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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 4
  • plastid 2
  • nucleus 1
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus, plastid
BaCelLo:cytosol
EpiLoc:plastid
iPSORT:plastid
MultiLoc:cytosol
Plant-mPloc:nucleus
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
EER91113
EER91871 nucleus
EER93093
EER94230
EES00109 nucleus, nucleus
EES03601 nucleus, nucleus
EES04142
EES07651
EES07899
EES08023
EES10633
EES10933
EES11211
EES11214
EES15709
EES16135
EES18519 nucleus, nucleus
KXG19514
KXG24829
KXG26835
KXG26836
KXG31094
KXG34016
KXG34945
OQU76347
OQU83236
OQU85000
OQU85840
OQU88150
OQU92128
OQU93090

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT3G45640.1 EES04142 AT1G12860.1 21798944
AT3G45640.1 EES00109 AT1G28280.1 24750137
AT3G45640.1 EES03601 AT1G28280.1 24750137
AT3G45640.1 EES18519 AT1G28280.1 24750137
AT3G45640.1 EES00109 AT1G28280.1 24750137
AT3G45640.1 EES03601 AT1G28280.1 24750137
AT3G45640.1 EES18519 AT1G28280.1 24750137
AT3G45640.1 EES08023 AT1G43700.1 23115249
AT3G45640.1 EES15709 AT1G43700.1 23115249
AT3G45640.1 KXG19514 AT1G51660.1 19513235
AT3G45640.1 OQU83236 AT1G51660.1 19513235
AT3G45640.1 OQU85840 AT1G51660.1 19513235
AT3G45640.1 KXG19514 AT1G51660.1 23115249
AT3G45640.1 OQU83236 AT1G51660.1 23115249
AT3G45640.1 OQU85840 AT1G51660.1 23115249
AT3G45640.1 OQU93090 AT1G78310.1 21798944
AT3G45640.1 EES07899 AT2G05230.1 21798944
AT3G45640.1 EES10633 AT2G05230.1 21798944
AT3G45640.1 EES10933 AT2G05230.1 21798944
AT3G45640.1 KXG34016 AT2G05230.1 21798944
AT3G45640.1 OQU85000 AT2G05230.1 21798944
AT3G45640.1 EES07899 AT2G05250.1 21798944
AT3G45640.1 EES10633 AT2G05250.1 21798944
AT3G45640.1 EES10933 AT2G05250.1 21798944
AT3G45640.1 KXG34016 AT2G05250.1 21798944
AT3G45640.1 OQU85000 AT2G05250.1 21798944
AT3G45640.1 EES07651 AT2G18730.1 21798944
AT3G45640.1 KXG24829 AT2G18730.1 21798944
AT3G45640.1 EER91871 AT2G35230.1 24750137
AT3G45640.1 EES00109 AT3G15300.1 24750137
AT3G45640.1 EES03601 AT3G15300.1 24750137
AT3G45640.1 EES18519 AT3G15300.1 24750137
AT3G45640.1 EER91113 AT3G63210.1 21798944
AT3G45640.1 EER94230 AT3G63210.1 21798944
AT3G45640.1 EES11211 AT4G17490.1 23300166
AT3G45640.1 EES11214 AT4G17490.1 23300166
AT3G45640.1 KXG26835 AT4G17490.1 23300166
AT3G45640.1 KXG26836 AT4G17490.1 23300166
AT3G45640.1 KXG31094 AT4G17490.1 23300166
AT3G45640.1 OQU76347 AT4G17490.1 23300166
AT3G45640.1 OQU92128 AT4G17490.1 23300166
AT3G45640.1 EER93093 AT5G13280.1 21798944
AT3G45640.1 KXG34945 AT5G13280.1 21798944
AT3G45640.1 OQU88150 AT5G13280.1 21798944
AT3G45640.1 EER91871 AT5G46780.1 24750137
AT3G45640.1 EES00109 AT5G53830.1 24750137
AT3G45640.1 EES03601 AT5G53830.1 24750137
AT3G45640.1 EES18519 AT5G53830.1 24750137
AT3G45640.1 EES16135 AT5G63310.1 12506203
AT3G45640.1 EES16135 AT5G63310.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d047758_P003 Maize cytosol 95.72 95.72
Os03t0285800-01 Rice cytosol 92.78 94.04
TraesCS4B01G197800.1 Wheat cytosol, nucleus 91.44 92.68
TraesCS4A01G106400.1 Wheat cytosol 91.44 92.68
HORVU4Hr1G057200.4 Barley cytosol 91.44 92.68
TraesCS4D01G198600.1 Wheat cytosol 91.18 92.41
Zm00001d028711_P003 Maize cytosol 91.44 90.96
GSMUA_Achr6P33100_001 Banana cytosol 83.16 84.74
GSMUA_Achr9P04280_001 Banana cytosol 82.09 83.2
Bra038281.1-P Field mustard cytosol 67.38 75.68
CDX99153 Canola cytosol 67.38 75.68
KRH24954 Soybean nucleus 74.6 75.2
