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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 3
  • mitochondrion 1
  • cytosol 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Os11t0574200-00 Rice cytosol 17.95 53.52
OQU83710 Sorghum cytosol 46.26 46.3
TraesCS2A01G084900.1 Wheat nucleus 48.92 46.13
HORVU7Hr1G050080.1 Barley nucleus 48.72 45.94
Os11t0578100-00 Rice cytosol 48.92 45.3
EES00793 Sorghum cytosol 45.13 45.04
TraesCS2B01G099600.2 Wheat nucleus 49.03 43.57
EES09993 Sorghum nucleus 49.23 43.52
EER88793 Sorghum cytosol 42.26 43.46
TraesCS2D01G082800.1 Wheat nucleus 48.72 43.22
OQU83709 Sorghum cytosol 50.67 42.51
PGSC0003DMT400057888 Potato cytosol 8.1 39.9
PGSC0003DMT400089411 Potato cytosol 8.62 37.5
Bra039476.1-P Field mustard cytosol 7.49 35.44
Solyc01g067770.1.1 Tomato extracellular, vacuole 9.64 34.43
CDX74107 Canola cytosol 9.44 34.33
OQU83714 Sorghum cytosol, nucleus, plastid 36.92 34.09
VIT_05s0020g02050.t01 Wine grape nucleus 28.1 32.81
CDY13919 Canola nucleus 15.69 32.42
Bra001194.1-P Field mustard cytosol 6.56 31.68
CDX74108 Canola cytosol 6.56 31.68
CDX92582 Canola nucleus 26.87 31.12
EES08665 Sorghum nucleus 21.64 31.08
OQU79981 Sorghum cytosol 9.95 30.6
PGSC0003DMT400058792 Potato nucleus 28.72 30.53
CDX88917 Canola nucleus 10.26 30.12
KRH50936 Soybean nucleus 29.23 29.75
KRH11282 Soybean nucleus 29.23 29.44
PGSC0003DMT400058788 Potato nucleus 14.67 29.24
Solyc01g067780.1.1 Tomato cytosol 27.08 29.24
KXG32106 Sorghum cytosol 30.26 29.18
CDX70837 Canola mitochondrion 15.08 29.17
EER98396 Sorghum nucleus 34.05 29.1
KRH21004 Soybean nucleus 28.72 28.93
PGSC0003DMT400086601 Potato cytosol 5.95 28.86
CDY08056 Canola nucleus 17.95 27.87
Bra002183.1-P Field mustard nucleus 16.21 27.82
Solyc01g098250.2.1 Tomato nucleus 28.31 27.79
CDY13918 Canola nucleus 16.31 27.75
CDY24701 Canola nucleus 16.62 27.5
PGSC0003DMT400094016 Potato nucleus 8.21 27.3
KRH02180 Soybean cytosol, nucleus, plastid 29.23 27.3
Bra006478.1-P Field mustard nucleus 14.87 27.26
CDX88918 Canola cytosol 14.87 27.26
KRG92798 Soybean cytosol 19.69 27.08
CDX70843 Canola extracellular, golgi 14.87 26.8
Bra009972.1-P Field mustard nucleus 17.13 26.55
CDX86172 Canola nucleus 17.13 26.55
KRG96896 Soybean cytosol 28.72 26.46
PGSC0003DMT400057904 Potato nucleus 29.33 26.46
Bra006479.1-P Field mustard cytosol 14.97 26.45
Bra006476.1-P Field mustard nucleus 15.9 26.36
CDX88920 Canola nucleus 15.9 26.36
CDX70840 Canola nucleus 15.69 26.2
KRH68628 Soybean cytosol 28.62 26.15
CDX80667 Canola nucleus 17.74 26.02
CDY19714 Canola nucleus 25.54 25.88
Solyc08g029220.1.1 Tomato nucleus 20.92 25.86
