Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra006478.1-P | Field mustard | nucleus | 98.87 | 98.87 |
| CDX70843 | Canola | extracellular, golgi | 86.47 | 85.03 |
| CDX88917 | Canola | nucleus | 46.24 | 74.1 |
| CDX70837 | Canola | mitochondrion | 55.45 | 58.53 |
| CDY13918 | Canola | nucleus | 54.89 | 50.96 |
| PGSC0003DMT400057888 | Potato | cytosol | 18.23 | 48.99 |
| CDX88924 | Canola | plastid | 59.02 | 44.41 |
| PGSC0003DMT400089411 | Potato | cytosol | 16.73 | 39.73 |
| CDX92583 | Canola | mitochondrion, plastid | 25.56 | 39.19 |
| CDX74108 | Canola | cytosol | 14.66 | 38.61 |
| CDX70840 | Canola | nucleus | 41.35 | 37.67 |
| CDX88920 | Canola | nucleus | 41.17 | 37.24 |
| CDX92586 | Canola | nucleus | 23.12 | 35.14 |
| CDX70844 | Canola | mitochondrion, plasma membrane | 50.94 | 31.73 |
| PGSC0003DMT400057894 | Potato | cytosol | 17.67 | 24.23 |
| CDY13917 | Canola | endoplasmic reticulum, extracellular, mitochondrion | 18.05 | 23.02 |
| CDX92582 | Canola | nucleus | 36.09 | 22.8 |
| PGSC0003DMT400057893 | Potato | cytosol | 20.11 | 22.11 |
| Os11t0574200-00 | Rice | cytosol | 13.53 | 22.02 |
| CDX70841 | Canola | nucleus | 58.83 | 21.63 |
| Solyc01g098310.1.1 | Tomato | cytosol | 18.42 | 21.49 |
| CDY13919 | Canola | nucleus | 18.98 | 21.4 |
| GSMUA_Achr11P... | Banana | nucleus | 25.94 | 21.1 |
| Solyc10g007630.1.1 | Tomato | cytosol | 19.17 | 20.99 |
| GSMUA_Achr5P00460_001 | Banana | cytosol | 28.38 | 20.77 |
| TraesCS4A01G214500.1 | Wheat | nucleus | 25.94 | 20.6 |
| Solyc01g098330.1.1 | Tomato | nucleus | 15.6 | 20.24 |
| PGSC0003DMT400054841 | Potato | cytosol | 18.8 | 20.24 |
| CDY60893 | Canola | cytosol | 6.02 | 20.13 |
| CDY60894 | Canola | cytosol | 6.02 | 20.13 |
| Solyc01g098340.2.1 | Tomato | cytosol | 30.08 | 20.0 |
| GSMUA_Achr2P02410_001 | Banana | cytosol | 28.57 | 19.64 |
| PGSC0003DMT400057887 | Potato | cytosol | 30.26 | 19.12 |
| CDX88919 | Canola | cytosol | 56.2 | 18.91 |
| Zm00001d040846_P001 | Maize | cytosol | 30.45 | 17.31 |
| CDY29872 | Canola | cytosol | 14.29 | 17.04 |
| HORVU2Hr1G084660.1 | Barley | cytosol | 27.63 | 16.9 |
| CDY24701 | Canola | nucleus | 18.61 | 16.81 |
| Zm00001d052947_P001 | Maize | plastid | 27.26 | 16.76 |
| CDY41935 | Canola | cytosol | 16.73 | 16.73 |
| EER88793 | Sorghum | cytosol | 29.7 | 16.67 |
| Solyc01g098250.2.1 | Tomato | nucleus | 31.02 | 16.62 |
| CDX92856 | Canola | nucleus | 14.66 | 16.6 |
| TraesCS2B01G095100.1 | Wheat | cytosol | 26.88 | 16.55 |
| TraesCS4B01G101500.1 | Wheat | cytosol | 27.82 | 16.52 |
| KRG92798 | Soybean | cytosol | 21.99 | 16.5 |
| CDY27811 | Canola | nucleus | 14.85 | 16.49 |
