Factsheet for PGSC0003DMT400069958

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
plasma membrane 1
cytosol 3
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc05g053230.2.1	Tomato	nucleus	99.44	99.44
VIT_05s0020g00720.t01	Wine grape	cytosol	84.17	84.17
PGSC0003DMT400011940	Potato	cytosol	91.39	82.66
Os05t0135800-01	Rice	plasma membrane	80.28	80.06
Zm00001d010919_P001	Maize	cytosol, mitochondrion, plasma membrane	78.61	79.49
GSMUA_Achr8P10860_001	Banana	cytosol	78.89	78.45
GSMUA_Achr11P...	Banana	cytosol, plasma membrane	78.61	78.18
EES17666	Sorghum	cytosol	78.61	78.18
TraesCS1D01G081400.3	Wheat	cytosol	78.06	77.62
Zm00001d008177_P001	Maize	cytosol, extracellular	76.67	77.31
KRH50647	Soybean	cytosol	76.11	76.11
OQU86753	Sorghum	cytosol	76.94	75.07
KRH02454	Soybean	cytosol	75.0	75.0
TraesCS1A01G079700.1	Wheat	mitochondrion	78.33	73.44
TraesCS1B01G097700.1	Wheat	golgi	78.06	73.18
Zm00001d024755_P004	Maize	plasma membrane	78.61	73.13
GSMUA_Achr3P01080_001	Banana	mitochondrion	69.17	68.59
PGSC0003DMT400034411	Potato	cytosol	26.39	67.38
PGSC0003DMT400060941	Potato	cytosol	66.39	65.3
PGSC0003DMT400067689	Potato	cytosol	65.83	64.23
PGSC0003DMT400029698	Potato	cytosol	65.28	63.69
PGSC0003DMT400011695	Potato	cytosol	68.89	61.54
GSMUA_Achr3P12800_001	Banana	cytosol, mitochondrion	56.39	58.0
PGSC0003DMT400044212	Potato	plasma membrane	51.11	50.97

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:102603202	MapMan:18.4.1.38.1	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464
GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740
GO:GO:0019538	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	UniProt:M1CLH2	PFAM:PF07714	EnsemblPlantsGene:PGSC0003DMG400027204
PGSC:PGSC0003DMG400027204	EnsemblPlants:PGSC0003DMT400069958	PIRSF:PIRSF000654	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011
PANTHER:PTHR27001	PANTHER:PTHR27001:SF177	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112
InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	UniParc:UPI000296F14F	RefSeq:XP_006355716.1	RefSeq:XP_006355717.1	RefSeq:XP_015167966.1
RefSeq:XP_015167967.1	RefSeq:XP_015167968.1	SEG:seg	:	:	:

Description

Pto-interacting protein 1 [Source:PGSC_GENE;Acc:PGSC0003DMG400027204]

Coordinates

chr5:-:48506310..48512112

Molecular Weight (calculated)

39131.8 Da

IEP (calculated)

7.676

GRAVY (calculated)

-0.263

Length

360 amino acids

Sequence
(BLAST)

001: MSCFGCCDDD DMHKPADHGP FMTNNAAGYN AGQRATESAQ REMQNVNILP IAVPSITVDE LKDITDNFGT KALIGEGSYG RVYHGVLKSG RAAAIKKLDS
101: SKQPDREFSA QVSMVSRLKH ENVVELLGYS VDGGLRVLAY EYAPNGSLHD ILHGRKGVKG AQPGPVLSWA QRVKIAVGAA KGLEYLHEKA QPHIIHRDIK
201: SSNVLLFDDD VAKIADFDLS NQAPDMAARL HSTRVLGTFG YHAPEYAMTG QLSSKSDVYS FGVVLLELLT GRKPVDHTLP RGQQSLVTWA TPRLSEDKVK
301: QCVDARLGTD YPPKAIAKMA AVAALCVQYE ADFRPNMSIV VKALQPLLHA RPAPSETSNL

Best Arabidopsis Sequence Match ( AT3G62220.3 )
(BLAST)

001: MSCFGCCRED DLPGANDYGG HNMTKQSGGN DGRRNGSETA QKGAQSVKVQ PIEVAAILAD ELIEATNDFG TNSLIGEGSY ARVYHGVLKN GQRAAIKKLD
101: SNKQPNEEFL AQVSMVSRLK HVNFVELLGY SVDGNSRILV FEFAQNGSLH DILHGRKGVK GAKPGPLLSW HQRVKIAVGA ARGLEYLHEK ANPHVIHRDI
201: KSSNVLIFDN DVAKIADFDL SNQAPDMAAR LHSTRVLGTF GYHAPEYAMT GQLSAKSDVY SFGVVLLELL TGRKPVDHTL PRGQQSLVTW ATPKLSEDKV
301: KQCVDSRLGG DYPPKAVAKL AAVAALCVQY EADFRPNMSI VVKALQPLLN ARTGPAGEGA P

Arabidopsis Description

At3g62220 [Source:UniProtKB/TrEMBL;Acc:Q9M1Q2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.