CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
KRG89065
KRG95420
KRH24954
KRH38074
KRH50176
KRH67091
KRH71277

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G25250.1	KRH50176	AT2G43790.1	21276203
AT3G25250.1	KRH71277	AT2G43790.1	21276203
AT3G25250.1	KRG89065	AT3G45640.1	21276203
AT3G25250.1	KRH24954	AT3G45640.1	21276203
AT4G13000.1	KRG95420	AT2G41970.1	21798944
AT4G13000.1	KRH38074	AT2G41970.1	21798944
AT4G13000.1	KRH67091	AT2G41970.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH66186	Soybean	cytosol	58.43	59.63
KRH07383	Soybean	cytosol	57.75	59.22
AT4G13000.1	Thale cress	cytosol	46.29	55.38
GSMUA_AchrUn_...	Banana	cytosol	41.12	51.4
AT3G25250.1	Thale cress	cytosol	48.31	51.07
Solyc09g056430.2.1	Tomato	cytosol	44.94	50.51
Bra015120.1-P	Field mustard	cytosol	46.52	50.0
CDY27899	Canola	cytosol	46.29	49.88
CDY00833	Canola	cytosol	45.84	49.88
PGSC0003DMT400016996	Potato	cytosol, plastid	45.84	49.04
Zm00001d003228_P001	Maize	cytosol, plastid	44.94	43.96
EES11030	Sorghum	cytosol	44.72	43.17
TraesCS2B01G365900.1	Wheat	cytosol	44.04	43.08
TraesCS2A01G347400.1	Wheat	cytosol	44.04	42.89
Zm00001d025735_P001	Maize	cytosol	44.04	41.97
TraesCS6A01G214800.1	Wheat	cytosol	40.67	41.8
TraesCS6D01G197300.1	Wheat	plastid	40.45	41.47
Zm00001d017135_P001	Maize	cytosol	40.45	41.19
Zm00001d017533_P001	Maize	cytosol, endoplasmic reticulum, mitochondrion, vacuole	28.76	41.16
Os04t0488700-01	Rice	cytosol	42.7	41.13
TraesCS6B01G244600.1	Wheat	plastid	40.22	40.96
HORVU0Hr1G005020.4	Barley	cytosol, mitochondrion	38.43	40.91
HORVU6Hr1G054770.3	Barley	plastid	40.0	40.83
Os02t0603000-00	Rice	cytosol, endoplasmic reticulum, plastid	40.67	40.49
GSMUA_Achr9P07870_001	Banana	plastid	41.8	39.57
KRH23156	Soybean	cytosol	32.81	37.82
KRH24685	Soybean	cytosol	34.61	36.75
EES07111	Sorghum	plastid	41.12	36.75
KRH29689	Soybean	cytosol	33.71	36.5
KRH45318	Soybean	cytosol	13.93	34.44
KRH10351	Soybean	nucleus, plastid	30.34	14.03
KRH22966	Soybean	nucleus, plastid	30.34	13.75
KRH07591	Soybean	cytosol	30.11	13.54
KRH24973	Soybean	cytosol	29.66	13.51
KRH45326	Soybean	cytosol	15.96	8.7

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100813693	MapMan:18.4.6.5	Gene3D:3.30.200.20	EMBL:ACUP02005351	InterPro:AGC-kinase_C
EnsemblPlantsGene:GLYMA_08G345500	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674
GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0005737	GO:GO:0005886	GO:GO:0006464	GO:GO:0006468	GO:GO:0007154	GO:GO:0007165
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016301	GO:GO:0016310
GO:GO:0016740	GO:GO:0019538	GO:GO:0035556	UniProt:I1KZ05	InterPro:IPR000719	InterPro:IPR000961
EnsemblPlants:KRH46605	ProteinID:KRH46605	ProteinID:KRH46605.1	InterPro:Kinase-like_dom_sf	PFAM:PF00069	ScanProsite:PS00108
PFscan:PS50011	PFscan:PS51285	PANTHER:PTHR24351	PANTHER:PTHR24351:SF172	InterPro:Prot_kinase_dom	SMART:SM00220
SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0002339248	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr8:-:46044867..46046991

Molecular Weight (calculated)

50618.0 Da

IEP (calculated)

7.672

GRAVY (calculated)

-0.607

Length

445 amino acids

Sequence
(BLAST)

001: MYGGDSDNSD GGSDDLRRGD TLDFRNLKVV SAVGRGAKGV VFLARQYGAA AGGGEWVALK VVSKALLRKK NKNGYGGCKR VSFERHILRH LDHPLFPRFR
101: GAFETEQLTG FAIDYCHGGN LHSLRKKQPE KTFSEKSIRF YAVELVLALE YLHNFGVVYR DLKPENIMIQ ETGHIMLVDF DLSKKLKLKS NSSSCNSSPN
201: SDSSSEKEKR KRQISRFNCF CHTGMSLYDL DIPSQLDTIP TRQSLSDLLE KSNSFVGTED YVAPEVILGQ GHDFGVDWWS LGIVLYEMLY GATPFKGANR
301: KETFQRIITK EPYLMGETTP LKDLIIKLLE KDPNGRIEVD EIKSHDFFKG VKWDTVLEIA RPPYIPQNDH EIEDLIGFSK KDVESFVHGI FFPKNKREKD
401: KTNEGDKKGN TIESRKDEDN NHNNKNVWVD KLNQDSIKDD NFLVF

Best Arabidopsis Sequence Match ( AT3G25250.1 )
(BLAST)

001: MLEGDEKQSR ALDFNRLEVL SLLGRGAKGV VFLVRDDDAK LLALKVILKE AIEKKKKGRE SEDDEYKRVS FEQGVLSRFD HPLFPSLHGV LATDKVIGYA
101: IDYCPGQNLN SLRKMQSESM FSDEIIRFYA AELVLALDYL HNQGIVYRDL KPDNVMIQEN GHLMLIDFDL STNLAPRTPQ PSPSLSKPSP TMKRKKRLFR
201: FTSFCNSGIS PQESISVHSS STLAVSDSSG EKSNSFVGTE EYVAPEVISG DGHDFAVDWW SLGVVLYEML YGATPFRGSN RKETFYRILS KPPNLTGETT
301: SLRDLIRRLL EKDPSRRINV EEIKGHDFFR GVDWEKVILV SRPPYIPAPD DGGDKGTDVN TKMDVENIVQ EIFAARQERE KQSGDNNKNA NMKIKDNTSG
401: EWVKGLNNNH DLESDNNFLV F

Arabidopsis Description

OXI1Serine/threonine-protein kinase OXI1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LSF1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.