VIT_06s0004g03540.t01 Wine grape cytosol 75.4 75.2
KRG89065 Soybean nucleus 74.33 74.93
AT3G45640.1 Thale cress cytosol 72.73 73.51
CDX86029 Canola cytosol 72.73 73.51
Solyc06g005170.2.1 Tomato cytosol 71.66 71.85
PGSC0003DMT400077272 Potato cytosol 71.12 71.31
EER89222 Sorghum cytosol 71.66 66.67
EER94589 Sorghum cytosol 65.24 64.72
EES13383 Sorghum cytosol 62.03 59.79
EER88895 Sorghum cytosol 52.67 53.39
EES06273 Sorghum cytosol 51.87 52.43
OQU87226 Sorghum cytosol 43.58 32.93
KXG29415 Sorghum cytosol 42.78 32.65
KXG28281 Sorghum cytosol 42.78 29.63
KXG21277 Sorghum cytosol 43.58 29.32
KXG33056 Sorghum cytosol 45.99 29.1
EER88927 Sorghum cytosol 44.65 29.09
EES19958 Sorghum cytosol 45.19 28.64
EES18732 Sorghum mitochondrion 44.65 28.21
EES20009 Sorghum cytosol 44.65 27.93
KXG32937 Sorghum cytosol 43.85 26.75
Protein Annotations
KEGG:04150+2.7.11.24Gene3D:1.10.510.10MapMan:13.4.4.1.4MapMan:18.4.3.6Gene3D:3.30.200.20UniProt:A0A1B6QNX6
GO:GO:0000003GO:GO:0000165GO:GO:0000166GO:GO:0000169GO:GO:0003674GO:GO:0003824
GO:GO:0004672GO:GO:0004674GO:GO:0004707GO:GO:0004871GO:GO:0005488GO:GO:0005524
GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005634GO:GO:0005737GO:GO:0006464
GO:GO:0006468GO:GO:0006950GO:GO:0006970GO:GO:0006979GO:GO:0007154GO:GO:0007165
GO:GO:0007275GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009409GO:GO:0009414
GO:GO:0009555GO:GO:0009605GO:GO:0009607GO:GO:0009611GO:GO:0009617GO:GO:0009628
GO:GO:0009719GO:GO:0009791GO:GO:0009856GO:GO:0009908GO:GO:0009987GO:GO:0010120
GO:GO:0010183GO:GO:0010200GO:GO:0010224GO:GO:0010229GO:GO:0016301GO:GO:0016310
GO:GO:0016740GO:GO:0019538GO:GO:0019748GO:GO:0042742GO:GO:0048481GO:GO:0050826
GO:GO:0050832GO:GO:0080136GO:GO:1901002InterPro:IPR000719EnsemblPlants:KXG39626ProteinID:KXG39626
ProteinID:KXG39626.1InterPro:Kinase-like_dom_sfInterPro:MAP_kinase_CSPFAM:PF00069PIRSF:PIRSF000654ScanProsite:PS00107
ScanProsite:PS00108ScanProsite:PS01351PFscan:PS50011PANTHER:PTHR24055PANTHER:PTHR24055:SF214InterPro:Prot_kinase_dom
InterPro:Protein_kinase_ATP_BSSMART:SM00220EnsemblPlantsGene:SORBI_3001G410100SUPFAM:SSF56112InterPro:Ser/Thr_kinase_ASUniParc:UPI0001C80B8E
Description
hypothetical protein
Coordinates
chr1:+:69359089..69363908
Molecular Weight (calculated)
43414.3 Da
IEP (calculated)
5.698
GRAVY (calculated)
-0.301
Length
374 amino acids
Sequence
(BLAST)
001: MSGGGMDGAP VAEFRPTVTH NGRFLQYNIF GNLFEITHKY QPPIMPIGRG AYGIVCSVMN FETREMVAIK KIANAFDNHM DAKRTLREIK LLRHLDHENI
101: IGIRDVIPPP IPQAFNDVYI GTELMDTDLH HIIRSNQELS EEHCQYFLYQ ILRGLKYIHS ANVIHRDLKP SNLLLNANCD LKICDFGLAR PSSESDMMTE
201: YVVTRWYRAP ELLLNSTDYS AAIDVWSVGC IFMELTNRQP LFPGRDHMHQ MRLITEVIGT PTDDELGFIR NEDARKYMRH LPQFPRRPFA SLFPKVQPVA
301: LDLIERMLTF NPLQRITVEE ALEHPYLERL HDIADEPICT EPFSFDFEQQ ALTEDQMKQL IFNEAIEMNP NFRY
Best Arabidopsis Sequence Match ( AT3G45640.1 )
(BLAST)
001: MNTGGGQYTD FPAVETHGGQ FISYDIFGSL FEITSKYRPP IIPIGRGAYG IVCSVLDTET NELVAMKKIA NAFDNHMDAK RTLREIKLLR HLDHENIIAI
101: RDVVPPPLRR QFSDVYISTE LMDTDLHQII RSNQSLSEEH CQYFLYQLLR GLKYIHSANI IHRDLKPSNL LLNANCDLKI CDFGLARPTS ENDFMTEYVV
201: TRWYRAPELL LNSSDYTAAI DVWSVGCIFM ELMNRKPLFP GKDHVHQMRL LTELLGTPTE SDLGFTHNED AKRYIRQLPN FPRQPLAKLF SHVNPMAIDL
301: VDRMLTFDPN RRITVEQALN HQYLAKLHDP NDEPICQKPF SFEFEQQPLD EEQIKEMIYQ EAIALNPTYG
Arabidopsis Description
MPK3Mitogen-activated protein kinase [Source:UniProtKB/TrEMBL;Acc:Q0WVS7]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.