Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2A01G084900.1 | Wheat | nucleus | 90.9 | 96.62 |
| TraesCS2B01G099600.2 | Wheat | nucleus | 94.63 | 94.8 |
| HORVU7Hr1G050080.1 | Barley | nucleus | 85.17 | 90.52 |
| Os11t0578100-00 | Rice | cytosol | 59.87 | 62.49 |
| Os11t0574200-00 | Rice | cytosol | 16.56 | 55.66 |
| EES09993 | Sorghum | nucleus | 52.59 | 52.4 |
| Zm00001d052947_P001 | Maize | plastid | 40.04 | 50.87 |
| KXG28768 | Sorghum | nucleus | 43.22 | 48.72 |
| TraesCS3D01G215900.1 | Wheat | nucleus | 44.68 | 47.95 |
| OQU83709 | Sorghum | cytosol | 44.22 | 41.82 |
| PGSC0003DMT400057888 | Potato | cytosol | 7.37 | 40.91 |
| Bra039476.1-P | Field mustard | cytosol | 7.28 | 38.84 |
| CDX74107 | Canola | cytosol | 8.92 | 36.57 |
| CDX74108 | Canola | cytosol | 6.64 | 36.14 |
| PGSC0003DMT400089411 | Potato | cytosol | 7.28 | 35.71 |
| Bra001194.1-P | Field mustard | cytosol | 6.55 | 35.64 |
| VIT_05s0020g02050.t01 | Wine grape | nucleus | 27.02 | 35.57 |
| Solyc01g067770.1.1 | Tomato | extracellular, vacuole | 8.55 | 34.43 |
| TraesCS6D01G155600.1 | Wheat | cytosol | 30.39 | 34.22 |
| CDY13919 | Canola | nucleus | 14.1 | 32.84 |
| CDX88917 | Canola | nucleus | 9.83 | 32.53 |
| Solyc01g067780.1.1 | Tomato | cytosol | 26.21 | 31.89 |
| PGSC0003DMT400058792 | Potato | nucleus | 26.39 | 31.62 |
| KRH50936 | Soybean | nucleus | 27.3 | 31.32 |
| CDX92582 | Canola | nucleus | 23.84 | 31.12 |
| KRH11282 | Soybean | nucleus | 27.39 | 31.09 |
| CDY08056 | Canola | nucleus | 17.65 | 30.89 |
| PGSC0003DMT400086601 | Potato | cytosol | 5.64 | 30.85 |
| KRH21004 | Soybean | nucleus | 26.93 | 30.58 |
| CDY24701 | Canola | nucleus | 16.2 | 30.22 |
| Solyc01g098250.2.1 | Tomato | nucleus | 27.21 | 30.11 |
| CDY13918 | Canola | nucleus | 15.65 | 30.02 |
| Bra006478.1-P | Field mustard | nucleus | 14.47 | 29.89 |
| KRH34004 | Soybean | cytosol | 8.64 | 29.87 |
| CDX88918 | Canola | cytosol | 14.29 | 29.51 |
| PGSC0003DMT400058788 | Potato | nucleus | 13.1 | 29.45 |
| Bra002183.1-P | Field mustard | nucleus | 15.1 | 29.23 |
| CDX70837 | Canola | mitochondrion | 13.38 | 29.17 |
| KRG92798 | Soybean | cytosol | 18.74 | 29.05 |
| CDX70843 | Canola | extracellular, golgi | 14.19 | 28.84 |
| PGSC0003DMT400057904 | Potato | nucleus | 27.93 | 28.4 |
| Solyc08g029220.1.1 | Tomato | nucleus | 20.38 | 28.39 |
| PGSC0003DMT400094016 | Potato | nucleus | 7.55 | 28.33 |
| Bra006479.1-P | Field mustard | cytosol | 14.19 | 28.26 |
| KRH02180 | Soybean | cytosol, nucleus, plastid | 26.84 | 28.26 |
| PGSC0003DMT400038431 | Potato | nucleus | 20.11 | 28.08 |
| Bra020757.1-P | Field mustard | nucleus | 16.65 | 28.02 |
| CDY05255 | Canola | nucleus | 16.56 | 27.49 |
| KRH34003 | Soybean | cytosol | 7.28 | 27.49 |
| VIT_14s0030g00640.t01 | Wine grape | nucleus | 29.21 | 27.46 |
| CDX99992 | Canola | cytosol | 23.2 | 27.1 |
| KRG96896 | Soybean | cytosol | 25.93 | 26.94 |
| CDX86172 | Canola | nucleus | 15.38 | 26.87 |
| Bra009972.1-P | Field mustard | nucleus | 15.38 | 26.87 |
| CDY19714 | Canola | nucleus | 23.38 | 26.72 |
