Factsheet for Zm00001d024755_P004

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

cytosol 2
mitochondrion 1
endoplasmic reticulum 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	endoplasmic reticulum
YLoc:	cytosol

plasma membrane: 23353019

msms PMID: 23353019 doi

D Hopff, S Wienkoop, S Lüthje

University of Hamburg, Biocenter Klein Flottbek and Botanical Garden, Plant Physiology, Ohnhorststraße 18, D-22609 Hamburg, Germany.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES17666	Sorghum	cytosol	92.25	98.62
Zm00001d010919_P001	Maize	cytosol, mitochondrion, plasma membrane	90.44	98.31
Os05t0135800-01	Rice	plasma membrane	87.86	94.18
TraesCS1D01G081400.3	Wheat	cytosol	86.05	91.99
Zm00001d008177_P001	Maize	cytosol, extracellular	81.4	88.24
TraesCS1B01G097700.1	Wheat	golgi	86.05	86.72
TraesCS1A01G079700.1	Wheat	mitochondrion	86.05	86.72
GSMUA_Achr8P10860_001	Banana	cytosol	79.07	84.53
GSMUA_Achr11P...	Banana	cytosol, plasma membrane	78.29	83.7
Solyc12g098980.1.1	Tomato	nucleus, plastid	72.87	79.66
VIT_07s0005g02270.t01	Wine grape	cytosol	73.9	79.01
PGSC0003DMT400069958	Potato	cytosol	73.13	78.61
Solyc05g053230.2.1	Tomato	nucleus	73.13	78.61
VIT_05s0020g00720.t01	Wine grape	cytosol	72.61	78.06
KRG96588	Soybean	cytosol	72.61	77.84
KRH31739	Soybean	cytosol, endoplasmic reticulum, mitochondrion	72.61	77.84
KRH69158	Soybean	endoplasmic reticulum	72.35	77.56
KRH68320	Soybean	cytosol, endoplasmic reticulum, nucleus	72.09	77.29
CDX80077	Canola	cytosol	71.83	76.58
Bra004479.1-P	Field mustard	cytosol	71.83	76.58
CDY37782	Canola	cytosol	71.83	76.58
AT3G62220.3	Thale cress	cytosol	71.32	76.45
AT2G47060.4	Thale cress	cytosol	74.16	72.29
PGSC0003DMT400011940	Potato	cytosol	73.13	71.11
KRH50647	Soybean	cytosol	65.63	70.56
KRH02454	Soybean	cytosol	65.37	70.28
Zm00001d040695_P001	Maize	plasma membrane	67.7	70.05
Zm00001d032997_P001	Maize	cytosol	8.79	66.67
Zm00001d016879_P001	Maize	plasma membrane	59.95	63.91
Zm00001d021136_P001	Maize	mitochondrion	59.95	63.74
Zm00001d013400_P001	Maize	cytosol	58.91	63.51
Zm00001d050833_P002	Maize	cytosol, plasma membrane, plastid	60.47	61.74
Zm00001d042500_P001	Maize	cytosol, mitochondrion	61.5	58.05
Zm00001d031689_P004	Maize	plasma membrane	62.27	55.92
Zm00001d005450_P003	Maize	cytosol	63.05	55.45
Zm00001d019515_P008	Maize	cytosol, mitochondrion, plasma membrane	63.05	52.93
Zm00001d003212_P001	Maize	cytosol	43.93	45.45

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100037783	MapMan:18.4.1.38.1	Gene3D:3.30.200.20	ProteinID:AQK41973.1	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524
GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301
GO:GO:0016310	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	UniProt:K7U163	InterPro:Kinase-like_dom_sf
PFAM:PF07714	PIRSF:PIRSF000654	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27001
PANTHER:PTHR27001:SF177	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom
InterPro:Ser/Thr_kinase_AS	UniParc:UPI000221423D	EnsemblPlantsGene:Zm00001d024755	EnsemblPlants:Zm00001d024755_P004	EnsemblPlants:Zm00001d024755_T004	SEG:seg

Description

PTI1-like tyrosine-protein kinase 3

Coordinates

chr10:+:86464930..86468874

Molecular Weight (calculated)

42202.7 Da

IEP (calculated)

7.395

GRAVY (calculated)

-0.183

Length

387 amino acids

Sequence
(BLAST)

001: MSCFACCGDE DTQVPDTRAQ YPGHHPARAD AYRPSDQPPK GPQPVKMQPI AVPAIPVDEI REVTKGFGDE ALIGEGSFGR VYLGVLRNGR SAAVKKLDSN
101: KQPDQEFLAQ VSMVSRLKHE NVVELLGYCA DGTLRVLAYE FATMGSLHDM LHGRKGVKGA QPGPVLSWSQ RVKIAVGAAK GLEYLHEKAQ PHIIHRDIKS
201: SNVLLFDDDV AKIADFDLSN QAPDMAARLH STRVLGTFGY HAPEYAMTGQ LSSKSDVYSF GVVLLELLTG RKPVDHTLPR GQQSLVTWAT PRLSEDKVRQ
301: CVDSRLGGDY PPKAVAKFLE LVCRLAIHPE VLTLLVLLSL EQFAAVAALC VQYEADFRPN MSIVVKALQP LLNAHARATN PGEHAGS

Best Arabidopsis Sequence Match ( AT2G47060.4 )
(BLAST)

001: MSCFGCCGED DDMHKTADYG GRHNQAKHFP PGNDARHHQA SETAQKGPPV VKLQPIEVPI IPFSELKEAT DDFGSNSLIG EGSYGRVYYG VLNNDLPSAI
101: KKLDSNKQPD NEFLAQVSMV SRLKHDNFVQ LLGYCVDGNS RILSYEFANN GSLHDILHGR KGVKGAQPGP VLSWYQRVKI AVGAARGLEY LHEKANPHII
201: HRDIKSSNVL LFEDDVAKIA DFDLSNQAPD MAARLHSTRV LGTFGYHAPE YAMTGQLNAK SDVYSFGVVL LELLTGRKPV DHRLPRGQQS LVTWATPKLS
301: EDKVKQCVDA RLGGDYPPKA VAKVRNQTFH NLRLCLRFRL HSLFLTSSYG DDDSQLAAVA ALCVQYEADF RPNMSIVVKA LQPLLNARAV APGEGVH

Arabidopsis Description

Protein kinase superfamily protein [Source:TAIR;Acc:AT2G47060]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.