Factsheet for VIT_05s0020g00720.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc12g098980.1.1	Tomato	nucleus, plastid	83.89	85.31
Solyc05g053230.2.1	Tomato	nucleus	84.44	84.44
PGSC0003DMT400069958	Potato	cytosol	84.17	84.17
VIT_07s0005g02270.t01	Wine grape	cytosol	83.06	82.6
GSMUA_Achr11P...	Banana	cytosol, plasma membrane	80.28	79.83
GSMUA_Achr8P10860_001	Banana	cytosol	80.0	79.56
Zm00001d010919_P001	Maize	cytosol, mitochondrion, plasma membrane	77.78	78.65
Os05t0135800-01	Rice	plasma membrane	78.61	78.39
EES17666	Sorghum	cytosol	78.06	77.62
TraesCS1D01G081400.3	Wheat	cytosol	77.22	76.8
Zm00001d008177_P001	Maize	cytosol, extracellular	75.56	76.19
PGSC0003DMT400011940	Potato	cytosol	83.61	75.63
OQU86753	Sorghum	cytosol	76.39	74.53
KRH50647	Soybean	cytosol	74.44	74.44
KRH02454	Soybean	cytosol	74.17	74.17
TraesCS1A01G079700.1	Wheat	mitochondrion	77.5	72.66
Zm00001d024755_P004	Maize	plasma membrane	78.06	72.61
TraesCS1B01G097700.1	Wheat	golgi	77.22	72.4
GSMUA_Achr3P01080_001	Banana	mitochondrion	69.44	68.87
VIT_08s0007g06750.t01	Wine grape	cytosol	65.28	64.56
VIT_05s0124g00360.t01	Wine grape	cytosol	68.89	61.85
GSMUA_Achr3P12800_001	Banana	cytosol, mitochondrion	58.33	60.0

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100266523	wikigene:100266523	MapMan:18.4.1.38.1	Gene3D:3.30.200.20	EMBL:AM489192
ProteinID:CAN71112	ProteinID:CAN71112.1	ProteinID:CBI26005	ProteinID:CBI26005.3	UniProt:D7T684	EMBL:FN595749
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0004675
GO:GO:0004871	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886
GO:GO:0006464	GO:GO:0006468	GO:GO:0007154	GO:GO:0007165	GO:GO:0007166	GO:GO:0007178
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016301	GO:GO:0016740
GO:GO:0019538	GO:GO:0038023	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	EntrezGene:LOC100266523	wikigene:LOC100266523
PFAM:PF07714	PIRSF:PIRSF000654	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27001
PANTHER:PTHR27001:SF177	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom
InterPro:Ser/Thr_kinase_AS	TIGR:TC56500	UniParc:UPI00015C7786	ArrayExpress:VIT_05s0020g00720	EnsemblPlantsGene:VIT_05s0020g00720	EnsemblPlants:VIT_05s0020g00720.t01
unigene:Vvi.25093	RefSeq:XP_002267003	RefSeq:XP_002267003.1	RefSeq:XP_019075611.1	SEG:seg	:

Description

No Description!

Coordinates

chr5:+:2587437..2591207

Molecular Weight (calculated)

38970.3 Da

IEP (calculated)

6.995

GRAVY (calculated)

-0.247

Length

360 amino acids

Sequence
(BLAST)

001: MSCFSCCEED DIHKASDTGP YVANNSAVGH NGNYHMTEAS RSNDTQTVDV LPIAVSAISV DELKEITDNF GQQALIGEGS YGRVYHGLLK TGQAAAIKKL
101: DSSKQPDQEF LAQVSMVSRL KNENVVELVG YSVDGGLRVV AYEYASNGSL HDILHGRKGV KGAQPGPVLS WSQRVKIAVG AAKGLEYLHE KARPHIIHRD
201: IKSSNVLLFD DDVAKIADFD LSNQAPDSAA RLHSTRVLGT FGYHAPEYAM TGQLSSKSDV YSFGVVLLEL LTGRKPVDHT LPRGQQSLVT WATPKLSEDK
301: VKQCVDTRLG GEYPPKAVAK MAAVAALCVQ YEADFRPNMS IVVKALQPLL NARPGHTPTL

Best Arabidopsis Sequence Match ( AT3G62220.3 )
(BLAST)

001: MSCFGCCRED DLPGANDYGG HNMTKQSGGN DGRRNGSETA QKGAQSVKVQ PIEVAAILAD ELIEATNDFG TNSLIGEGSY ARVYHGVLKN GQRAAIKKLD
101: SNKQPNEEFL AQVSMVSRLK HVNFVELLGY SVDGNSRILV FEFAQNGSLH DILHGRKGVK GAKPGPLLSW HQRVKIAVGA ARGLEYLHEK ANPHVIHRDI
201: KSSNVLIFDN DVAKIADFDL SNQAPDMAAR LHSTRVLGTF GYHAPEYAMT GQLSAKSDVY SFGVVLLELL TGRKPVDHTL PRGQQSLVTW ATPKLSEDKV
301: KQCVDSRLGG DYPPKAVAKL AAVAALCVQY EADFRPNMSI VVKALQPLLN ARTGPAGEGA P

Arabidopsis Description

At3g62220 [Source:UniProtKB/TrEMBL;Acc:Q9M1Q2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.