| EES00793 | Sorghum | cytosol | 30.26 | 16.48 |
| CDY05255 | Canola | nucleus | 20.49 | 16.47 |
| HORVU2Hr1G013270.2 | Barley | cytosol | 26.88 | 16.46 |
| CDY08056 | Canola | nucleus | 19.17 | 16.24 |
| TraesCS2D01G077700.1 | Wheat | cytosol | 26.32 | 16.22 |
| CDY27796 | Canola | cytosol | 15.98 | 16.07 |
| TraesCS2B01G366100.1 | Wheat | cytosol | 27.63 | 16.0 |
| TraesCS2A01G347700.1 | Wheat | mitochondrion | 27.26 | 15.78 |
| Os01t0375100-01 | Rice | nucleus | 29.7 | 15.67 |
| CDX86172 | Canola | nucleus | 18.42 | 15.58 |
| Os11t0578100-00 | Rice | cytosol | 30.83 | 15.57 |
| PGSC0003DMT400057904 | Potato | nucleus | 31.58 | 15.54 |
| CDY51818 | Canola | nucleus | 11.47 | 15.4 |
| KRG96896 | Soybean | cytosol | 30.26 | 15.22 |
| KRH68628 | Soybean | cytosol | 30.45 | 15.18 |
| TraesCS3A01G213800.3 | Wheat | nucleus | 29.14 | 15.15 |
| TraesCS2A01G084900.1 | Wheat | nucleus | 29.32 | 15.09 |
| TraesCS3D01G215900.1 | Wheat | nucleus | 28.95 | 15.04 |
| Os06t0535300-01 | Rice | nucleus | 28.76 | 15.03 |
| PGSC0003DMT400038431 | Potato | nucleus | 22.18 | 14.99 |
| OQU83710 | Sorghum | cytosol | 27.44 | 14.99 |
| HORVU4Hr1G043860.4 | Barley | cytosol | 26.69 | 14.96 |
| KXG32106 | Sorghum | cytosol | 28.38 | 14.94 |
| TraesCS3B01G244000.4 | Wheat | nucleus | 28.95 | 14.89 |
| KXG28768 | Sorghum | nucleus | 27.26 | 14.87 |
| Zm00001d008412_P001 | Maize | cytosol | 28.38 | 14.82 |
| CDX99992 | Canola | cytosol | 26.13 | 14.77 |
| HORVU6Hr1G033850.1 | Barley | cytosol | 27.07 | 14.77 |
| TraesCS6A01G167100.1 | Wheat | cytosol | 27.07 | 14.75 |
| TraesCS6B01G194500.1 | Wheat | cytosol | 27.07 | 14.75 |
| CDX80667 | Canola | nucleus | 18.42 | 14.74 |
| Solyc08g029220.1.1 | Tomato | nucleus | 21.8 | 14.7 |
| CDY19714 | Canola | nucleus | 26.5 | 14.66 |
| HORVU7Hr1G050080.1 | Barley | nucleus | 28.38 | 14.6 |
| TraesCS6D01G155600.1 | Wheat | cytosol | 26.69 | 14.55 |
| Zm00001d008413_P001 | Maize | cytosol | 27.82 | 14.54 |
| TraesCS2A01G080400.1 | Wheat | cytosol | 21.99 | 14.53 |
| EER98396 | Sorghum | nucleus | 31.02 | 14.46 |
| CDX76994 | Canola | nucleus | 15.79 | 14.43 |
| TraesCS2D01G082800.1 | Wheat | nucleus | 29.51 | 14.29 |
| TraesCS2B01G099600.2 | Wheat | nucleus | 29.32 | 14.22 |
| CDY40464 | Canola | nucleus | 12.78 | 14.17 |
| EES09993 | Sorghum | nucleus | 29.32 | 14.14 |
| CDY35353 | Canola | cytosol | 16.54 | 14.13 |
| Zm00001d019461_P002 | Maize | cytosol | 29.51 | 14.07 |
| CDY49460 | Canola | nucleus | 17.11 | 13.96 |
| TraesCS2D01G078000.1 | Wheat | cytosol | 16.73 | 13.84 |
| CDY27809 | Canola | nucleus | 25.75 | 13.81 |