| KRH68628 | Soybean | cytosol | 25.93 | 26.71 |
| TraesCS1D01G042900.1 | Wheat | nucleus | 28.48 | 26.26 |
| CDX80667 | Canola | nucleus | 15.83 | 26.17 |
| TraesCS2D01G077700.1 | Wheat | cytosol | 20.47 | 26.07 |
| Solyc10g007630.1.1 | Tomato | cytosol | 11.46 | 25.93 |
| CDX70840 | Canola | nucleus | 13.65 | 25.68 |
| Solyc01g098340.2.1 | Tomato | cytosol | 18.56 | 25.5 |
| Bra006476.1-P | Field mustard | nucleus | 13.56 | 25.34 |
| CDX88920 | Canola | nucleus | 13.56 | 25.34 |
| PGSC0003DMT400057893 | Potato | cytosol | 11.1 | 25.21 |
| CDY27809 | Canola | nucleus | 22.75 | 25.2 |
| PGSC0003DMT400054841 | Potato | cytosol | 11.28 | 25.1 |
| Solyc01g098310.1.1 | Tomato | cytosol | 10.37 | 25.0 |
| TraesCS3D01G434400.1 | Wheat | cytosol | 16.65 | 24.73 |
| AT5G37760.1 | Thale cress | cytosol | 4.64 | 24.64 |
| CDX88924 | Canola | plastid | 15.56 | 24.19 |
| Bra006473.1-P | Field mustard | plastid | 15.47 | 24.18 |
| TraesCS2D01G283100.2 | Wheat | cytosol | 16.01 | 24.01 |
| PGSC0003DMT400057887 | Potato | cytosol | 18.38 | 23.99 |
| PGSC0003DMT400057894 | Potato | cytosol | 8.46 | 23.97 |
| TraesCS3D01G541800.1 | Wheat | cytosol | 16.11 | 23.73 |
| CDX92586 | Canola | nucleus | 7.55 | 23.71 |
| Bra024236.1-P | Field mustard | nucleus | 7.73 | 23.1 |
| TraesCS4D01G315600.1 | Wheat | cytosol | 15.74 | 22.73 |
| AT4G19590.2 | Thale cress | nucleus | 7.73 | 22.73 |
| CDY41935 | Canola | cytosol | 10.92 | 22.56 |
| CDX92856 | Canola | nucleus | 9.55 | 22.34 |
| Bra039461.1-P | Field mustard | cytosol | 10.83 | 22.33 |
| CDY27796 | Canola | cytosol | 10.55 | 21.93 |
| CDY41919 | Canola | nucleus, plastid | 23.48 | 21.66 |
| Solyc01g098330.1.1 | Tomato | nucleus | 8.01 | 21.46 |
| TraesCS2D01G078000.1 | Wheat | cytosol | 12.37 | 21.15 |
| CDY29872 | Canola | cytosol | 8.46 | 20.85 |
| Bra039477.1-P | Field mustard | plastid | 10.1 | 20.63 |
| CDY27811 | Canola | nucleus | 7.83 | 17.95 |
| TraesCS5D01G508400.1 | Wheat | plastid | 5.28 | 16.25 |
| TraesCS2D01G077900.1 | Wheat | cytosol | 7.46 | 15.19 |
| CDX70844 | Canola | mitochondrion, plasma membrane | 11.28 | 14.52 |
| Bra002182.1-P | Field mustard | nucleus | 14.01 | 14.19 |
| CDY13917 | Canola | endoplasmic reticulum, extracellular, mitochondrion | 5.19 | 13.67 |
| Bra006477.1-P | Field mustard | cytosol | 16.2 | 12.95 |
| Bra039474.1-P | Field mustard | nucleus | 17.74 | 12.78 |
| CDX70841 | Canola | nucleus | 15.74 | 11.96 |
| CDY41917 | Canola | nucleus | 9.46 | 10.88 |
| CDX88919 | Canola | cytosol | 15.47 | 10.75 |
Protein Annotations
| EnsemblPlants:TraesCS2D01G082800.1 | EnsemblPlantsGene:TraesCS2D01G082800 | Gene3D:1.10.287.110 | InterPro:DUF3444 | InterPro:DnaJ_domain | InterPro:DnaJ_domain_CS |
| InterPro:IPR001623 | InterPro:IPR036869 | InterPro:J_dom_sf | PANTHER:PTHR10825 | PANTHER:PTHR10825:SF27 | PFAM:PF00226 |
| PFAM:PF11926 | PFscan:PS50076 | PRINTS:PR00625 | ScanProsite:PS00636 | SEG:seg | SMART:SM00271 |
| SUPFAM:SSF46565 | TIGR:cd06257 | MapMan:35.2 | : | : | : |
Description
No Description!
