Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 2
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT5G37750.1 | Thale cress | cytosol | 36.72 | 31.54 |
| AT5G37440.1 | Thale cress | cytosol | 38.65 | 27.87 |
| AT4G19580.1 | Thale cress | cytosol | 28.02 | 18.59 |
| AT4G19590.2 | Thale cress | nucleus | 31.4 | 17.38 |
| AT3G06778.1 | Thale cress | cytosol | 14.98 | 13.54 |
| AT5G37380.6 | Thale cress | nucleus | 26.09 | 12.53 |
| AT5G62780.1 | Thale cress | cytosol | 11.59 | 11.59 |
| AT4G19570.1 | Thale cress | nucleus | 29.95 | 11.11 |
| AT5G53150.3 | Thale cress | cytosol | 29.95 | 8.21 |
| AT2G25560.1 | Thale cress | cytosol | 25.12 | 7.93 |
| AT2G35540.1 | Thale cress | nucleus | 20.77 | 7.29 |
| AT3G06340.4 | Thale cress | cytosol | 21.74 | 6.69 |
| AT2G05230.1 | Thale cress | cytosol | 21.26 | 6.23 |
| AT2G05250.1 | Thale cress | cytosol | 21.26 | 6.23 |
| EES08665 | Sorghum | nucleus | 20.29 | 6.19 |
| AT5G50115.1 | Thale cress | cytosol | 14.01 | 5.98 |
| TraesCS4B01G101500.1 | Wheat | cytosol | 23.19 | 5.36 |
| Zm00001d040846_P001 | Maize | cytosol | 24.15 | 5.34 |
| AT5G18750.1 | Thale cress | nucleus | 22.71 | 5.32 |
| Os11t0573800-00 | Rice | nucleus | 23.19 | 5.23 |
| HORVU4Hr1G043860.4 | Barley | cytosol | 23.19 | 5.06 |
| OQU83710 | Sorghum | cytosol | 23.67 | 5.03 |
| TraesCS3A01G213800.3 | Wheat | nucleus | 24.15 | 4.89 |
| TraesCS3D01G215900.1 | Wheat | nucleus | 24.15 | 4.88 |
| Os11t0578100-00 | Rice | cytosol | 24.64 | 4.84 |
| TraesCS2A01G084900.1 | Wheat | nucleus | 24.15 | 4.84 |
| TraesCS3B01G244000.4 | Wheat | nucleus | 24.15 | 4.84 |
| AT3G04980.2 | Thale cress | nucleus | 27.54 | 4.82 |
| EES00793 | Sorghum | cytosol | 22.71 | 4.81 |
| HORVU7Hr1G050080.1 | Barley | nucleus | 23.67 | 4.74 |
| KXG28768 | Sorghum | nucleus | 22.22 | 4.72 |
| Os01t0375100-01 | Rice | nucleus | 22.71 | 4.66 |
| EER88793 | Sorghum | cytosol | 21.26 | 4.64 |
| TraesCS2D01G082800.1 | Wheat | nucleus | 24.64 | 4.64 |
| AT5G27240.1 | Thale cress | nucleus | 24.64 | 4.62 |
| TraesCS2B01G099600.2 | Wheat | nucleus | 24.15 | 4.56 |
| HORVU3Hr1G051850.2 | Barley | nucleus | 24.15 | 4.42 |
| OQU83709 | Sorghum | cytosol | 24.64 | 4.39 |
| AT5G18740.1 | Thale cress | nucleus | 8.7 | 4.19 |
| EES09993 | Sorghum | nucleus | 22.22 | 4.17 |
| AT3G04960.3 | Thale cress | cytosol | 9.66 | 3.31 |
| AT4G27980.2 | Thale cress | cytosol | 6.28 | 2.16 |
| OQU83714 | Sorghum | cytosol, nucleus, plastid | 10.63 | 2.08 |
| AT3G05110.1 | Thale cress | nucleus | 2.9 | 1.61 |
| AT5G18730.1 | Thale cress | cytosol | 2.42 | 0.95 |
| AT5G35753.1 | Thale cress | cytosol | 1.93 | 0.93 |
| Os11t0574200-00 | Rice | cytosol | 1.45 | 0.92 |
| AT5G18720.3 | Thale cress | extracellular, golgi | 1.45 | 0.88 |
| TraesCS4A01G214500.1 | Wheat | nucleus | 1.93 | 0.6 |
| Zm00001d052947_P001 | Maize | plastid | 1.45 | 0.35 |
Protein Annotations
| Gene3D:1.10.287.110 | MapMan:35.2 | EntrezGene:833754 | ProteinID:AED94228.1 | ArrayExpress:AT5G37760 | EnsemblPlantsGene:AT5G37760 |
| RefSeq:AT5G37760 | TAIR:AT5G37760 | RefSeq:AT5G37760-TAIR-G | EnsemblPlants:AT5G37760.1 | TAIR:AT5G37760.1 | Unigene:At.55194 |
| InterPro:DnaJ_domain | UniProt:F4K8L9 | InterPro:IPR001623 | InterPro:IPR036869 | InterPro:J_dom_sf | RefSeq:NP_198592.1 |
| PFAM:PF00226 | PRINTS:PR00625 | PFscan:PS50076 | PANTHER:PTHR44137 | SMART:SM00271 | SUPFAM:SSF46565 |
| UniParc:UPI000016277C | SEG:seg | : | : | : | : |
Description
Chaperone DnaJ-domain superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4K8L9]
Coordinates
chr5:+:14997168..14998236
Molecular Weight (calculated)
23839.8 Da
IEP (calculated)
10.132
GRAVY (calculated)
-0.659
Length
207 amino acids
Sequence
(BLAST)
(BLAST)
001: MVKTCLINFT SALTSSEDHG RRHIAPLIGV DGIFLKCTLK VENEKKWLWF IQMVKSDFDL KDRDGFIITS DRPKLFPMEI AERKLSENDY NGAKKFINKA
101: QNLYPKLDGL KTSVDDDQLK KQYKKLALLL HPDKYNLNGA EGAFKPVTEA WCMLSDKVKR TSYDQRRISK EAKTEIQKQP NPQNIGARSN KLASWIKKQL
201: NPTIYTS
101: QNLYPKLDGL KTSVDDDQLK KQYKKLALLL HPDKYNLNGA EGAFKPVTEA WCMLSDKVKR TSYDQRRISK EAKTEIQKQP NPQNIGARSN KLASWIKKQL
201: NPTIYTS
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.