CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
plastid 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
EER89222
EER92592
EES07005
KXG37697
KXG39626

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G25250.1	EER89222	AT2G43790.1	21276203
AT3G25250.1	KXG39626	AT3G45640.1	21276203
AT4G13000.1	EER92592	AT2G41970.1	21798944
AT4G13000.1	EES07005	AT2G41970.1	21798944
AT4G13000.1	KXG37697	AT2G41970.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d003228_P001	Maize	cytosol, plastid	91.32	92.53
Zm00001d025735_P001	Maize	cytosol	89.37	88.22
TraesCS2B01G365900.1	Wheat	cytosol	76.79	77.8
TraesCS2A01G347400.1	Wheat	cytosol	76.57	77.24
Os04t0488700-01	Rice	cytosol	74.84	74.68
Zm00001d017533_P001	Maize	cytosol, endoplasmic reticulum, mitochondrion, vacuole	49.46	73.31
HORVU0Hr1G005020.4	Barley	cytosol, mitochondrion	63.12	69.62
GSMUA_AchrUn_...	Banana	cytosol	50.76	65.73
EES07111	Sorghum	plastid	61.39	56.83
AT4G13000.1	Thale cress	cytosol	43.38	53.76
GSMUA_Achr9P07870_001	Banana	plastid	53.36	52.34
CDY00833	Canola	cytosol	45.77	51.59
CDY27899	Canola	cytosol	46.2	51.57
Bra015120.1-P	Field mustard	cytosol	46.2	51.45
AT3G25250.1	Thale cress	cytosol	45.55	49.88
Solyc09g056430.2.1	Tomato	cytosol	42.73	49.75
PGSC0003DMT400016996	Potato	cytosol, plastid	44.47	49.28
KRH07383	Soybean	cytosol	44.9	47.7
KRH66186	Soybean	cytosol	43.17	45.64
KRH46605	Soybean	cytosol	43.17	44.72
EER99080	Sorghum	cytosol, nucleus, peroxisome	37.09	39.04
EES15407	Sorghum	cytosol	34.71	36.12
EES14872	Sorghum	cytosol	29.5	15.28
EES15492	Sorghum	cytosol	29.93	15.12

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.6.5	Gene3D:3.30.200.20	EntrezGene:8073694	InterPro:AGC-kinase_C	UniProt:C5YAY9
EnsemblPlants:EES11030	ProteinID:EES11030	ProteinID:EES11030.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0005737	GO:GO:0005886	GO:GO:0006464	GO:GO:0006468
GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020
GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0019538	GO:GO:0035556	InterPro:IPR000719
InterPro:IPR000961	InterPro:Kinase-like_dom_sf	PFAM:PF00069	ScanProsite:PS00108	PFscan:PS50011	PFscan:PS51285
PANTHER:PTHR24351	PANTHER:PTHR24351:SF69	InterPro:Prot_kinase_dom	SMART:SM00220	EnsemblPlantsGene:SORBI_3006G128200	SUPFAM:SSF56112
unigene:Sbi.5274	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0001A86FF8	RefSeq:XP_002446702.1	SEG:seg	:

Description

hypothetical protein

Coordinates

chr6:+:49328610..49330717

Molecular Weight (calculated)

48971.0 Da

IEP (calculated)

8.645

GRAVY (calculated)

-0.295

Length

461 amino acids

Sequence
(BLAST)

001: MTAVAAPPPP RQLSLEDLKA VSVLGRGAKG VVFHVVHAPG GEQDGEAGAA AMALKAVSRE AARHKKAAGG DGDGHRRIWF ERDVLLALRH PLLPSLRGIL
101: ATDAVVGFAI DRCGGGDLNS LRRRQTEKMF SDSVIRFYAA ELVLALEYLH SLGIVYRDLK PENVLIQDSG HIMLVDFDLS TRLPAPPQEP DAPATSPKPV
201: APVAAPLPSR GRARKPAGAA LCFPFRTGSA ARPAAKPAAD SPSPLSTSRT ASSSSSSSTA TTASSSAASP GARTPAKSNS FVGTEDYVAP EIIAGRGHDF
301: AVDWWGLGVV LYEMLYGRTP FRGQNRKETF YRVLAKQPEL VGEQTPLRDL IARLLEKDPE KRVGARGVKA HPFFRGVDWD RILQVARPPF IPTPSPQDEG
401: GDEALDVEKV VHEVFASNEA EAATKAGEGG KASPVADGGR VGGDGDGRRD QSKDGDFSVF F

Best Arabidopsis Sequence Match ( AT3G25250.1 )
(BLAST)

001: MLEGDEKQSR ALDFNRLEVL SLLGRGAKGV VFLVRDDDAK LLALKVILKE AIEKKKKGRE SEDDEYKRVS FEQGVLSRFD HPLFPSLHGV LATDKVIGYA
101: IDYCPGQNLN SLRKMQSESM FSDEIIRFYA AELVLALDYL HNQGIVYRDL KPDNVMIQEN GHLMLIDFDL STNLAPRTPQ PSPSLSKPSP TMKRKKRLFR
201: FTSFCNSGIS PQESISVHSS STLAVSDSSG EKSNSFVGTE EYVAPEVISG DGHDFAVDWW SLGVVLYEML YGATPFRGSN RKETFYRILS KPPNLTGETT
301: SLRDLIRRLL EKDPSRRINV EEIKGHDFFR GVDWEKVILV SRPPYIPAPD DGGDKGTDVN TKMDVENIVQ EIFAARQERE KQSGDNNKNA NMKIKDNTSG
401: EWVKGLNNNH DLESDNNFLV F

Arabidopsis Description

OXI1Serine/threonine-protein kinase OXI1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LSF1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.