CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 4
endoplasmic reticulum 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
EES08974
KXG28995
KXG29128
OQU88892

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G05230.1	EES08974	AT4G36690.1	21798944
AT2G05230.1	KXG28995	AT4G36690.1	21798944
AT2G05230.1	KXG29128	AT4G36690.1	21798944
AT2G05230.1	OQU88892	AT5G60340.1	21798944
AT2G05250.1	EES08974	AT4G36690.1	21798944
AT2G05250.1	KXG28995	AT4G36690.1	21798944
AT2G05250.1	KXG29128	AT4G36690.1	21798944
AT2G05250.1	OQU88892	AT5G60340.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d025584_P001	Maize	cytosol	83.29	82.26
Zm00001d025585_P001	Maize	cytosol	83.01	81.99
EES07899	Sorghum	cytosol	73.76	72.65
Os03t0401200-01	Rice	cytosol	67.82	65.64
TraesCS4D01G315600.1	Wheat	cytosol	64.23	61.1
TraesCS3D01G541800.1	Wheat	cytosol	62.43	60.59
TraesCS5A01G493100.1	Wheat	cytosol	63.67	60.58
TraesCS3B01G607500.1	Wheat	cytosol	62.02	60.51
TraesCS3A01G536400.1	Wheat	cytosol	61.88	60.38
HORVU4Hr1G083260.1	Barley	cytosol	63.54	60.29
HORVU3Hr1G117190.1	Barley	cytosol	61.6	58.53
TraesCS4B01G319100.1	Wheat	cytosol	55.66	56.6
VIT_17s0000g01140.t01	Wine grape	cytosol	16.99	48.81
VIT_01s0010g03770.t01	Wine grape	cytosol	16.16	48.35
Bra020958.1-P	Field mustard	cytosol	6.77	48.04
CDX76476	Canola	cytosol	6.77	48.04
PGSC0003DMT400039473	Potato	nucleus	9.67	47.3
Solyc03g019630.1.1	Tomato	nucleus	9.67	44.87
CDY60891	Canola	cytosol, mitochondrion, nucleus	10.64	44.25
Bra031906.1-P	Field mustard	cytosol	5.39	42.39
CDY31307	Canola	cytosol	5.39	42.39
KRH53452	Soybean	cytosol	40.33	42.2
KRH64496	Soybean	nucleus	40.19	42.05
KRG89459	Soybean	cytosol	6.22	41.28
Solyc03g007280.2.1	Tomato	cytosol	11.05	41.03
CDX99361	Canola	cytosol	8.15	40.41
Bra020957.1-P	Field mustard	cytosol	11.33	39.81
CDX76475	Canola	cytosol	11.33	39.81
CDY49460	Canola	nucleus	35.36	39.26
VIT_01s0010g03760.t01	Wine grape	cytosol	43.65	38.68
CDY19683	Canola	cytosol	36.88	38.53
PGSC0003DMT400023514	Potato	cytosol	38.95	38.37
Bra003079.1-P	Field mustard	cytosol	37.43	38.22
KRH09248	Soybean	nucleus	40.61	37.74
VIT_12s0057g00710.t01	Wine grape	cytosol	35.64	37.18
EES10633	Sorghum	cytosol	37.29	36.73
VIT_16s0050g02590.t01	Wine grape	cytosol	37.57	36.61
KRH73997	Soybean	nucleus	35.64	36.6
KRH16532	Soybean	cytosol	38.67	36.36
PGSC0003DMT400059130	Potato	cytosol	38.95	36.25
KRH38748	Soybean	nucleus	40.61	36.21
KRH18160	Soybean	nucleus	38.54	36.19
OQU85000	Sorghum	cytosol	36.33	36.13
Solyc01g044270.2.1	Tomato	cytosol	38.81	36.12
CDY27107	Canola	nucleus	18.09	35.79
KRH14137	Soybean	nucleus	34.94	35.78
CDX99362	Canola	nucleus	13.81	35.09
CDY12382	Canola	nucleus	17.68	34.97
Bra038959.1-P	Field mustard	nucleus	18.51	34.81
AT5G37380.6	Thale cress	nucleus	20.72	34.8
Bra034258.1-P	Field mustard	cytosol	29.7	34.73
CDY60893	Canola	cytosol	7.6	34.59
CDY60894	Canola	cytosol	7.6	34.59
CDX76752	Canola	nucleus	29.56	34.57
CDY35353	Canola	cytosol	29.7	34.51
