Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- extracellular 1
- cytosol 1
- golgi 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT4G19580.1 | Thale cress | cytosol | 35.03 | 41.99 |
| AT5G37750.1 | Thale cress | cytosol | 23.53 | 36.51 |
| AT5G37440.1 | Thale cress | cytosol | 24.33 | 31.71 |
| AT5G37760.1 | Thale cress | cytosol | 17.38 | 31.4 |
| AT5G62780.1 | Thale cress | cytosol | 13.64 | 24.64 |
| AT5G37380.6 | Thale cress | nucleus | 27.54 | 23.9 |
| AT5G53150.3 | Thale cress | cytosol | 43.05 | 21.32 |
| AT4G19570.1 | Thale cress | nucleus | 30.21 | 20.25 |
| AT3G06778.1 | Thale cress | cytosol | 10.43 | 17.03 |
| AT2G25560.1 | Thale cress | cytosol | 27.27 | 15.55 |
| AT3G06340.4 | Thale cress | cytosol | 24.87 | 13.82 |
| AT2G05250.1 | Thale cress | cytosol | 24.06 | 12.75 |
| AT2G05230.1 | Thale cress | cytosol | 24.06 | 12.75 |
| EES08665 | Sorghum | nucleus | 22.99 | 12.67 |
| AT2G35540.1 | Thale cress | nucleus | 17.65 | 11.19 |
| AT5G50115.1 | Thale cress | cytosol | 13.9 | 10.72 |
| AT5G18750.1 | Thale cress | nucleus | 24.33 | 10.29 |
| Os01t0375100-01 | Rice | nucleus | 26.47 | 9.82 |
| Zm00001d040846_P001 | Maize | cytosol | 24.33 | 9.72 |
| TraesCS4B01G101500.1 | Wheat | cytosol | 22.99 | 9.6 |
| HORVU4Hr1G043860.4 | Barley | cytosol | 23.8 | 9.38 |
| EES00793 | Sorghum | cytosol | 24.33 | 9.31 |
| EER88793 | Sorghum | cytosol | 22.73 | 8.97 |
| Os11t0573800-00 | Rice | nucleus | 21.93 | 8.93 |
| OQU83710 | Sorghum | cytosol | 23.26 | 8.93 |
| Os11t0578100-00 | Rice | cytosol | 24.87 | 8.83 |
| KXG28768 | Sorghum | nucleus | 22.99 | 8.82 |
| TraesCS3B01G244000.4 | Wheat | nucleus | 24.33 | 8.8 |
| TraesCS3A01G213800.3 | Wheat | nucleus | 24.06 | 8.8 |
| TraesCS3D01G215900.1 | Wheat | nucleus | 24.06 | 8.79 |
| AT3G04980.2 | Thale cress | nucleus | 26.74 | 8.45 |
| HORVU7Hr1G050080.1 | Barley | nucleus | 23.26 | 8.41 |
| HORVU3Hr1G051850.2 | Barley | nucleus | 24.6 | 8.13 |
| TraesCS2A01G084900.1 | Wheat | nucleus | 22.46 | 8.12 |
| AT5G27240.1 | Thale cress | nucleus | 23.8 | 8.06 |
| TraesCS2D01G082800.1 | Wheat | nucleus | 22.73 | 7.73 |
| TraesCS2B01G099600.2 | Wheat | nucleus | 22.46 | 7.66 |
| EES09993 | Sorghum | nucleus | 22.19 | 7.52 |
| AT3G04960.3 | Thale cress | cytosol | 12.03 | 7.44 |
| OQU83709 | Sorghum | cytosol | 22.73 | 7.31 |
| AT5G18740.1 | Thale cress | nucleus | 6.42 | 5.58 |
| AT3G05110.1 | Thale cress | nucleus | 4.28 | 4.3 |
| AT4G27980.2 | Thale cress | cytosol | 6.68 | 4.15 |
| OQU83714 | Sorghum | cytosol, nucleus, plastid | 8.82 | 3.12 |
| AT5G35753.1 | Thale cress | cytosol | 2.41 | 2.1 |
| TraesCS4A01G214500.1 | Wheat | nucleus | 3.21 | 1.79 |
| AT5G18730.1 | Thale cress | cytosol | 1.6 | 1.14 |
| Zm00001d052947_P001 | Maize | plastid | 1.6 | 0.69 |
| Os11t0574200-00 | Rice | cytosol | 0.27 | 0.31 |
| AT5G18720.3 | Thale cress | extracellular, golgi | 0.27 | 0.29 |
Protein Annotations
| Gene3D:1.10.287.110 | MapMan:35.2 | EntrezGene:827701 | UniProt:A0A1P8B3S0 | ProteinID:ANM66268.1 | ArrayExpress:AT4G19590 |
| EnsemblPlantsGene:AT4G19590 | RefSeq:AT4G19590 | TAIR:AT4G19590 | RefSeq:AT4G19590-TAIR-G | EnsemblPlants:AT4G19590.2 | Unigene:At.54412 |
| InterPro:DnaJ_domain | InterPro:IPR001623 | InterPro:IPR036869 | InterPro:J_dom_sf | RefSeq:NP_001328176.1 | PFAM:PF00226 |
| PRINTS:PR00625 | PFscan:PS50076 | PANTHER:PTHR44137 | SMART:SM00271 | SUPFAM:SSF46565 | SUPFAM:SSF81995 |
| UniParc:UPI0008492B7F | SEG:seg | : | : | : | : |
Description
Chaperone DnaJ-domain superfamily protein [Source:TAIR;Acc:AT4G19590]
Coordinates
chr4:+:10670589..10672554
Molecular Weight (calculated)
42616.2 Da
IEP (calculated)
9.891
GRAVY (calculated)
-1.183
Length
374 amino acids
Sequence
(BLAST)
(BLAST)
001: MECNKEEAIR AMDIAKRKVA ENDYNGAKLF ANKAQDLYPK LDGLRQVMML IDVYISAGNT ISGGESDWYG ILGVDPLADE EVVKKQYKRL ALLLHPDKNN
101: CEGAEGAFKL VLAAWCLLSD KVKRIAYDQK RKLNEVKPKR SRKQKQPPKK PPNQPKQQPN QQKQPPDQQK QPPNQPRQPP NQQKQPQNEP KQPPNQPKQP
201: PNQASTNGRA RSKKPTSKVS IFWTMCNKCE TQYEYVRVYY LNKTVLCRNC RGNFKATEIE KTPTEKEKTP TEKEETPQAT NKNTNGASSS CDRDSSLNVN
301: FDSSFRRDSS LSRMSYFNSG NVANQAEERG KREVRESEEE AGRGIANSDL KVEERVFKKL RTDNYAESSS EIKV
101: CEGAEGAFKL VLAAWCLLSD KVKRIAYDQK RKLNEVKPKR SRKQKQPPKK PPNQPKQQPN QQKQPPDQQK QPPNQPRQPP NQQKQPQNEP KQPPNQPKQP
201: PNQASTNGRA RSKKPTSKVS IFWTMCNKCE TQYEYVRVYY LNKTVLCRNC RGNFKATEIE KTPTEKEKTP TEKEETPQAT NKNTNGASSS CDRDSSLNVN
301: FDSSFRRDSS LSRMSYFNSG NVANQAEERG KREVRESEEE AGRGIANSDL KVEERVFKKL RTDNYAESSS EIKV
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.