PGSC0003DMT400038431 Potato nucleus 20.82 25.79
PGSC0003DMT400057894 Potato cytosol 10.26 25.77
CDX99992 Canola cytosol 24.82 25.72
Solyc01g098340.2.1 Tomato cytosol 21.03 25.62
Solyc01g098310.1.1 Tomato cytosol 11.9 25.44
KRH34003 Soybean cytosol 7.59 25.43
PGSC0003DMT400057893 Potato cytosol 12.62 25.41
VIT_14s0030g00640.t01 Wine grape nucleus 30.15 25.15
Solyc10g007630.1.1 Tomato cytosol 12.51 25.1
Bra020757.1-P Field mustard nucleus 16.72 24.96
CDX92586 Canola nucleus 8.82 24.57
KRH34004 Soybean cytosol 8.0 24.53
CDY05255 Canola nucleus 16.51 24.32
CDY27809 Canola nucleus 24.72 24.29
PGSC0003DMT400054841 Potato cytosol 12.31 24.29
Bra006473.1-P Field mustard plastid 17.44 24.18
PGSC0003DMT400057887 Potato cytosol 20.82 24.11
CDX88924 Canola plastid 17.44 24.05
KXG34037 Sorghum cytosol 18.26 23.24
AT4G19590.2 Thale cress nucleus 8.82 22.99
EES07899 Sorghum cytosol 17.13 22.72
EES10933 Sorghum cytosol 16.82 22.65
EES10633 Sorghum cytosol 16.92 22.45
AT5G37760.1 Thale cress cytosol 4.72 22.22
OQU85000 Sorghum cytosol 16.41 21.98
EES11310 Sorghum cytosol, plastid 10.56 20.93
KXG32108 Sorghum cytosol 12.92 20.9
CDY41935 Canola cytosol 11.38 20.86
Bra024236.1-P Field mustard nucleus 7.79 20.65
KXG19130 Sorghum cytosol 10.67 20.55
CDY27796 Canola cytosol 11.08 20.42
CDY41919 Canola nucleus, plastid 24.92 20.4
Bra039461.1-P Field mustard cytosol 11.08 20.26
Bra039477.1-P Field mustard plastid 10.97 19.89
Solyc01g098330.1.1 Tomato nucleus 8.1 19.27
KXG34016 Sorghum nucleus 16.31 19.18
KXG37199 Sorghum cytosol 5.33 18.98
CDX92856 Canola nucleus 9.13 18.94
CDY29872 Canola cytosol 8.41 18.39
CDY27811 Canola nucleus 7.9 16.08
CDY13917 Canola endoplasmic reticulum, extracellular, mitochondrion 6.36 14.87
Bra002182.1-P Field mustard nucleus 15.79 14.19
CDX70844 Canola mitochondrion, plasma membrane 11.9 13.58
Bra039474.1-P Field mustard nucleus 19.38 12.39
Bra006477.1-P Field mustard cytosol 17.44 12.36
CDX70841 Canola nucleus 17.13 11.54
CDX88919 Canola cytosol 16.41 10.12
CDY41917 Canola nucleus 9.85 10.04
Protein Annotations
EnsemblPlants:KXG28768EnsemblPlantsGene:SORBI_3005G163500Gene3D:1.10.287.110InterPro:DUF3444InterPro:DnaJ_domainInterPro:IPR001623
InterPro:IPR036869InterPro:J_dom_sfPANTHER:PTHR10825PANTHER:PTHR10825:SF27PFAM:PF00226PFAM:PF11926
PFscan:PS50076ProteinID:KXG28768ProteinID:KXG28768.1ProteinID:OQU83717.1ProteinID:OQU83718.1SMART:SM00271
SUPFAM:SSF46565UniParc:UPI00081AC6F1UniProt:A0A1B6PSX4MapMan:35.2::
Description
hypothetical protein
Coordinates
chr5:-:63878741..63885714
Molecular Weight (calculated)
110590.0 Da
IEP (calculated)
5.301
GRAVY (calculated)
-0.504
Length
975 amino acids
Sequence