CDX76994	Canola	nucleus	27.49	34.19
Bra007790.1-P	Field mustard	nucleus	27.76	33.95
CDY11521	Canola	nucleus	27.76	33.95
AT5G53150.3	Thale cress	cytosol	35.22	33.77
CDX76474	Canola	cytosol	11.19	33.75
AT2G25560.1	Thale cress	cytosol	30.52	33.69
CDX78942	Canola	cytosol	14.23	33.66
VIT_17s0000g01150.t01	Wine grape	nucleus	40.75	33.3
Bra035378.1-P	Field mustard	cytosol	30.66	32.27
CDY09330	Canola	cytosol	9.94	32.0
AT5G35753.1	Thale cress	cytosol	18.92	31.93
Bra013179.1-P	Field mustard	nucleus	30.52	31.89
CDX93081	Canola	nucleus	30.52	31.89
CDY15046	Canola	nucleus	30.39	31.88
CDX99360	Canola	cytosol	14.64	31.83
CDX76473	Canola	cytosol	10.64	31.82
CDY60890	Canola	cytosol	10.64	31.82
CDY47298	Canola	cytosol	25.55	31.68
PGSC0003DMT400085016	Potato	cytosol	5.66	31.54
CDX74632	Canola	cytosol	25.55	31.52
AT2G05230.1	Thale cress	cytosol	30.52	31.3
AT2G05250.1	Thale cress	cytosol	30.52	31.3
PGSC0003DMT400039476	Potato	nucleus	34.67	31.18
Solyc07g047690.1.1	Tomato	nucleus	33.43	30.71
PGSC0003DMT400015678	Potato	nucleus	33.29	30.58
PGSC0003DMT400048481	Potato	cytosol	33.01	30.52
KRH54176	Soybean	nucleus	33.29	30.39
Solyc05g040050.1.1	Tomato	nucleus	32.73	30.27
KRH63773	Soybean	nucleus	33.98	30.26
PGSC0003DMT400086295	Potato	mitochondrion	8.98	29.82
KXG34016	Sorghum	nucleus	34.12	29.79
OQU79981	Sorghum	cytosol	12.85	29.34
CDY60010	Canola	cytosol, mitochondrion, nucleus	8.84	29.09
AT5G50115.1	Thale cress	cytosol	19.2	28.66
Bra020955.1-P	Field mustard	cytosol	10.77	27.66
Solyc03g019640.1.1	Tomato	nucleus	35.22	27.45
EES11310	Sorghum	cytosol, plastid	18.51	27.24
Bra020956.1-P	Field mustard	nucleus	13.12	27.22
PGSC0003DMT400092645	Potato	cytosol	4.7	26.36
CDY12569	Canola	cytosol	12.85	25.98
Bra040300.1-P	Field mustard	cytosol	13.12	25.75
AT4G19580.1	Thale cress	cytosol	11.05	25.64
PGSC0003DMT400092668	Potato	cytosol	5.11	25.0
KXG19130	Sorghum	cytosol	17.13	24.51
Bra013403.1-P	Field mustard	nucleus	18.09	24.17
EES08665	Sorghum	nucleus	22.65	24.15
CDX78941	Canola	nucleus	18.09	23.73
PGSC0003DMT400094007	Potato	extracellular, plasma membrane	9.12	23.16
Bra013404.1-P	Field mustard	nucleus	14.09	22.87
Solyc01g057650.1.1	Tomato	cytosol	5.11	21.64
AT5G62780.1	Thale cress	cytosol	5.94	20.77
AT4G19570.1	Thale cress	nucleus	14.64	19.0
EES00793	Sorghum	cytosol	25.41	18.83
Solyc07g039220.1.1	Tomato	cytosol	9.12	18.7
KXG32106	Sorghum	cytosol	25.41	18.2
EER88793	Sorghum	cytosol	23.2	17.72
KXG28768	Sorghum	nucleus	22.65	16.82
PGSC0003DMT400080343	Potato	cytosol	14.09	16.53
Solyc01g057750.1.1	Tomato	cytosol	14.09	16.45
OQU83710	Sorghum	cytosol	22.1	16.43
PGSC0003DMT400096427	Potato	cytosol	13.95	16.42
EER98396	Sorghum	nucleus	25.0	15.86
KXG37199	Sorghum	cytosol	5.94	15.69
EES09993	Sorghum	nucleus	23.48	15.41
OQU83709	Sorghum	cytosol	23.76	14.8
KXG34037	Sorghum	cytosol	15.06	14.23
OQU83714	Sorghum	cytosol, nucleus, plastid	16.3	11.17
KXG32108	Sorghum	cytosol	4.97	5.97
Bra002184.1-P	Field mustard	cytosol	0.14	0.38

