Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3B01G470100.1 | Wheat | nucleus | 91.8 | 63.22 |
| TraesCS3A01G435100.1 | Wheat | nucleus | 91.4 | 57.77 |
| Os01t0923800-01 | Rice | nucleus | 43.8 | 29.44 |
| Zm00001d011997_P001 | Maize | nucleus | 45.0 | 27.37 |
| KXG34016 | Sorghum | nucleus | 45.2 | 27.26 |
| HORVU3Hr1G117190.1 | Barley | cytosol | 28.2 | 18.5 |
| HORVU4Hr1G083260.1 | Barley | cytosol | 28.2 | 18.48 |
| HORVU2Hr1G070040.6 | Barley | cytosol | 25.6 | 17.37 |
| HORVU1Hr1G001860.1 | Barley | nucleus | 14.0 | 15.91 |
| HORVU7Hr1G005730.1 | Barley | cytosol | 12.6 | 14.09 |
| HORVU5Hr1G116070.3 | Barley | cytosol | 5.6 | 10.94 |
| HORVU4Hr1G043860.4 | Barley | cytosol | 16.4 | 8.64 |
| HORVU6Hr1G033850.1 | Barley | cytosol | 16.8 | 8.62 |
| HORVU7Hr1G050080.1 | Barley | nucleus | 16.8 | 8.12 |
| HORVU3Hr1G051850.2 | Barley | nucleus | 17.0 | 7.52 |
| HORVU1Hr1G008940.2 | Barley | nucleus | 16.0 | 6.68 |
| HORVU2Hr1G084660.1 | Barley | cytosol | 11.0 | 6.32 |
| HORVU3Hr1G096340.2 | Barley | cytosol | 9.4 | 6.28 |
| HORVU2Hr1G013270.2 | Barley | cytosol | 10.4 | 5.98 |
Protein Annotations
| EnsemblPlants:HORVU3Hr1G095280.1 | EnsemblPlantsGene:HORVU3Hr1G095280 | Gene3D:1.10.287.110 | InterPro:DUF3444 | InterPro:DnaJ_domain | InterPro:IPR001623 |
| InterPro:IPR036869 | InterPro:J_dom_sf | ncoils:Coil | PANTHER:PTHR44137 | PANTHER:PTHR44137:SF5 | PFAM:PF00226 |
| PFAM:PF11926 | PFscan:PS50076 | PRINTS:PR00625 | SEG:seg | SMART:SM00271 | SUPFAM:SSF46565 |
| UniParc:UPI000B478E36 | UniProt:A0A287MDK0 | MapMan:35.2 | : | : | : |
Description
No Description!
Coordinates
chrchr3H:+:649507033..649508534
Molecular Weight (calculated)
55872.7 Da
IEP (calculated)
10.268
GRAVY (calculated)
-0.966
Length
500 amino acids
Sequence
(BLAST)
(BLAST)
001: RKQYKKLALQ THPDKNSFVG ADSAFNLISD AWNVLSDKNK RILHDQRRHM SSLRVLQNNS QVSVDNTSSS SMPSMNGFCR QNTGPASPPN VPPHNMPKLS
101: TFWTVCISCR INFEYPRQYV NQYMICAECH KPFMAEEVPP PPTSSHTYQP KSMDTKTSRV RRAGPGEGMA GTGVASGSRN HHNPMQQHCS FQGSAVGAHT
201: SAHPVQKTHG TVSGSSGSSI PRKAAATKEK EAAKKRYKKV APQSTSSGLG GDSSSQNKAK RKARSTDQAP GAKRRKETSN CHVSAGSTFI KEMEKLDMRS
301: LLINKMKLQL GDKLEEFNRK KADMENRQKM QASQRTNKAA TCSTSVDAKK MKRTQGSSSV RPEGDNGKEL TSERKRAEKR KHADSEEMGS WKWKKPEIRL
