEDFKAK IADFNLSNQS PDMAARLHST RVLGTFGYHA PEYAMTGQLT
301: QKSDVYSFGV VLLELLTGRK PVDHTMPRGQ QSLVTWATPR LSEDKVKQCV DPKLKGEYPP KAVAKLAAVA ALCVQYESEF RPNMSIVVKA LQPLLRSSTA
401: AAVPVQEA

Arabidopsis Description

Protein kinase superfamily protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LM53]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.