Protein Annotations

Gene3D:1.10.287.110	MapMan:35.2	EntrezGene:8073421	UniProt:C5Y9S9	ncoils:Coil	InterPro:DUF3444
InterPro:DnaJ_domain	EnsemblPlants:EES10933	ProteinID:EES10933	ProteinID:EES10933.1	InterPro:IPR001623	InterPro:IPR036869
InterPro:J_dom_sf	PFAM:PF00226	PFAM:PF11926	PRINTS:PR00625	PFscan:PS50076	PANTHER:PTHR44137
PANTHER:PTHR44137:SF4	SMART:SM00271	EnsemblPlantsGene:SORBI_3006G104800	SUPFAM:SSF46565	UniParc:UPI0001A86E72	RefSeq:XP_002446605.1
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr6:+:47464174..47467500

Molecular Weight (calculated)

81036.8 Da

IEP (calculated)

8.781

GRAVY (calculated)

-0.595

Length

724 amino acids

Sequence
(BLAST)

001: MECNKDEAQR AKVIAKRKFK ARDLQGARKF ALKAQTLFPG LEGIDQMIAT FDIYLASAAG DKDWYSILSV PMNADDENIK KQYEKLAIQF HPDKNKSVGA
101: EGAFRMVQEA YMVLSDRTKR AVYDHKRNVR ISQQRTLQSS KASMVPGASN DFYNFAANAT TASKPTVSKQ TVGSATHALD APPPAPSTTT STPVAQPNTF
201: WTLCNKCKMN YEYLRMYLNQ KLRCRSCREL FLAKEVQRPP IGNMVQDSNI SGANQNATTN RNLDGGPISR AVGVASATAS SVAAVAQAAN VVHQTYEKVR
301: RERENVQAAV RREEALRRKY NPLKRHGSMS ENANLGAVAA TSRKKTRTMA KDAEIGSSSI ISGLGANFFR VPGGDGGPNW KPRPLIHLSL AKTFSQMDLR
401: GLLLEKVKTE LKNKLTVIKN KTSQVVASEK VSKKVVVKEN GGDNEALAPE DPITNKDAHD DPEEIGSNTS TNTGNEDDGR LSFNVPDPDF CDFDKNRTEE
501: CFRSDQIWAS YDEDGMPRYY AFIQKVLSLK PFKLRISYLT SRTNSEFGTL NWVSSGFIKT CGDFRIDKYE SCDIVNMFSH QMKWEKGLRG IIKIYPQKGD
601: IWAIYQNWSP DWDKDTPDNV LHAYNVIEIL DAYDEEHGIS IIPLIKVTGF QTIFQRHQDP NTTMKIPKEE MFRFSHQVPF YRMSGEEAPN VPKDSYELDP
701: AAIPKELLEG ITETVEANGT STVD

Best Arabidopsis Sequence Match ( AT5G53150.1 )
(BLAST)

001: MECNKDEAKR AMDIAERKMT EKDYTGAKKF ANKAQNLFPE LDGLKQLFVA INVYISGEKT FAGEADWYGV LGVDPFASDE ALKKQYRKLV LMLHPDKNKC
101: KGAEGAFNLV AEAWALLSDK DKRILYNVKR GKDVKAAQQR FPTTQREIPS HQPTSNGIPN VREHVVSSAR ARYKPATRKP AARMDRSRTG SPAFVYPTQE
201: SSTFWTMCNK CDTQYEYQRV YLNQTLLCPH CHHGFVAEEK TPPTNIPKPP VNISSNQHHR SSKNQASNKN SNGSSYRREP ATSVNHNFQW DSSRMGGSYS
301: RNATNETANV VQQGQDKLKR VFWETQEREA ARGFTNSDLG NFKRQKTDDS HMRGPSAGSR HPYVQALLRS DIKKALMDRG QSEIFKRLPM MIAKMEGKVN
401: PTEGEKNSTK AMSSKASEVE RSKMSSTANE VERSVEVIPH ESDEVKEIVV PDSDFHNFDL DRSESAFKDD QIWAAYDDAD GMPRFYARIQ KVISVNPFKL
501: KISWLNSKTT SEFGPIDWMG AGFAKSCGDF RCGRYESTDT LNAFSHSVDF TKGARGLLHI LPKKGQVWAL YRNWSPEWDK NTPDEVKHKY EMVEVLDDYT
601: EDDQSLTVAL LLKAEGFRVV FRRCTEKLGV RKIAKEEMLR FSHQVPHYIL TGKEADNAPE GFLELDPAAT PCAFSSENAE ADEKSEAVKE NEQGEAVKEN
701: EESEALKENE ESEAVKENEE VGMDLD

Arabidopsis Description

DnaJ heat shock amino-terminal domain protein [Source:UniProtKB/TrEMBL;Acc:Q9FGM2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.