401: YYTRRSRREQ EPSPDEMLVP DADFCTFGDH SGSSFQEDQV WATYDEEDGM PRYYALIQTV LSRRPFKVTF AFLKADNPDE FGASGWLSCG FSKTCGDFKP
101: TFWTVCISCR INFEYPRQYV NQYMICAECH KPFMAEEVPP PPTSSHTYQP KSMDTKTSRV RRAGPGEGMA GTGVASGSRN HHNPMQQHCS FQGSAVGAHT
201: SAHPVQKTHG TVSGSSGSSI PRKAAATKEK EAAKKRYKKV APQSTSSGLG GDSSSQNKAK RKARSTDQAP GAKRRKETSN CHVSAGSTFI KEMEKLDMRS
301: LLINKMKLQL GDKLEEFNRK KADMENRQKM QASQRTNKAA TCSTSVDAKK MKRTQGSSSV RPEGDNGKEL TSERKRAEKR KHADSEEMGS WKWKKPEIRL
401: YYTRRSRREQ EPSPDEMLVP DADFCTFGDH SGSSFQEDQV WATYDEEDGM PRYYALIQTV LSRRPFKVTF AFLKADNPDE FGASGWLSCG FSKTCGDFKP
001: MECNKDEAKR AMDIAERKMT EKDYTGAKKF ANKAQNLFPE LDGLKQLFVA INVYISGEKT FAGEADWYGV LGVDPFASDE ALKKQYRKLV LMLHPDKNKC
101: KGAEGAFNLV AEAWALLSDK DKRILYNVKR GKDVKAAQQR FPTTQREIPS HQPTSNGIPN VREHVVSSAR ARYKPATRKP AARMDRSRTG SPAFVYPTQE
201: SSTFWTMCNK CDTQYEYQRV YLNQTLLCPH CHHGFVAEEK TPPTNIPKPP VNISSNQHHR SSKNQASNKN SNGSSYRREP ATSVNHNFQW DSSRMGGSYS
301: RNATNETANV VQQGQDKLKR VFWETQEREA ARGFTNSDLG NFKRQKTDDS HMRGPSAGSR HPYVQALLRS DIKKALMDRG QSEIFKRLPM MIAKMEGKVN
401: PTEGEKNSTK AMSSKASEVE RSKMSSTANE VERSVEVIPH ESDEVKEIVV PDSDFHNFDL DRSESAFKDD QIWAAYDDAD GMPRFYARIQ KVISVNPFKL
501: KISWLNSKTT SEFGPIDWMG AGFAKSCGDF RCGRYESTDT LNAFSHSVDF TKGARGLLHI LPKKGQVWAL YRNWSPEWDK NTPDEVKHKY EMVEVLDDYT
601: EDDQSLTVAL LLKAEGFRVV FRRCTEKLGV RKIAKEEMLR FSHQVPHYIL TGKEADNAPE GFLELDPAAT PCAFSSENAE ADEKSEAVKE NEQGEAVKEN
701: EESEALKENE ESEAVKENEE VGMDLD
101: KGAEGAFNLV AEAWALLSDK DKRILYNVKR GKDVKAAQQR FPTTQREIPS HQPTSNGIPN VREHVVSSAR ARYKPATRKP AARMDRSRTG SPAFVYPTQE
201: SSTFWTMCNK CDTQYEYQRV YLNQTLLCPH CHHGFVAEEK TPPTNIPKPP VNISSNQHHR SSKNQASNKN SNGSSYRREP ATSVNHNFQW DSSRMGGSYS
301: RNATNETANV VQQGQDKLKR VFWETQEREA ARGFTNSDLG NFKRQKTDDS HMRGPSAGSR HPYVQALLRS DIKKALMDRG QSEIFKRLPM MIAKMEGKVN
401: PTEGEKNSTK AMSSKASEVE RSKMSSTANE VERSVEVIPH ESDEVKEIVV PDSDFHNFDL DRSESAFKDD QIWAAYDDAD GMPRFYARIQ KVISVNPFKL
501: KISWLNSKTT SEFGPIDWMG AGFAKSCGDF RCGRYESTDT LNAFSHSVDF TKGARGLLHI LPKKGQVWAL YRNWSPEWDK NTPDEVKHKY EMVEVLDDYT
601: EDDQSLTVAL LLKAEGFRVV FRRCTEKLGV RKIAKEEMLR FSHQVPHYIL TGKEADNAPE GFLELDPAAT PCAFSSENAE ADEKSEAVKE NEQGEAVKEN
701: EESEALKENE ESEAVKENEE VGMDLD
Arabidopsis Description
DnaJ heat shock amino-terminal domain protein [Source:UniProtKB/TrEMBL;Acc:Q9FGM2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.