Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||
|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4B01G101500.1 | Wheat | cytosol | 83.25 | 88.17 |
| TraesCS4A01G214500.1 | Wheat | nucleus | 61.12 | 86.57 |
| OQU83710 | Sorghum | cytosol | 49.42 | 48.15 |
| HORVU7Hr1G050080.1 | Barley | nucleus | 47.1 | 43.23 |
| Os11t0573800-00 | Rice | nucleus | 41.62 | 43.03 |
| HORVU3Hr1G051850.2 | Barley | nucleus | 46.58 | 39.08 |
| CDX74107 | Canola | cytosol | 10.43 | 36.94 |
| PGSC0003DMT400057888 | Potato | cytosol | 7.69 | 36.87 |
| Bra039476.1-P | Field mustard | cytosol | 7.69 | 35.44 |
| PGSC0003DMT400089411 | Potato | cytosol | 8.32 | 35.27 |
| Solyc01g067770.1.1 | Tomato | extracellular, vacuole | 10.12 | 35.16 |
| OQU83714 | Sorghum | cytosol, nucleus, plastid | 38.15 | 34.28 |
| Bra001194.1-P | Field mustard | cytosol | 7.27 | 34.16 |
| CDX74108 | Canola | cytosol | 7.27 | 34.16 |
| VIT_05s0020g02050.t01 | Wine grape | nucleus | 28.87 | 32.81 |
| PGSC0003DMT400094016 | Potato | nucleus | 10.12 | 32.76 |
| CDY13919 | Canola | nucleus | 15.7 | 31.57 |
| PGSC0003DMT400058792 | Potato | nucleus | 30.14 | 31.19 |
| CDY24701 | Canola | nucleus | 19.28 | 31.07 |
| PGSC0003DMT400058788 | Potato | nucleus | 15.91 | 30.88 |
| CDY08056 | Canola | nucleus | 20.34 | 30.73 |
| Solyc01g067780.1.1 | Tomato | cytosol | 28.98 | 30.45 |
| CDX88917 | Canola | nucleus | 10.64 | 30.42 |
| HORVU6Hr1G033850.1 | Barley | cytosol | 30.87 | 30.05 |
| KRH11282 | Soybean | nucleus | 30.56 | 29.96 |
| CDX92582 | Canola | nucleus | 26.55 | 29.93 |
| KRH50936 | Soybean | nucleus | 30.03 | 29.75 |
| PGSC0003DMT400086601 | Potato | cytosol | 6.22 | 29.35 |
| KRH21004 | Soybean | nucleus | 29.82 | 29.24 |
| Bra020757.1-P | Field mustard | nucleus | 19.6 | 28.48 |
| CDY13918 | Canola | nucleus | 16.97 | 28.1 |
| Bra002183.1-P | Field mustard | nucleus | 16.75 | 27.99 |
| KRH34004 | Soybean | cytosol | 9.38 | 27.99 |
| KRH34003 | Soybean | cytosol | 8.54 | 27.84 |
| HORVU1Hr1G001860.1 | Barley | nucleus | 12.86 | 27.73 |
| CDY05255 | Canola | nucleus | 19.28 | 27.64 |
| CDX70837 | Canola | mitochondrion | 14.54 | 27.38 |
| Solyc01g098250.2.1 | Tomato | nucleus | 28.45 | 27.19 |
| Bra009972.1-P | Field mustard | nucleus | 18.02 | 27.19 |
| CDX86172 | Canola | nucleus | 18.02 | 27.19 |
| Solyc08g029220.1.1 | Tomato | nucleus | 22.55 | 27.12 |
| KRG92798 | Soybean | cytosol | 20.13 | 26.94 |
| KRH02180 | Soybean | cytosol, nucleus, plastid | 29.61 | 26.92 |
| PGSC0003DMT400038431 | Potato | nucleus | 22.23 | 26.81 |
| CDX88918 | Canola | cytosol | 14.96 | 26.69 |
| Bra006478.1-P | Field mustard | nucleus | 14.96 | 26.69 |
| CDX99992 | Canola | cytosol | 26.13 | 26.35 |
| CDY19714 | Canola | nucleus | 26.45 | 26.09 |
| Bra006479.1-P | Field mustard | cytosol | 15.17 | 26.09 |
| CDX70843 | Canola | extracellular, golgi | 14.75 | 25.88 |
| CDX80667 | Canola | nucleus | 18.12 | 25.86 |
| PGSC0003DMT400057904 | Potato | nucleus | 29.29 | 25.72 |
| PGSC0003DMT400057894 | Potato | cytosol | 10.43 | 25.52 |