Coordinates
chr2D:+:35778681..35784944
Molecular Weight (calculated)
122472.0 Da
IEP (calculated)
6.479
GRAVY (calculated)
-0.606
Length
1099 amino acids
Sequence
(BLAST)
(BLAST)
0001: MMECNREEAS MARDIAAKKL EDKDFAGARK IALKAQMLFP ELENISQLLS VCTVHCAAEA RVNGEPDWYA ILQVEATTDH ANIRKQYLRL AFSLHPDKNC
0101: FPGAEAAFKL VAEAHSILCD QTKRSHYDIR RQYASRKVSK QATQQQKKSG TSKCDVPGHV QTFWTICAHC QMRYQYHNHA LNTLIRCLNC ENNFFAYKYN
0201: LQEQYAPPSS SVPTNSQVPT KTFPSQQGRR VKLSSAQETT GANPRMNVAQ GDGYMKGYSR PTMGEKASQS RTTSGQSQFS AMNQEKPAVP TANEHMGGWS
0301: IPDPPDPSII GRPKSGRADA SAASDAMNVP SQSRTTSGQS QFSAMNQEKP AVPTANEHMG GWSIPDPPDP SIIGRAKSGR ADASAASNAM NVPGPAKLSS
0401: TGVNTYAKIR INVAECDIKG HDNPSGEKEA NQSYITKGKV EIPAKTQSKS SAQTVNMNTG VFDRKNSGIE DASTVLNAAG SPVLRRSARR TQDADGSSSL
0501: NYNSKKKRRK NNCPSNADLN GKQIFDDNVT NVDRQSVPSD VSGKVDIQEE AKTPDIGDQD NIRAEVTDTV GQNQPCYSVK LSFPDAEFFD FEKLRDASLF
0601: ETGQIWALYD NLDGMPRYYA RIKSLDASNF KVHLTWLERI AMNEAEEKWS DEELPVACGS FSLGTTEISQ DRQMFSHIVS WTKGFKRRKY EVHPNKGEVW
0701: ALYKGWNMQW GSDADNHRSY EYEVVEVLSN FSVSAGVTVV PLVRIEGFVS LFMTVKDKSE IVVAPSELLR FSHSVPFYRT NGNEKVGVPG GFLELDTACL
0801: PIDLDAAFPC VSLHSCMSPG KKEGSTSIDL STDSASSRGE NEYISSEPKT SLQRNPDGPN SLGDFSEQNS PSLVYTYPDS EFYNFEECRS CEKFERGQIW
0901: ALYSDVDNFP KFYGWVSKVE LEPFKVYLTW LEACPQVEQE KQWLEQDIPV SCGKFKIRKW TTMYETNDTF SHLVCTGHDP NQQIEIVPQV GEIWVIYMNW
1001: TPDWTPSSPH ACGFEIGEII ERTEASTKVS LLTQVNGYTA VFKPGKRKRV VEIPTRHNLK FSHRVPSFCL TEENGGKLSG FYELDSASVP DVFLYKDAQ
0101: FPGAEAAFKL VAEAHSILCD QTKRSHYDIR RQYASRKVSK QATQQQKKSG TSKCDVPGHV QTFWTICAHC QMRYQYHNHA LNTLIRCLNC ENNFFAYKYN
0201: LQEQYAPPSS SVPTNSQVPT KTFPSQQGRR VKLSSAQETT GANPRMNVAQ GDGYMKGYSR PTMGEKASQS RTTSGQSQFS AMNQEKPAVP TANEHMGGWS
0301: IPDPPDPSII GRPKSGRADA SAASDAMNVP SQSRTTSGQS QFSAMNQEKP AVPTANEHMG GWSIPDPPDP SIIGRAKSGR ADASAASNAM NVPGPAKLSS
0401: TGVNTYAKIR INVAECDIKG HDNPSGEKEA NQSYITKGKV EIPAKTQSKS SAQTVNMNTG VFDRKNSGIE DASTVLNAAG SPVLRRSARR TQDADGSSSL
0501: NYNSKKKRRK NNCPSNADLN GKQIFDDNVT NVDRQSVPSD VSGKVDIQEE AKTPDIGDQD NIRAEVTDTV GQNQPCYSVK LSFPDAEFFD FEKLRDASLF
