Factsheet for HORVU1Hr1G001860.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

cytosol 1
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus
MultiLoc:	cytosol
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU4Hr1G029030.3
HORVU4Hr1G038850.14
HORVU5Hr1G089980.2
HORVU5Hr1G090000.2
HORVU6Hr1G013200.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G05230.1	HORVU4Hr1G029030.3	AT4G36690.1	21798944
AT2G05230.1	HORVU4Hr1G038850.14	AT4G36690.1	21798944
AT2G05230.1	HORVU5Hr1G089980.2	AT4G36690.1	21798944
AT2G05230.1	HORVU5Hr1G090000.2	AT4G36690.1	21798944
AT2G05230.1	HORVU6Hr1G013200.1	AT5G60340.1	21798944
AT2G05250.1	HORVU4Hr1G029030.3	AT4G36690.1	21798944
AT2G05250.1	HORVU4Hr1G038850.14	AT4G36690.1	21798944
AT2G05250.1	HORVU5Hr1G089980.2	AT4G36690.1	21798944
AT2G05250.1	HORVU5Hr1G090000.2	AT4G36690.1	21798944
AT2G05250.1	HORVU6Hr1G013200.1	AT5G60340.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_17s0000g01140.t01	Wine grape	cytosol	27.27	47.62
PGSC0003DMT400092645	Potato	cytosol	7.73	26.36
HORVU4Hr1G083260.1	Barley	cytosol	45.23	26.08
HORVU3Hr1G117190.1	Barley	cytosol	42.5	24.54
CDX76994	Canola	nucleus	32.27	24.4
Bra034258.1-P	Field mustard	cytosol	32.5	23.1
KRH14137	Soybean	nucleus	36.82	22.91
VIT_12s0057g00710.t01	Wine grape	cytosol	36.14	22.91
KRH73997	Soybean	nucleus	36.59	22.84
CDY35353	Canola	cytosol	31.82	22.47
HORVU2Hr1G070040.6	Barley	cytosol	37.27	22.25
CDY47298	Canola	cytosol	29.32	22.09
CDX74632	Canola	cytosol	29.09	21.81
AT5G50115.1	Thale cress	cytosol	22.95	20.82
HORVU7Hr1G005730.1	Barley	cytosol	21.14	20.81
AT2G25560.1	Thale cress	cytosol	30.91	20.73
PGSC0003DMT400015678	Potato	nucleus	35.68	19.92
PGSC0003DMT400048481	Potato	cytosol	35.0	19.67
CDX93081	Canola	nucleus	30.91	19.62
Bra013179.1-P	Field mustard	nucleus	30.91	19.62
Bra035378.1-P	Field mustard	cytosol	30.68	19.62
CDY15046	Canola	nucleus	30.68	19.57
Solyc07g047690.1.1	Tomato	nucleus	35.0	19.54
Solyc05g040050.1.1	Tomato	nucleus	34.55	19.41
CDX76752	Canola	nucleus	27.27	19.39
AT2G05250.1	Thale cress	cytosol	30.91	19.26
AT2G05230.1	Thale cress	cytosol	30.91	19.26
CDY11521	Canola	nucleus	25.91	19.26
Bra007790.1-P	Field mustard	nucleus	25.91	19.26
HORVU3Hr1G095280.1	Barley	nucleus	15.91	14.0
HORVU4Hr1G043860.4	Barley	cytosol	27.73	12.86
HORVU7Hr1G050080.1	Barley	nucleus	28.86	12.28
HORVU6Hr1G033850.1	Barley	cytosol	27.05	12.21
HORVU3Hr1G051850.2	Barley	nucleus	29.32	11.41
HORVU2Hr1G084660.1	Barley	cytosol	22.5	11.38
HORVU2Hr1G013270.2	Barley	cytosol	21.59	10.93
HORVU3Hr1G096340.2	Barley	cytosol	17.27	10.16
HORVU1Hr1G008940.2	Barley	nucleus	27.5	10.1
HORVU5Hr1G116070.3	Barley	cytosol	5.45	9.38
Bra002184.1-P	Field mustard	cytosol	2.5	4.2

Protein Annotations

EnsemblPlants:HORVU1Hr1G001860.1	EnsemblPlantsGene:HORVU1Hr1G001860	InterPro:DUF3444	PANTHER:PTHR44137	PANTHER:PTHR44137:SF4	PFAM:PF11926
SEG:seg	UniParc:UPI000B46D8FC	UniProt:A0A287EFW1	MapMan:35.2	:	:

Description

No Description!