| Solyc10g007630.1.1 | Tomato | cytosol | 13.07 | 25.51 |
| PGSC0003DMT400057893 | Potato | cytosol | 12.96 | 25.41 |
| CDX70840 | Canola | nucleus | 15.6 | 25.34 |
| Bra006476.1-P | Field mustard | nucleus | 15.6 | 25.17 |
| CDX88920 | Canola | nucleus | 15.6 | 25.17 |
| PGSC0003DMT400054841 | Potato | cytosol | 13.07 | 25.1 |
| HORVU2Hr1G084660.1 | Barley | cytosol | 22.97 | 25.06 |
| HORVU2Hr1G070040.6 | Barley | cytosol | 19.39 | 24.97 |
| VIT_14s0030g00640.t01 | Wine grape | nucleus | 30.56 | 24.81 |
| KRG96896 | Soybean | cytosol | 27.61 | 24.76 |
| HORVU1Hr1G008940.2 | Barley | nucleus | 31.19 | 24.71 |
| KRH68628 | Soybean | cytosol | 27.61 | 24.55 |
| HORVU2Hr1G013270.2 | Barley | cytosol | 22.23 | 24.28 |
| CDY27809 | Canola | nucleus | 25.29 | 24.19 |
| Solyc01g098340.2.1 | Tomato | cytosol | 20.34 | 24.12 |
| CDX92586 | Canola | nucleus | 8.85 | 24.0 |
| AT4G19590.2 | Thale cress | nucleus | 9.38 | 23.8 |
| Bra006473.1-P | Field mustard | plastid | 17.39 | 23.47 |
| CDX88924 | Canola | plastid | 17.39 | 23.34 |
| Solyc01g098310.1.1 | Tomato | cytosol | 11.17 | 23.25 |
| AT5G37760.1 | Thale cress | cytosol | 5.06 | 23.19 |
| CDY41935 | Canola | cytosol | 12.86 | 22.93 |
| HORVU3Hr1G096340.2 | Barley | cytosol | 18.02 | 22.86 |
| HORVU3Hr1G117190.1 | Barley | cytosol | 18.34 | 22.83 |
| HORVU7Hr1G005730.1 | Barley | cytosol | 10.75 | 22.82 |
| HORVU4Hr1G083260.1 | Barley | cytosol | 18.34 | 22.8 |
| PGSC0003DMT400057887 | Potato | cytosol | 20.02 | 22.57 |
| Bra024236.1-P | Field mustard | nucleus | 8.64 | 22.28 |
| Bra039461.1-P | Field mustard | cytosol | 12.33 | 21.95 |
| CDY27796 | Canola | cytosol | 12.22 | 21.93 |
| CDY41919 | Canola | nucleus, plastid | 26.13 | 20.82 |
| HORVU5Hr1G116070.3 | Barley | cytosol | 5.58 | 20.7 |
| CDX92856 | Canola | nucleus | 9.8 | 19.79 |
| CDY29872 | Canola | cytosol | 9.27 | 19.73 |
| Solyc01g098330.1.1 | Tomato | nucleus | 8.22 | 19.02 |
| Bra039477.1-P | Field mustard | plastid | 10.75 | 18.96 |
| CDY27811 | Canola | nucleus | 8.85 | 17.54 |
| HORVU3Hr1G095280.1 | Barley | nucleus | 8.64 | 16.4 |
| CDY13917 | Canola | endoplasmic reticulum, extracellular, mitochondrion | 6.22 | 14.15 |
| Bra002182.1-P | Field mustard | nucleus | 16.02 | 14.01 |
| CDX70844 | Canola | mitochondrion, plasma membrane | 12.22 | 13.58 |
| Bra006477.1-P | Field mustard | cytosol | 18.02 | 12.44 |
| CDX70841 | Canola | nucleus | 17.91 | 11.75 |
| Bra039474.1-P | Field mustard | nucleus | 18.65 | 11.6 |
| CDX88919 | Canola | cytosol | 17.28 | 10.37 |
| CDY41917 | Canola | nucleus | 10.43 | 10.36 |
Protein Annotations
| EnsemblPlants:HORVU4Hr1G043860.4 | EnsemblPlantsGene:HORVU4Hr1G043860 | Gene3D:1.10.287.110 | InterPro:DUF3444 | InterPro:DnaJ_domain | InterPro:IPR001623 |
| InterPro:IPR036869 | InterPro:J_dom_sf | PANTHER:PTHR10825 | PANTHER:PTHR10825:SF38 | PFAM:PF00226 | PFAM:PF11926 |
| PFscan:PS50076 | PRINTS:PR00625 | SMART:SM00271 | SUPFAM:SSF46565 | UniParc:UPI000B461B3D | UniProt:A0A287NW41 |
| MapMan:35.2 | : | : | : | : | : |
Description
No Description!