| CDY32121 | Canola | nucleus | 12.03 | 13.76 |
| HORVU3Hr1G051850.2 | Barley | nucleus | 29.14 | 13.7 |
| CDY19683 | Canola | cytosol | 17.67 | 13.56 |
| CDX76752 | Canola | nucleus | 15.6 | 13.41 |
| CDY11521 | Canola | nucleus | 14.85 | 13.34 |
| CDY47298 | Canola | cytosol | 14.47 | 13.18 |
| CDX74632 | Canola | cytosol | 14.47 | 13.12 |
| TraesCS1B01G054900.1 | Wheat | nucleus | 29.14 | 13.0 |
| TraesCS1D01G042900.1 | Wheat | nucleus | 29.14 | 13.0 |
| OQU83714 | Sorghum | cytosol, nucleus, plastid | 25.75 | 12.97 |
| HORVU1Hr1G008940.2 | Barley | nucleus | 28.76 | 12.77 |
| OQU83709 | Sorghum | cytosol | 27.82 | 12.74 |
| EES08665 | Sorghum | nucleus | 16.17 | 12.67 |
| TraesCS1A01G042500.1 | Wheat | nucleus | 28.2 | 12.61 |
| CDX93081 | Canola | nucleus | 15.23 | 11.69 |
| CDY15046 | Canola | nucleus | 15.04 | 11.59 |
| CDY41919 | Canola | nucleus, plastid | 25.38 | 11.34 |
| Os11t0573800-00 | Rice | nucleus | 17.48 | 10.13 |
| CDY34931 | Canola | cytosol | 3.95 | 9.33 |
| CDY31307 | Canola | cytosol | 1.5 | 8.7 |
| CDY60010 | Canola | cytosol, mitochondrion, nucleus | 3.57 | 8.64 |
| CDY41917 | Canola | nucleus | 14.85 | 8.26 |
| CDX74082 | Canola | cytosol | 3.38 | 7.96 |
| TraesCS2D01G077900.1 | Wheat | cytosol | 7.33 | 7.22 |
| CDX76476 | Canola | cytosol | 1.32 | 6.86 |
| CDX99362 | Canola | nucleus | 3.57 | 6.67 |
| CDX99361 | Canola | cytosol | 1.69 | 6.16 |
| CDY12569 | Canola | cytosol | 3.95 | 5.87 |
| CDY12382 | Canola | nucleus | 3.38 | 4.92 |
| CDX92584 | Canola | mitochondrion | 3.2 | 4.87 |
| CDY27107 | Canola | nucleus | 3.2 | 4.64 |
| CDX78941 | Canola | nucleus | 4.7 | 4.53 |
| CDX74107 | Canola | cytosol | 2.26 | 4.48 |
| CDX76475 | Canola | cytosol | 1.69 | 4.37 |
| CDX76474 | Canola | cytosol | 1.88 | 4.17 |
| CDY60890 | Canola | cytosol | 1.88 | 4.13 |
| CDY60891 | Canola | cytosol, mitochondrion, nucleus | 1.32 | 4.02 |
| CDY08035 | Canola | cytosol | 0.56 | 3.03 |
| KRH34004 | Soybean | cytosol | 1.69 | 2.83 |
| CDX99360 | Canola | cytosol | 1.69 | 2.7 |
| CDX78942 | Canola | cytosol | 1.5 | 2.61 |
| KRH34003 | Soybean | cytosol | 1.32 | 2.41 |
| CDY09330 | Canola | cytosol | 0.94 | 2.22 |
| CDX76473 | Canola | cytosol | 0.94 | 2.07 |
Protein Annotations
| EnsemblPlants:CDX88918 | EnsemblPlantsGene:GSBRNA2T00149014001 | InterPro:DUF3444 | PANTHER:PTHR45089 | PFAM:PF11926 | ProteinID:CDX88918 |
| ProteinID:CDX88918.1 | UniParc:UPI0004EE6ED8 | MapMan:35.2 | : | : | : |
Description
BnaA03g07310D
Coordinates
chrLK031856:-:1593196..1595144
Molecular Weight (calculated)
59964.3 Da
IEP (calculated)
6.510
GRAVY (calculated)
-0.352
Length
532 amino acids
Sequence