0601: ETGQIWALYD NLDGMPRYYA RIKSLDASNF KVHLTWLERI AMNEAEEKWS DEELPVACGS FSLGTTEISQ DRQMFSHIVS WTKGFKRRKY EVHPNKGEVW
0701: ALYKGWNMQW GSDADNHRSY EYEVVEVLSN FSVSAGVTVV PLVRIEGFVS LFMTVKDKSE IVVAPSELLR FSHSVPFYRT NGNEKVGVPG GFLELDTACL
0801: PIDLDAAFPC VSLHSCMSPG KKEGSTSIDL STDSASSRGE NEYISSEPKT SLQRNPDGPN SLGDFSEQNS PSLVYTYPDS EFYNFEECRS CEKFERGQIW
0901: ALYSDVDNFP KFYGWVSKVE LEPFKVYLTW LEACPQVEQE KQWLEQDIPV SCGKFKIRKW TTMYETNDTF SHLVCTGHDP NQQIEIVPQV GEIWVIYMNW
1001: TPDWTPSSPH ACGFEIGEII ERTEASTKVS LLTQVNGYTA VFKPGKRKRV VEIPTRHNLK FSHRVPSFCL TEENGGKLSG FYELDSASVP DVFLYKDAQ
001: MNAQVGVAMG ISQNLEADNN SFLCDSGSAG AVPQKISGCA GLKFNDFDRL REGVKFEAGQ TWAIYNNTVD QMPRLYAQIR KVSAPCFSLR ITYLEPDPDG
101: EKETQWFEED LPVSVGKFRL GENKSTQDRS IFSHVIHCNE RSNTSCFSIT CRFIDTCHFS VSPRKGETWA LFKNWDIKWS SELDSHRKYE YEFVEILSDY
201: ADEAGVYVAY LHKAKGFASV FFRMGTGYEG IFRILPRSLY RFSHRVPSFK LTGDEGNGVA KDAYELDEAA LPETIEEFIM PSNSESETKS EHQAIYFASE
301: GKVFQTGQIW SFHSGYDDLP LYYGRIQKIT FTQAFKQDPV IKLHISRLKA TRFPEDVINW KYGGMPVGCG TFYARKVQEI ITPSEVSHQI MPQTSMDGIE
401: YTILPKIGEV WAIYRYWSRY IDVDRLEFGL YDIVEILDDT LDYKVQLLTQ QPVSDDRNDM EHRLFRACTE YTSNEDDGSE PIFTIPKTER IRFSNKVPAT
501: RVTKEMYGEL EDNSKVEFRA TPINVIHC
101: EKETQWFEED LPVSVGKFRL GENKSTQDRS IFSHVIHCNE RSNTSCFSIT CRFIDTCHFS VSPRKGETWA LFKNWDIKWS SELDSHRKYE YEFVEILSDY
201: ADEAGVYVAY LHKAKGFASV FFRMGTGYEG IFRILPRSLY RFSHRVPSFK LTGDEGNGVA KDAYELDEAA LPETIEEFIM PSNSESETKS EHQAIYFASE
301: GKVFQTGQIW SFHSGYDDLP LYYGRIQKIT FTQAFKQDPV IKLHISRLKA TRFPEDVINW KYGGMPVGCG TFYARKVQEI ITPSEVSHQI MPQTSMDGIE
401: YTILPKIGEV WAIYRYWSRY IDVDRLEFGL YDIVEILDDT LDYKVQLLTQ QPVSDDRNDM EHRLFRACTE YTSNEDDGSE PIFTIPKTER IRFSNKVPAT
501: RVTKEMYGEL EDNSKVEFRA TPINVIHC
Arabidopsis Description
CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609); BEST Arabidopsis thaliana protein match is: Domain of unknown function (DUF3444) (TAIR:AT5G18740.1); Has 30201 Blast hits to 17322 proteins in 780 /.../es: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). [Source:TAIR;Acc:AT5G18730]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.