(BLAST)
001: MMECNREEGL RAGRIALTKL KKKDFRGAQR IALKAQRLYP ELENLCQLLA VCEVHCAAEI EINGDLDWYG ILQVEATAND EVITKQYCKL SYLLHPDKNT
101: LPGAEAAFKL VCIAHKILCD HMMHFLYDIK TQHVFRKVAK KGTHLPESTH ANKGDAIRHR VPSELILVFR TICPHCQKQF LFYQKNIFVR CDDCGKTFFA
201: FKLHEEAVPL RFLPPAPYNA QVSPEMLSCH PNQWLDCTKL QSAVGDMDSR ATMHATQSDE HVKWDGRSCD DGEGNFSAIE VEAVQLLAMD QIISPEAAVE
301: KDKTESMTLE PNLSREDARA LSNANAAGSC SLQRFDKRKQ DDGIGSSHNM DSCNNKRQRI YDSVSKANSS DDTMCNENAA SAEDQSSDRC PSKFDNPEEG
401: NTAHEDCQQI YRKHTSDIST QWSNGSSMIA CACTEIFNFE THREANRFAV GQIWALYDNF DLMPRFYAQI MHFDAHNDKI HLTWLEHDAT NKEEEKWMDK
501: KLPVACGSFR LQPTVDTSQD RFMFSHTVAW TKGMKGNSYD IYPNKGEVWA LYKGWSMQWS SDTDNHRSYE YEVVEVLSTM SAEDGATVIP LVKIKDFVSL
601: FARAKGMSSF FIPSSELLRF SHSISFYRTN GNEKMGVPRG FLELDTACLP SDLDAAFSSV TLVSYMFLGN MTGCVFADLT TESADNKMDC GDELITGKEN
701: SLEQNVCQSI SADDTVDISS EKNTSTQKNA HGANESGDSS QQTCVFPNSY SYPDPEFHDF EEDRSFKKFK HGQIWAMYSD ADKFPKFYAW IRKVEPEPFR
801: VHLNWLEARP KSEQEKRWLE QDLSISCGTF ELVRNWRTEY DASSFFSHLV DARPTGMKRQ FEVFPQVGQI WATYMNWAPG WVPPCDGSCE YVIGEIIERT
901: EAGTKLTVLT QVGGYRCVFK PDNTKGVLEI PAGENLRFSH RVPSFCLTEE MGGTLRGFYE LDPASLPDAF LHGDT
Best Arabidopsis Sequence Match ( AT5G27240.3 )
(BLAST)
0001: MDWNKEEACR AKTLAEDKMK EGDFVGAQKL LLKAQSLFSG LESLPQMLAV CDVHNSAEKK INCLENWYGI LQVMHFADDA TIKKQVRKLA LLLHPDKNQF
0101: PGAEAAFKLV WDASRFLADK DKRSQYDIRR RIYLRLATNQ LNANSGLQCA ATNSATDTFW TCCEHCGYRY KYLRKYVNIL LNCNICQRSY MAYDTGFNEA
0201: PSKSNTGQKE VQNQGPCNTS LNTNGESIGA QPGSVAAEVD KKGTFNKKFN KRNGGGESKK TEVKNSKIET EFVRNDDEEK MKSAAKLHKP HPEVTEPEIG
0301: ASKSVPDESV SRSDEAPSTS KDKNKMKKGV EESINVDGSD FIKDKAYSKD NNKRKSPRRS QQSSYAEEEK ISDNSLGPPK KRLRSNVGLK SEQTTRKGLV
0401: GVGSSKRFDS GGGSSAPSCA FKRKAKKFVD SGYQEISSVK DKEREVRKAS GEGVVMEAKI DNNHNPNENL ITEDLPDPEF SNFELTTSCF GVNQVWSMYD
0501: PIDGMPRLYA RIDKVLVPEF KLWITWIDPL QDNKDNSIPI ACGIFQGGGS EEENDHLKFS CQMFHLTRNN SVVIYPRKGE IWAIFRGWDI SWSASSENHK
0601: HPYEYDFVEV LSNFNDENGL GVGFLGKVEG FVSLFRQDAQ DGVLQLQIPP SQMLRFSHKV PSFKMTGKER EGVPPGCFEL DPAALPKELF EVYDSKVDVG
0701: LDRELPNGKT GGPFPEASKV EMQANTTRES SPFKKKRPKV HDNHGSFSKE SDGRRTNHER NSAKESRKSV KAVDALNLRK SPRLLSETNS QANSRSGRQI
0801: AEKKSANNGE SCGKPGGLSL SGEKMSEKTI TRMRKTPQDI HKPTVNVKKH GRNDESLSQS RGDGLLTQLN GNMKSSEPET RVPSSCKTVK ENTFNFENQR
0901: SWDKFQIDQI WAIYSNDKGS PRKYAQIKKI DTSPEFKLHV APLELYRPPI HMPRPVCCGR FKLKTGKAEV YVPSSFSHQV KAVKTKKNRF EVYPGKGEIW
1001: ALYKNCNTRD YTETEELEIV EVVETDEQRI QAMTLTAKGF NNKPLYRRSE ESNASFIDIP KTEVCRFSHQ IPAFRHESRA TRFGDGQYWE LDLKAVLGLN
1101: LKNP
Arabidopsis Description
DNAJ heat shock N-terminal domain-containing protein [Source:UniProtKB/TrEMBL;Acc:F4K2V2]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.