(BLAST)
(BLAST)
001: MLVDYSHEEG VAIKRSSGTA AYYLASDENV NVHSLRLSCV GGKRKRNELG GSNDDSAGLK FNDFEKLRKE VNFSVGETWA LYDQVDGMPR LYARIRKVSA
101: PSFGLRITHL EPDPDDEREV LWFEQDLPVS TGQFRLGMNE NTKDCSLFSH VIHCKEGSNT GHLIVSPRKG ETWALFKNWD IIKWSSEPDS HSSYKYEIVE
201: ILSDHADGTG VSVAFLHKAK GFASVFFRMG TGDDADMIQI PSHSLYRFSH MIPSFKLTGT EAKDLPKDAY ELDQAALPAT TVQEKPVPSH IIPVPKPEAL
301: CLPSSEGKVI KTGQFWAFGG DYDDTPRYYG RIQKITVTQT FEQTAETKVH VCRLKATSFP QNVIKWKDKS MPVGCGTFSM LKNCSTLYPQ HLTHQIFPQT
401: SMDGNECTIL PKVGQLWVIY RLWAPHFGVG ALDEHCLDFD MVQVLDDAFN YKVLALEQVL VISEEKNKFF RAAKSRPSYC YDEDGPGVIF TIPQSKMLRF
501: SHPIPASRVT KEVDGEMIVL FEVDKKALPY GW
101: PSFGLRITHL EPDPDDEREV LWFEQDLPVS TGQFRLGMNE NTKDCSLFSH VIHCKEGSNT GHLIVSPRKG ETWALFKNWD IIKWSSEPDS HSSYKYEIVE
201: ILSDHADGTG VSVAFLHKAK GFASVFFRMG TGDDADMIQI PSHSLYRFSH MIPSFKLTGT EAKDLPKDAY ELDQAALPAT TVQEKPVPSH IIPVPKPEAL
301: CLPSSEGKVI KTGQFWAFGG DYDDTPRYYG RIQKITVTQT FEQTAETKVH VCRLKATSFP QNVIKWKDKS MPVGCGTFSM LKNCSTLYPQ HLTHQIFPQT
401: SMDGNECTIL PKVGQLWVIY RLWAPHFGVG ALDEHCLDFD MVQVLDDAFN YKVLALEQVL VISEEKNKFF RAAKSRPSYC YDEDGPGVIF TIPQSKMLRF
501: SHPIPASRVT KEVDGEMIVL FEVDKKALPY GW
001: MNAQVGVAMG ISQNLEADNN SFLCDSGSAG AVPQKISGCA GLKFNDFDRL REGVKFEAGQ TWAIYNNTVD QMPRLYAQIR KVSAPCFSLR ITYLEPDPDG
101: EKETQWFEED LPVSVGKFRL GENKSTQDRS IFSHVIHCNE RSNTSCFSIT CRFIDTCHFS VSPRKGETWA LFKNWDIKWS SELDSHRKYE YEFVEILSDY
201: ADEAGVYVAY LHKAKGFASV FFRMGTGYEG IFRILPRSLY RFSHRVPSFK LTGDEGNGVA KDAYELDEAA LPETIEEFIM PSNSESETKS EHQAIYFASE
301: GKVFQTGQIW SFHSGYDDLP LYYGRIQKIT FTQAFKQDPV IKLHISRLKA TRFPEDVINW KYGGMPVGCG TFYARKVQEI ITPSEVSHQI MPQTSMDGIE
401: YTILPKIGEV WAIYRYWSRY IDVDRLEFGL YDIVEILDDT LDYKVQLLTQ QPVSDDRNDM EHRLFRACTE YTSNEDDGSE PIFTIPKTER IRFSNKVPAT
501: RVTKEMYGEL EDNSKVEFRA TPINVIHC
101: EKETQWFEED LPVSVGKFRL GENKSTQDRS IFSHVIHCNE RSNTSCFSIT CRFIDTCHFS VSPRKGETWA LFKNWDIKWS SELDSHRKYE YEFVEILSDY
201: ADEAGVYVAY LHKAKGFASV FFRMGTGYEG IFRILPRSLY RFSHRVPSFK LTGDEGNGVA KDAYELDEAA LPETIEEFIM PSNSESETKS EHQAIYFASE
301: GKVFQTGQIW SFHSGYDDLP LYYGRIQKIT FTQAFKQDPV IKLHISRLKA TRFPEDVINW KYGGMPVGCG TFYARKVQEI ITPSEVSHQI MPQTSMDGIE
401: YTILPKIGEV WAIYRYWSRY IDVDRLEFGL YDIVEILDDT LDYKVQLLTQ QPVSDDRNDM EHRLFRACTE YTSNEDDGSE PIFTIPKTER IRFSNKVPAT
501: RVTKEMYGEL EDNSKVEFRA TPINVIHC
Arabidopsis Description
CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609); BEST Arabidopsis thaliana protein match is: Domain of unknown function (DUF3444) (TAIR:AT5G18740.1); Has 30201 Blast hits to 17322 proteins in 780 /.../es: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). [Source:TAIR;Acc:AT5G18730]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.