Coordinates
chrchr4H:-:349748861..349760269
Molecular Weight (calculated)
107104.0 Da
IEP (calculated)
7.194
GRAVY (calculated)
-0.538
Length
949 amino acids
Sequence
(BLAST)
(BLAST)
001: MECNREEALR AREIAVKMLE NKDFLGARRI ALKAQRLFPG FENIHQLLTV CEVHCAAVAK INGDLDWYRI LQVEATADET VITKQYDKLA FWLHPDKNTL
101: SGAEVALKLV SEARKILSDR TERSLYDIRR QYASKHVTSK ASHVPNKTGG NISHVNGCKQ PPALVVVFWT ICPHCRRRFV YYKKNFLVIC DNCGKLFFAF
201: KLHEQTTPSS FLSYSANNAE VSPGKISCQQ HGVTNQQAQT GGNIDSEPTM NVARIDEHTE RDDRASGDEE GNRSETRSDV VQFSAMNQAK SSVPAADKVS
301: VSNLRSTHPD PNLISTQNED ASLVPNIARS SSLQRLGKRK QDDGTDCSHG TGSSNYKRQR NHDLPSSASE QMSNDNAAVA ENQSAEHHAL SRVDSQDGVI
401: ASHEANQQSY KEASGSAPQK PGSPVIAYNH PDFFDFGKIR DVNLIAVDQI WALYDNLDGM PRVYAQVKRI DTSDFRVQLT WLEYNPRNEQ EANWNNKELP
501: VSCGSFCLGG ETNLLQDPSI YLSHRVPLTK GKNGNSYEIN PNKGEVWALY KRWSMQWISD ADNCRSYGYD LVEVISDGST SGDVIVSPLM RIEGFVSLFA
601: QAKDKCFFLI PSSELLRFSH CIPFYRTNGN ERVGVAEGFL ELDTAALPSD LERAFPSSTL GSYMSSEFIS YPYPESEFHN FEEDRSCEKF ENGQIWAIYN
701: DADTFPNVYG WVRKVETQPF EVHLTWLQAC PQQAQEKLWL GQNVPVSCGK FEIRSWEDKY GGNHSFSDLV ENSQINMNWQ VKIHPKVDEV WAIHKNWSPD
801: WVPSSNKHTT HYAIGEIVEC SKRSTLLSFL TKVDGYVAVF KPDPIKEVLK IPRKENLRFS HRIPSFRLTE EKGGXGGDLC TTKRTFWSSV ITVVNCSLHS
901: SCMSRQRPRV SYLIQQIMLK FHLGRFHVNN MASPISRPRQ GGTLTRNLP
101: SGAEVALKLV SEARKILSDR TERSLYDIRR QYASKHVTSK ASHVPNKTGG NISHVNGCKQ PPALVVVFWT ICPHCRRRFV YYKKNFLVIC DNCGKLFFAF
201: KLHEQTTPSS FLSYSANNAE VSPGKISCQQ HGVTNQQAQT GGNIDSEPTM NVARIDEHTE RDDRASGDEE GNRSETRSDV VQFSAMNQAK SSVPAADKVS
301: VSNLRSTHPD PNLISTQNED ASLVPNIARS SSLQRLGKRK QDDGTDCSHG TGSSNYKRQR NHDLPSSASE QMSNDNAAVA ENQSAEHHAL SRVDSQDGVI
401: ASHEANQQSY KEASGSAPQK PGSPVIAYNH PDFFDFGKIR DVNLIAVDQI WALYDNLDGM PRVYAQVKRI DTSDFRVQLT WLEYNPRNEQ EANWNNKELP
501: VSCGSFCLGG ETNLLQDPSI YLSHRVPLTK GKNGNSYEIN PNKGEVWALY KRWSMQWISD ADNCRSYGYD LVEVISDGST SGDVIVSPLM RIEGFVSLFA