Coordinates

chrchr1H:+:4132589..4146968

Molecular Weight (calculated)

49476.2 Da

IEP (calculated)

7.237

GRAVY (calculated)

-0.762

Length

440 amino acids

Sequence
(BLAST)

001: MECNKGGERN YECISTILKH GASRPRKRKQ DVGSETSAVR NNCHKQFQAN EAPMPQTENV HAVQTENQDA SSARNFQCSP VYMAGGSILA SSNTGATEFQ
101: QVNGGRNGKV RLPTKILPKC PIPKDERRKL LIQKAKSGLT EKLREIRSNN DGSHSNKDAE KEDDRPSTYI VPDPHFHDFD KDRNEESFQS GQVWASYGDK
201: DGMPHCYVLI KKLLSLSPFK VGINFLNGAR TSNEFGSFNW VSSDLRKTCG DFRIGMYETS SALNAFSHQI TFDKGPRGII SIYPQKGDIW AVYRNWSPNW
301: NRNTPDNVMQ VYDLVDVLDD YDDEHGISVT PLIKVAGFRT VFRRCLDGYA NKRIMKEEML RFSHQVPFYR MTGDEAPDVP MGCYEVDPAA LSKELLEEIT
401: EAVEEGKEIP REKAPSAPKD SCELDPGRTE TMGKGKGKLV

Best Arabidopsis Sequence Match ( AT5G53150.1 )
(BLAST)

001: MECNKDEAKR AMDIAERKMT EKDYTGAKKF ANKAQNLFPE LDGLKQLFVA INVYISGEKT FAGEADWYGV LGVDPFASDE ALKKQYRKLV LMLHPDKNKC
101: KGAEGAFNLV AEAWALLSDK DKRILYNVKR GKDVKAAQQR FPTTQREIPS HQPTSNGIPN VREHVVSSAR ARYKPATRKP AARMDRSRTG SPAFVYPTQE
201: SSTFWTMCNK CDTQYEYQRV YLNQTLLCPH CHHGFVAEEK TPPTNIPKPP VNISSNQHHR SSKNQASNKN SNGSSYRREP ATSVNHNFQW DSSRMGGSYS
301: RNATNETANV VQQGQDKLKR VFWETQEREA ARGFTNSDLG NFKRQKTDDS HMRGPSAGSR HPYVQALLRS DIKKALMDRG QSEIFKRLPM MIAKMEGKVN
401: PTEGEKNSTK AMSSKASEVE RSKMSSTANE VERSVEVIPH ESDEVKEIVV PDSDFHNFDL DRSESAFKDD QIWAAYDDAD GMPRFYARIQ KVISVNPFKL
501: KISWLNSKTT SEFGPIDWMG AGFAKSCGDF RCGRYESTDT LNAFSHSVDF TKGARGLLHI LPKKGQVWAL YRNWSPEWDK NTPDEVKHKY EMVEVLDDYT
601: EDDQSLTVAL LLKAEGFRVV FRRCTEKLGV RKIAKEEMLR FSHQVPHYIL TGKEADNAPE GFLELDPAAT PCAFSSENAE ADEKSEAVKE NEQGEAVKEN
701: EESEALKENE ESEAVKENEE VGMDLD

Arabidopsis Description

DnaJ heat shock amino-terminal domain protein [Source:UniProtKB/TrEMBL;Acc:Q9FGM2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.