Factsheet for Zm00001d016879_P001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

cytosol 2
mitochondrion 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytoskeleton
YLoc:	cytosol

plasma membrane: 23353019

msms PMID: 23353019 doi

D Hopff, S Wienkoop, S Lüthje

University of Hamburg, Biocenter Klein Flottbek and Botanical Garden, Plant Physiology, Ohnhorststraße 18, D-22609 Hamburg, Germany.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES07005	Sorghum	cytosol	97.25	96.98
Zm00001d050833_P002	Maize	cytosol, plasma membrane, plastid	96.69	92.61
Os02t0565500-01	Rice	plasma membrane	90.63	90.63
HORVU1Hr1G094240.1	Barley	cytosol	90.08	89.84
TraesCS1D01G444300.1	Wheat	cytosol	89.53	89.29
TraesCS1A01G435300.1	Wheat	cytosol	88.43	88.19
TraesCS1B01G471100.1	Wheat	cytosol	90.08	83.42
CDX79897	Canola	cytosol	74.38	73.57
CDY64576	Canola	cytosol	74.38	73.57
AT2G41970.1	Thale cress	cytosol	73.83	73.42
PGSC0003DMT400060941	Potato	cytosol	73.83	73.22
PGSC0003DMT400029698	Potato	cytosol	74.38	73.17
Solyc10g078940.1.1	Tomato	cytosol, plastid	74.38	73.17
KRG95420	Soybean	cytosol	73.55	73.15
Solyc10g080580.1.1	Tomato	cytosol	73.55	73.15
VIT_08s0007g06750.t01	Wine grape	cytosol	73.28	73.08
Bra004665.1-P	Field mustard	cytosol	73.83	73.02
KRH67091	Soybean	cytosol	73.0	72.4
PGSC0003DMT400067689	Potato	cytosol	73.55	72.36
Bra016899.1-P	Field mustard	cytosol	71.35	72.35
Bra000248.1-P	Field mustard	cytosol	72.45	72.25
CDY22548	Canola	cytosol	72.45	72.25
CDY35391	Canola	cytosol	72.45	72.25
CDY06890	Canola	cytosol	72.73	72.13
CDY14807	Canola	cytosol	72.73	72.13
Solyc03g059080.1.1	Tomato	cytosol	73.28	71.89
KRH38074	Soybean	cytosol	72.45	71.86
Zm00001d013400_P001	Maize	cytosol	66.12	66.85
Zm00001d010919_P001	Maize	cytosol, mitochondrion, plasma membrane	63.91	65.17
Zm00001d008177_P001	Maize	cytosol, extracellular	62.53	63.59
Zm00001d021136_P001	Maize	mitochondrion	63.64	63.46
Zm00001d024755_P004	Maize	plasma membrane	63.91	59.95
Zm00001d040695_P001	Maize	plasma membrane	60.61	58.82
Zm00001d032997_P001	Maize	cytosol	7.99	56.86
Zm00001d042500_P001	Maize	cytosol, mitochondrion	62.26	55.12
Solyc09g090210.2.1	Tomato	plasma membrane	53.72	54.47
PGSC0003DMT400044212	Potato	plasma membrane	53.44	53.74
Zm00001d031689_P004	Maize	plasma membrane	63.64	53.6
Zm00001d005450_P003	Maize	cytosol	63.36	52.27
Zm00001d019515_P008	Maize	cytosol, mitochondrion, plasma membrane	63.09	49.67
Zm00001d003212_P001	Maize	cytosol	46.01	44.65

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100272326	MapMan:18.4.1.38.1	Gene3D:3.30.200.20	ProteinID:AQK71875.1	UniProt:B4FN11
EMBL:BT038499	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004713
GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0018108	GO:GO:0019538	InterPro:IPR000719
InterPro:Kinase-like_dom_sf	PFAM:PF07714	PIRSF:PIRSF000654	ScanProsite:PS00107	ScanProsite:PS00109	PFscan:PS50011
PANTHER:PTHR27001	PANTHER:PTHR27001:SF163	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00219	SUPFAM:SSF56112
InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Tyr_kinase_AS	InterPro:Tyr_kinase_cat_dom	UniParc:UPI00017B6DE5	EnsemblPlantsGene:Zm00001d016879	EnsemblPlants:Zm00001d016879_P001
EnsemblPlants:Zm00001d016879_T001	SEG:seg	:	:	:	:

Description

Probable protein kinase

Coordinates

chr5:-:179261829..179264286

Molecular Weight (calculated)

38934.4 Da

IEP (calculated)

8.433

GRAVY (calculated)

-0.304

Length

363 amino acids

Sequence
(BLAST)

001: MSCCGGAEED SYGPPANQAV PPPNANAPGN RGGPRGPGAP RVGGPAKPIS IDAPSIPLDE LKKITNNFSE RALIGEGSYG RVYNATLGDG RAAVIKKLDT
101: SASQDSDTDF SAQIAMVSKL KNEYFLELLG YCLEDGNRMV AYQFATMGSL HNILHGKKGV QGAEPGPVLN WAQRVKIAYG AARGLEYLHE KVQPSIVHRD
201: IRSSNVLIFD DFSSKIADFN LTNQGTDTAA RLHSTRVLGT FGYHAPEYAM TGQINQKSDV YSFGVILLEL LTGRKPVDHT MPKGQQSLVT WATPRLSEDK
301: VKQCVDPKLN SDYPPKAVAK LAAVAALCVQ YESDFRPNMT IVVKAITPLL NAPKPAAPAA PQS

Best Arabidopsis Sequence Match ( AT2G41970.1 )
(BLAST)

001: MFCCGGADEE PAGPPANQYA APPNKAGNPN FGGGNRGEPR NPNAPRSGAP AKVLPIEIPS VALDELNRMA GNFGNKALIG EGSYGRVFCG KFKGEAVAIK
101: KLDASSSEEP DSDFTSQLSV VSRLKHDHFV ELLGYCLEAN NRILIYQFAT KGSLHDVLHG RKGVQGAEPG PVLNWNQRVK IAYGAAKGLE FLHEKVQPPI
201: VHRDVRSSNV LLFDDFVAKM ADFNLTNASS DTAARLHSTR VLGTFGYHAP EYAMTGQITQ KSDVYSFGVV LLELLTGRKP VDHTMPKGQQ SLVTWATPRL
301: SEDKVKQCID PKLNNDFPPK AVAKLAAVAA LCVQYEADFR PNMTIVVKAL QPLLNSKPAG PESTS

Arabidopsis Description

Probable protein kinase At2g41970 [Source:UniProtKB/Swiss-Prot;Acc:P93749]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.