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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 3
  • cytosol 3
  • endoplasmic reticulum 1
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS3B01G607500.1 Wheat cytosol 85.43 87.74
TraesCS3A01G536400.1 Wheat cytosol 85.43 87.74
TraesCS3D01G541800.1 Wheat cytosol 85.3 87.13
HORVU4Hr1G083260.1 Barley cytosol 74.02 73.92
Os03t0401200-01 Rice cytosol 66.93 68.18
EES07899 Sorghum cytosol 62.99 65.31
Zm00001d025585_P001 Maize cytosol 61.42 63.85
Zm00001d025584_P001 Maize cytosol 61.42 63.85
EES10933 Sorghum cytosol 58.53 61.6
HORVU1Hr1G001860.1 Barley nucleus 24.54 42.5
HORVU2Hr1G070040.6 Barley cytosol 36.22 37.45
HORVU7Hr1G005730.1 Barley cytosol 16.8 28.64
HORVU3Hr1G095280.1 Barley nucleus 18.5 28.2
HORVU5Hr1G116070.3 Barley cytosol 6.3 18.75
HORVU6Hr1G033850.1 Barley cytosol 23.75 18.56
HORVU4Hr1G043860.4 Barley cytosol 22.83 18.34
HORVU7Hr1G050080.1 Barley nucleus 22.83 16.83
HORVU1Hr1G008940.2 Barley nucleus 25.2 16.03
HORVU3Hr1G051850.2 Barley nucleus 23.62 15.92
HORVU3Hr1G096340.2 Barley cytosol 14.04 14.3
HORVU2Hr1G013270.2 Barley cytosol 14.04 12.31
HORVU2Hr1G084660.1 Barley cytosol 13.91 12.18
Protein Annotations
EnsemblPlants:HORVU3Hr1G117190.1EnsemblPlantsGene:HORVU3Hr1G117190Gene3D:1.10.287.110InterPro:DUF3444InterPro:DnaJ_domainInterPro:IPR001623
InterPro:IPR036869InterPro:J_dom_sfncoils:CoilPANTHER:PTHR44137PANTHER:PTHR44137:SF4PFAM:PF00226
PFAM:PF11926PFscan:PS50076PRINTS:PR00625SEG:segSMART:SM00271SUPFAM:SSF46565
UniParc:UPI0002950F7EUniProt:M0UJ01MapMan:35.2:::
Description
No Description!
Coordinates
chrchr3H:-:697569825..697575149
Molecular Weight (calculated)
85105.9 Da
IEP (calculated)
8.753
GRAVY (calculated)
-0.708
Length
762 amino acids
Sequence
(BLAST)
001: MECNKDEALR AKQIAERKFE SKDLQGAKKF ALKAKSLFPD LEGIMQMIIT LDVYLTSELK VAGDRDWYSI LSVDTSADDE TVRKQYRKLA LLLHPDKNKS
101: VGAEGAFQLV KEAWTVLSDK TKRLLYDQKR KVVVLQQRTA QSNRTRTTPG AANGFENFAA KSPPFQPRAN KPKTGSSTSA VRQRPPPPPK RPPPHYQAPA
201: PAPPPATKST FWTSCNKCKM NFEYLKVYID HTLLCPSCRE PFLAKEVAVP PTEDVHAVRN SNVSGAPQDA STGRNYQWGP FSRAAGAASA TASSSAAAQA
301: ANMVHQTYEK VKREREEAQA VARREEALQR KQNPLKRPAD VSMNYGMGGS AFGKKMRTDA GGGSSSIPAG PWAQFARMPG GTIPFSTNTG GFEFHIINGV
401: PTWRPKPPTR ISVTKTFSQQ DLRRILIAKM KSDLREKLNE IRSRPPQVTV DVPVSKKHVE RSKATVDSTA RQTSKKHAEG SSKASDDSTA NNDDCADPEE
501: NGSANSTATE NGDEDPLSFT VPDPDFHDFD EDRTEERFQS DQIWASYDDD DGMPRFYAFI QKIISLNPFK VKISYLETKT NSEFGSLSWV SSGFTKTCGD
601: FRIAKHRICD VVNMFSHQIK WEKGPRGVVK VYPREGDIWA LYQNWSPEWD EDTPTNVLHV YDLVEILDDY DEDQGISVIP LVKVTGFRTV FQRHQNRDVI
701: KRIPKGEMFR FSHQVPFYKL SGEEAPNVPK DSYEVDPAAI SKELLQGITE TAEEAEGTSK SS
Best Arabidopsis Sequence Match ( AT5G53150.1 )
(BLAST)
001: MECNKDEAKR AMDIAERKMT EKDYTGAKKF ANKAQNLFPE LDGLKQLFVA INVYISGEKT FAGEADWYGV LGVDPFASDE ALKKQYRKLV LMLHPDKNKC
101: KGAEGAFNLV AEAWALLSDK DKRILYNVKR GKDVKAAQQR FPTTQREIPS HQPTSNGIPN VREHVVSSAR ARYKPATRKP AARMDRSRTG SPAFVYPTQE
201: SSTFWTMCNK CDTQYEYQRV YLNQTLLCPH CHHGFVAEEK TPPTNIPKPP VNISSNQHHR SSKNQASNKN SNGSSYRREP ATSVNHNFQW DSSRMGGSYS
301: RNATNETANV VQQGQDKLKR VFWETQEREA ARGFTNSDLG NFKRQKTDDS HMRGPSAGSR HPYVQALLRS DIKKALMDRG QSEIFKRLPM MIAKMEGKVN
401: PTEGEKNSTK AMSSKASEVE RSKMSSTANE VERSVEVIPH ESDEVKEIVV PDSDFHNFDL DRSESAFKDD QIWAAYDDAD GMPRFYARIQ KVISVNPFKL
501: KISWLNSKTT SEFGPIDWMG AGFAKSCGDF RCGRYESTDT LNAFSHSVDF TKGARGLLHI LPKKGQVWAL YRNWSPEWDK NTPDEVKHKY EMVEVLDDYT
601: EDDQSLTVAL LLKAEGFRVV FRRCTEKLGV RKIAKEEMLR FSHQVPHYIL TGKEADNAPE GFLELDPAAT PCAFSSENAE ADEKSEAVKE NEQGEAVKEN
701: EESEALKENE ESEAVKENEE VGMDLD
Arabidopsis Description
DnaJ heat shock amino-terminal domain protein [Source:UniProtKB/TrEMBL;Acc:Q9FGM2]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.