Factsheet for Solyc10g078940.1.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

plastid: 22908117

msms PMID: 22908117 doi

C Barsan, M Zouine, E Maza, W Bian, I Egea, M Rossignol, D Bouyssie, C Pichereaux, E Purgatto, M Bouzayen, A Latché, JC Pech

Université de Toulouse, Institut National Polytechnique-Ecole Nationale Supérieure Agronomique de Toulouse, Génomique et Biotechnologie des Fruits, Castanet-Tolosan F-31326, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400029698	Potato	cytosol	99.46	99.46
Solyc10g080580.1.1	Tomato	cytosol	88.62	89.59
Solyc03g059080.1.1	Tomato	cytosol	85.09	84.86
VIT_08s0007g06750.t01	Wine grape	cytosol	82.93	84.07
CDY64576	Canola	cytosol	82.38	82.83
CDX79897	Canola	cytosol	82.11	82.56
CDY06890	Canola	cytosol	81.84	82.51
AT2G41970.1	Thale cress	cytosol	81.57	82.47
Bra000248.1-P	Field mustard	cytosol	81.3	82.42
Bra016899.1-P	Field mustard	cytosol	79.95	82.4
CDY14807	Canola	cytosol	81.57	82.24
CDY35391	Canola	cytosol	81.03	82.14
CDY22548	Canola	cytosol	81.03	82.14
Bra004665.1-P	Field mustard	cytosol	81.57	82.02
KRH67091	Soybean	cytosol	81.03	81.69
KRG95420	Soybean	cytosol	80.49	81.37
KRH38074	Soybean	cytosol	79.4	80.05
GSMUA_Achr3P02070_001	Banana	cytosol	76.69	78.61
GSMUA_Achr7P11370_001	Banana	cytosol	73.44	77.65
HORVU1Hr1G094240.1	Barley	cytosol	73.98	75.0
Os02t0565500-01	Rice	plasma membrane	73.44	74.66
TraesCS1D01G444300.1	Wheat	cytosol	73.44	74.45
Zm00001d016879_P001	Maize	plasma membrane	73.17	74.38
EES07005	Sorghum	cytosol	72.9	73.9
TraesCS1A01G435300.1	Wheat	cytosol	72.63	73.63
Zm00001d050833_P002	Maize	cytosol, plasma membrane, plastid	73.17	71.24
TraesCS4B01G052100.1	Wheat	cytosol	68.56	71.07
TraesCS4A01G262800.1	Wheat	cytosol	68.56	71.07
KXG37697	Sorghum	cytosol	69.11	70.05
TraesCS1B01G471100.1	Wheat	cytosol	74.25	69.9
Os03t0226300-01	Rice	cytosol	68.83	69.78
Os03t0719850-00	Rice	mitochondrion, plasma membrane	68.56	69.32
Zm00001d013400_P001	Maize	cytosol	66.67	68.52
EER92592	Sorghum	cytosol	67.21	68.51
Solyc12g098820.1.1	Tomato	cytosol, nucleus	65.58	66.85
Solyc12g098980.1.1	Tomato	nucleus, plastid	63.96	66.67
HORVU4Hr1G008590.1	Barley	mitochondrion, plasma membrane, vacuole	69.38	66.49
Solyc05g053230.2.1	Tomato	nucleus	63.69	65.28
Solyc09g090210.2.1	Tomato	plasma membrane	58.27	60.06
Solyc09g098570.1.1	Tomato	mitochondrion	14.91	41.67

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.38.1	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0004675	GO:GO:0004713	GO:GO:0004871	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006464	GO:GO:0006468	GO:GO:0007154
GO:GO:0007165	GO:GO:0007166	GO:GO:0007178	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016020	GO:GO:0016301	GO:GO:0016740	GO:GO:0018108	GO:GO:0019538	GO:GO:0038023
InterPro:IPR000719	UniProt:K4D2D5	InterPro:Kinase-like_dom_sf	PFAM:PF07714	PIRSF:PIRSF000654	ScanProsite:PS00107
PFscan:PS50011	PANTHER:PTHR27001	PANTHER:PTHR27001:SF202	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00219
SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	EnsemblPlantsGene:Solyc10g078940.1	EnsemblPlants:Solyc10g078940.1.1	InterPro:Tyr_kinase_cat_dom	UniParc:UPI000276A575
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr10:+:60584018..60586415

Molecular Weight (calculated)

39635.1 Da

IEP (calculated)

8.122

GRAVY (calculated)

-0.344

Length

369 amino acids

Sequence
(BLAST)

001: MSCCGGGEED VYSGGPPSNQ NTAPPRAGNP YGGGAGGASD RGEPRSAARG GTPQKVLPIE APVFTLDELN RLTGNFGQKA LVGEGSYGRV FCAKLSNGQQ
101: VAIKKLDTSA SPEPDSDFAA QLSMVSRLKN EHFMTLMGYC LEGNNRILVY EFATMGSLHD VLHGRKGVQG AEPGPVLTWN QRVKIAYGAA KGLEYLHEKI
201: QPPVVHRDVR SSNALLFDDF TAKVADFNIS NQSSDTAARL HSTRVLGTFG YHAPEYAMTG QITQKSDVYS FGVVLLELLT GRKPVDHTMP KGQQSLVTWA
301: TPRLSEDKVK QCVDPKLNND YPPKAIAKLA AVAALCVQYE ADFRPNMTIV VKALQPLLNS KPAGPESQA

Best Arabidopsis Sequence Match ( AT2G41970.1 )
(BLAST)

001: MFCCGGADEE PAGPPANQYA APPNKAGNPN FGGGNRGEPR NPNAPRSGAP AKVLPIEIPS VALDELNRMA GNFGNKALIG EGSYGRVFCG KFKGEAVAIK
101: KLDASSSEEP DSDFTSQLSV VSRLKHDHFV ELLGYCLEAN NRILIYQFAT KGSLHDVLHG RKGVQGAEPG PVLNWNQRVK IAYGAAKGLE FLHEKVQPPI
201: VHRDVRSSNV LLFDDFVAKM ADFNLTNASS DTAARLHSTR VLGTFGYHAP EYAMTGQITQ KSDVYSFGVV LLELLTGRKP VDHTMPKGQQ SLVTWATPRL
301: SEDKVKQCID PKLNNDFPPK AVAKLAAVAA LCVQYEADFR PNMTIVVKAL QPLLNSKPAG PESTS

Arabidopsis Description

Probable protein kinase At2g41970 [Source:UniProtKB/Swiss-Prot;Acc:P93749]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.