601: QAKDKCFFLI PSSELLRFSH CIPFYRTNGN ERVGVAEGFL ELDTAALPSD LERAFPSSTL GSYMSSEFIS YPYPESEFHN FEEDRSCEKF ENGQIWAIYN
701: DADTFPNVYG WVRKVETQPF EVHLTWLQAC PQQAQEKLWL GQNVPVSCGK FEIRSWEDKY GGNHSFSDLV ENSQINMNWQ VKIHPKVDEV WAIHKNWSPD
801: WVPSSNKHTT HYAIGEIVEC SKRSTLLSFL TKVDGYVAVF KPDPIKEVLK IPRKENLRFS HRIPSFRLTE EKGGXGGDLC TTKRTFWSSV ITVVNCSLHS
901: SCMSRQRPRV SYLIQQIMLK FHLGRFHVNN MASPISRPRQ GGTLTRNLP
001: MNAQVGVAMG ISQNLEADNN SFLCDSGSAG AVPQKISGCA GLKFNDFDRL REGVKFEAGQ TWAIYNNTVD QMPRLYAQIR KVSAPCFSLR ITYLEPDPDG
101: EKETQWFEED LPVSVGKFRL GENKSTQDRS IFSHVIHCNE RSNTSCFSIT CRFIDTCHFS VSPRKGETWA LFKNWDIKWS SELDSHRKYE YEFVEILSDY
201: ADEAGVYVAY LHKAKGFASV FFRMGTGYEG IFRILPRSLY RFSHRVPSFK LTGDEGNGVA KDAYELDEAA LPETIEEFIM PSNSESETKS EHQAIYFASE
301: GKVFQTGQIW SFHSGYDDLP LYYGRIQKIT FTQAFKQDPV IKLHISRLKA TRFPEDVINW KYGGMPVGCG TFYARKVQEI ITPSEVSHQI MPQTSMDGIE
401: YTILPKIGEV WAIYRYWSRY IDVDRLEFGL YDIVEILDDT LDYKVQLLTQ QPVSDDRNDM EHRLFRACTE YTSNEDDGSE PIFTIPKTER IRFSNKVPAT
501: RVTKEMYGEL EDNSKVEFRA TPINVIHC
101: EKETQWFEED LPVSVGKFRL GENKSTQDRS IFSHVIHCNE RSNTSCFSIT CRFIDTCHFS VSPRKGETWA LFKNWDIKWS SELDSHRKYE YEFVEILSDY
201: ADEAGVYVAY LHKAKGFASV FFRMGTGYEG IFRILPRSLY RFSHRVPSFK LTGDEGNGVA KDAYELDEAA LPETIEEFIM PSNSESETKS EHQAIYFASE
301: GKVFQTGQIW SFHSGYDDLP LYYGRIQKIT FTQAFKQDPV IKLHISRLKA TRFPEDVINW KYGGMPVGCG TFYARKVQEI ITPSEVSHQI MPQTSMDGIE
401: YTILPKIGEV WAIYRYWSRY IDVDRLEFGL YDIVEILDDT LDYKVQLLTQ QPVSDDRNDM EHRLFRACTE YTSNEDDGSE PIFTIPKTER IRFSNKVPAT
501: RVTKEMYGEL EDNSKVEFRA TPINVIHC
Arabidopsis Description
CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609); BEST Arabidopsis thaliana protein match is: Domain of unknown function (DUF3444) (TAIR:AT5G18740.1); Has 30201 Blast hits to 17322 proteins in 780 /.../es: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). [Source:TAIR;Acc:AT5G18730]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.