Factsheet for TraesCS6A01G214800.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 3
cytosol 2
endoplasmic reticulum 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, endoplasmic reticulum, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	plastid
WoLF PSORT:	endoplasmic reticulum
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS1A01G435300.1
TraesCS1B01G471100.1
TraesCS1D01G444300.1
TraesCS4A01G106400.1
TraesCS4A01G262800.1
TraesCS4B01G052100.1
TraesCS4B01G197800.1
TraesCS4D01G198600.1
TraesCS7A01G111300.1
TraesCS7B01G009200.1
TraesCS7D01G106400.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G25250.1	TraesCS7A01G111300.1	AT2G43790.1	21276203
AT3G25250.1	TraesCS7B01G009200.1	AT2G43790.1	21276203
AT3G25250.1	TraesCS7D01G106400.1	AT2G43790.1	21276203
AT3G25250.1	TraesCS4A01G106400.1	AT3G45640.1	21276203
AT3G25250.1	TraesCS4B01G197800.1	AT3G45640.1	21276203
AT3G25250.1	TraesCS4D01G198600.1	AT3G45640.1	21276203
AT4G13000.1	TraesCS1A01G435300.1	AT2G41970.1	21798944
AT4G13000.1	TraesCS1B01G471100.1	AT2G41970.1	21798944
AT4G13000.1	TraesCS1D01G444300.1	AT2G41970.1	21798944
AT4G13000.1	TraesCS4A01G262800.1	AT2G41970.1	21798944
AT4G13000.1	TraesCS4B01G052100.1	AT2G41970.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G197300.1	Wheat	plastid	98.15	97.93
TraesCS6B01G244600.1	Wheat	plastid	96.07	95.19
HORVU6Hr1G054770.3	Barley	plastid	95.61	94.95
Os02t0603000-00	Rice	cytosol, endoplasmic reticulum, plastid	74.13	71.81
Zm00001d017135_P001	Maize	cytosol	72.29	71.62
EES07111	Sorghum	plastid	72.29	62.85
TraesCS2A01G347400.1	Wheat	cytosol	64.2	60.83
GSMUA_AchrUn_...	Banana	cytosol	46.65	56.74
AT4G13000.1	Thale cress	cytosol	42.49	49.46
CDY27899	Canola	cytosol	44.11	46.25
CDY00833	Canola	cytosol	43.65	46.21
Bra015120.1-P	Field mustard	cytosol	44.11	46.14
GSMUA_Achr9P07870_001	Banana	plastid	48.27	44.47
PGSC0003DMT400016996	Potato	cytosol, plastid	42.49	44.23
AT3G25250.1	Thale cress	cytosol	42.73	43.94
Solyc09g056430.2.1	Tomato	cytosol	40.18	43.94
KRH07383	Soybean	cytosol	42.49	42.4
KRH66186	Soybean	cytosol	42.49	42.2
KRH46605	Soybean	cytosol	41.8	40.67
TraesCS7A01G244900.1	Wheat	cytosol	36.26	36.51
TraesCS5A01G263600.1	Wheat	cytosol	36.95	36.45
TraesCS7A01G426500.1	Wheat	cytosol	9.93	32.09
TraesCS5A01G192800.1	Wheat	cytosol	9.7	31.11
TraesCS2A01G272400.1	Wheat	cytosol	28.64	13.92
TraesCS5A01G157000.1	Wheat	cytosol	28.64	13.48

Protein Annotations

Gene3D:1.10.510.10	Gene3D:3.30.200.20	MapMan:50.2.7	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719
InterPro:Kinase-like_dom_sf	PFAM:PF00069	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24351	PANTHER:PTHR24351:SF72
InterPro:Prot_kinase_dom	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	EnsemblPlantsGene:TraesCS6A01G214800	EnsemblPlants:TraesCS6A01G214800.1
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr6A:+:393637171..393638472

Molecular Weight (calculated)

46074.7 Da

IEP (calculated)

8.786

GRAVY (calculated)

-0.195

Length

433 amino acids

Sequence
(BLAST)

001: MVSTAPMPPP PQLSLADLRA MSVLGHGARG VVFHVVPVVA AAAGGGCSPD QPMALKAMSR AAARQKSAAG GPAPGGDGLR RIWFERDVLL AVRHPLLPSL
101: RGVVATEAVV GFAIDRCAGG DLNSLRRRQA GRAFSDAAIR FYAAELVLVL EHLHGLGVVY RDLKPDNVLI QGSGHIMLVD FDLSTSLPPP LPPPPPDTNS
201: PSPGSSLSSN SSRRCKRKNN KTLVFGHFSS RRAASPESSS SSSTTSRAAS PASSSSCCSS PGAGTTPAKS NSFVGTEYYV APEVVAGSGH DYAVDWWGLG
301: VVLYEMLYGR TPFRGRSRRE TFQRVLTAQP ELPGEPTPLR DLIARLLEKD SGKRLGANGV KRHAFFRGVC WDRVLDVARP PFIPMPYDDS ADSGAEAETL
401: DVEKVVHETF ALSATRTSEE KPDGGDSDFS IFF

Best Arabidopsis Sequence Match ( AT1G51170.1 )
(BLAST)

001: METRPSSSSS LSPATNLNLD RLKVLKLLGK GATGTVFLVH DSVSDSSVSS PFALKLVDKS SASSLRRARW EIQILRRLSD DTNPNPFLPK LLASSESSEF
101: IAWALPYCSG GDLNVLRQRQ NDGVFSSSVI KFYLAEIVCA LDHLHTMGIA YRDLKPENIL LQESGHVTLT DFDLSCSLNK PTRPEFYHLS DPEPDPNPES
201: NLSHNKKSLR IFRQKKKKTK SARVNPITRR RLSFSGGERS NSFVGTDEYI SPEVIRGDGH DFAVDWWALG VLTYEMMYGE TPFKGRNKKE TFRNVLVKEP
301: EFAGKPSDLT DLIRRLLVKD PTKRFGFWRG AAEIKEHAFF KGVRWELLTE VLRPPFIPLR DDGDLTGKVT EESGFGIKEY FEKLKTPPLP LPHECSENNP
401: FVDF

Arabidopsis Description

UNCSerine/threonine-protein kinase UCN [Source:UniProtKB/Swiss-Prot;Acc:Q9SYB9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.