Factsheet for VIT_07s0005g02270.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
plasma membrane 1
cytosol 3
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH31739	Soybean	cytosol, endoplasmic reticulum, mitochondrion	87.29	87.53
KRH69158	Soybean	endoplasmic reticulum	87.02	87.26
KRG96588	Soybean	cytosol	85.08	85.32
KRH68320	Soybean	cytosol, endoplasmic reticulum, nucleus	84.53	84.76
VIT_05s0020g00720.t01	Wine grape	cytosol	82.6	83.06
Bra004479.1-P	Field mustard	cytosol	82.87	82.64
CDX80077	Canola	cytosol	82.87	82.64
CDY37782	Canola	cytosol	82.87	82.64
AT3G62220.3	Thale cress	cytosol	80.66	80.89
Os05t0135800-01	Rice	plasma membrane	80.66	80.89
TraesCS1D01G081400.3	Wheat	cytosol	80.66	80.66
GSMUA_Achr8P10860_001	Banana	cytosol	80.11	80.11
Zm00001d010919_P001	Maize	cytosol, mitochondrion, plasma membrane	78.73	80.06
GSMUA_Achr11P...	Banana	cytosol, plasma membrane	79.83	79.83
EES17666	Sorghum	cytosol	79.01	79.01
Zm00001d008177_P001	Maize	cytosol, extracellular	77.62	78.71
OQU86753	Sorghum	cytosol	78.73	77.24
TraesCS1A01G079700.1	Wheat	mitochondrion	80.66	76.04
TraesCS1B01G097700.1	Wheat	golgi	80.66	76.04
AT2G47060.4	Thale cress	cytosol	82.04	74.81
Zm00001d024755_P004	Maize	plasma membrane	79.01	73.9
GSMUA_Achr3P01080_001	Banana	mitochondrion	68.51	68.32
VIT_08s0007g06750.t01	Wine grape	cytosol	66.85	66.48
VIT_05s0124g00360.t01	Wine grape	cytosol	69.34	62.59
GSMUA_Achr3P12800_001	Banana	cytosol, mitochondrion	57.46	59.43

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100265884	wikigene:100265884	MapMan:18.4.1.38.1	Gene3D:3.30.200.20	EMBL:AM425960
ProteinID:CAN82125	ProteinID:CAN82125.1	ProteinID:CBI37022	ProteinID:CBI37022.3	UniProt:D7U2Q6	EMBL:FN596502
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0004675
GO:GO:0004871	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886
GO:GO:0006464	GO:GO:0006468	GO:GO:0007154	GO:GO:0007165	GO:GO:0007166	GO:GO:0007178
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016301	GO:GO:0016740
GO:GO:0019538	GO:GO:0038023	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	EntrezGene:LOC100265884	wikigene:LOC100265884
PFAM:PF07714	PIRSF:PIRSF000654	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27001
PANTHER:PTHR27001:SF56	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom
InterPro:Ser/Thr_kinase_AS	TIGR:TC55339	UniParc:UPI00015CA72F	ArrayExpress:VIT_07s0005g02270	EnsemblPlantsGene:VIT_07s0005g02270	EnsemblPlants:VIT_07s0005g02270.t01
unigene:Vvi.12143	RefSeq:XP_002280340	RefSeq:XP_002280340.1	RefSeq:XP_010652309.1	RefSeq:XP_010652310.1	SEG:seg

Description

No Description!

Coordinates

chr7:+:4650904..4654154

Molecular Weight (calculated)

39122.7 Da

IEP (calculated)

6.901

GRAVY (calculated)

-0.254

Length

362 amino acids

Sequence
(BLAST)

001: MSCFGCCEDD DIHTAPESGN PFAAKNPAGN DGGYRHTDPA PKGTQAVKVQ PIAVPPIPFD ELKEITDNFG TSALIGEGSY GRVYYGLLKN GQAAAIKKLD
101: ASKQPDEEFL AQVSMVSRLK HDNFVELIGY CVDGGSRILA YEFASNGSLH DILHGRKGVK GAQPGPILSW AQRVKIAVGA ARGLDYLHEK ASPHIIHRDI
201: KSSNVLLFDD DVAKIADFDL SNQAPDMAAR LHSTRVLGTF GYHAPEYAMT GQLNAKSDVY SFGVVLLELL TGRKPVDHTL PRGQQSLVTW ATPKLSEDKV
301: RQCVDTRLGQ DYPPKAVAKM AAVAALCVQY EADFRPNMSI VVKALQPLLN ARPGPSGEVP NM

Best Arabidopsis Sequence Match ( AT3G62220.3 )
(BLAST)

001: MSCFGCCRED DLPGANDYGG HNMTKQSGGN DGRRNGSETA QKGAQSVKVQ PIEVAAILAD ELIEATNDFG TNSLIGEGSY ARVYHGVLKN GQRAAIKKLD
101: SNKQPNEEFL AQVSMVSRLK HVNFVELLGY SVDGNSRILV FEFAQNGSLH DILHGRKGVK GAKPGPLLSW HQRVKIAVGA ARGLEYLHEK ANPHVIHRDI
201: KSSNVLIFDN DVAKIADFDL SNQAPDMAAR LHSTRVLGTF GYHAPEYAMT GQLSAKSDVY SFGVVLLELL TGRKPVDHTL PRGQQSLVTW ATPKLSEDKV
301: KQCVDSRLGG DYPPKAVAKL AAVAALCVQY EADFRPNMSI VVKALQPLLN ARTGPAGEGA P

Arabidopsis Description

At3g62220 [Source:UniProtKB/TrEMBL;Acc:Q9M1Q2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.