Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2A01G084900.1 | Wheat | nucleus | 91.01 | 91.01 |
| TraesCS2B01G099600.2 | Wheat | nucleus | 90.43 | 85.23 |
| TraesCS2D01G082800.1 | Wheat | nucleus | 90.52 | 85.17 |
| Os11t0578100-00 | Rice | cytosol | 63.06 | 61.92 |
| Os11t0574200-00 | Rice | cytosol | 16.92 | 53.52 |
| EES09993 | Sorghum | nucleus | 55.42 | 51.95 |
| Zm00001d052947_P001 | Maize | plastid | 41.49 | 49.6 |
| KXG28768 | Sorghum | nucleus | 45.94 | 48.72 |
| HORVU4Hr1G043860.4 | Barley | cytosol | 43.23 | 47.1 |
| HORVU3Hr1G051850.2 | Barley | nucleus | 47.87 | 43.77 |
| PGSC0003DMT400057888 | Potato | cytosol | 7.93 | 41.41 |
| OQU83709 | Sorghum | cytosol | 45.94 | 40.88 |
| Bra039476.1-P | Field mustard | cytosol | 7.74 | 38.84 |
| CDX74107 | Canola | cytosol | 9.67 | 37.31 |
| PGSC0003DMT400089411 | Potato | cytosol | 7.74 | 35.71 |
| CDX74108 | Canola | cytosol | 6.87 | 35.15 |
| VIT_05s0020g02050.t01 | Wine grape | nucleus | 28.14 | 34.85 |
| Bra001194.1-P | Field mustard | cytosol | 6.77 | 34.65 |
| Solyc01g067770.1.1 | Tomato | extracellular, vacuole | 9.09 | 34.43 |
| HORVU6Hr1G033850.1 | Barley | cytosol | 31.24 | 33.13 |
| CDY13919 | Canola | nucleus | 14.99 | 32.84 |
| KRH11282 | Soybean | nucleus | 29.4 | 31.41 |
| CDX88917 | Canola | nucleus | 10.06 | 31.33 |
| KRH21004 | Soybean | nucleus | 29.21 | 31.2 |
| KRH50936 | Soybean | nucleus | 28.72 | 31.0 |
| Solyc01g067780.1.1 | Tomato | cytosol | 26.98 | 30.9 |
| PGSC0003DMT400058792 | Potato | nucleus | 27.27 | 30.75 |
| CDX92582 | Canola | nucleus | 24.85 | 30.52 |
| CDY08056 | Canola | nucleus | 18.18 | 29.94 |
| KRH34004 | Soybean | cytosol | 9.19 | 29.87 |
| PGSC0003DMT400086601 | Potato | cytosol | 5.8 | 29.85 |
| Solyc01g098250.2.1 | Tomato | nucleus | 28.43 | 29.61 |
| CDY24701 | Canola | nucleus | 16.83 | 29.54 |
| CDY13918 | Canola | nucleus | 16.25 | 29.32 |
| KRG92798 | Soybean | cytosol | 19.83 | 28.91 |
| HORVU1Hr1G001860.1 | Barley | nucleus | 12.28 | 28.86 |
| Bra006478.1-P | Field mustard | nucleus | 14.8 | 28.76 |
| Bra002183.1-P | Field mustard | nucleus | 15.67 | 28.52 |
| Solyc08g029220.1.1 | Tomato | nucleus | 21.66 | 28.39 |
| CDX88918 | Canola | cytosol | 14.6 | 28.38 |
| PGSC0003DMT400058788 | Potato | nucleus | 13.35 | 28.22 |
| KRH34003 | Soybean | cytosol | 7.93 | 28.18 |
| CDX70837 | Canola | mitochondrion | 13.73 | 28.17 |
| KRH02180 | Soybean | cytosol, nucleus, plastid | 28.43 | 28.16 |
| PGSC0003DMT400038431 | Potato | nucleus | 21.37 | 28.08 |
| PGSC0003DMT400057904 | Potato | nucleus | 29.21 | 27.94 |
| CDX70843 | Canola | extracellular, golgi | 14.31 | 27.36 |
| Bra020757.1-P | Field mustard | nucleus | 17.21 | 27.26 |
| CDY05255 | Canola | nucleus | 17.31 | 27.04 |
| Bra006479.1-P | Field mustard | cytosol | 14.41 | 26.99 |
| PGSC0003DMT400094016 | Potato | nucleus | 7.64 | 26.96 |
| KRG96896 | Soybean | cytosol | 27.56 | 26.94 |
| Bra009972.1-P | Field mustard | nucleus | 16.34 | 26.87 |
| CDX86172 | Canola | nucleus | 16.34 | 26.87 |
| KRH68628 | Soybean | cytosol | 27.56 | 26.71 |
| VIT_14s0030g00640.t01 | Wine grape | nucleus | 30.17 | 26.69 |
| CDX99992 | Canola | cytosol | 24.27 | 26.67 |
| HORVU2Hr1G084660.1 | Barley | cytosol | 22.34 | 26.55 |
| HORVU1Hr1G008940.2 | Barley | nucleus | 30.56 | 26.38 |
| CDY19714 | Canola | nucleus | 24.47 | 26.3 |
| Solyc10g007630.1.1 | Tomato | cytosol | 12.19 | 25.93 |
| CDX80667 | Canola | nucleus | 16.63 | 25.86 |
| HORVU2Hr1G013270.2 | Barley | cytosol | 21.57 | 25.66 |
| PGSC0003DMT400057893 | Potato | cytosol | 11.99 | 25.62 |
| CDY27809 | Canola | nucleus | 24.27 | 25.3 |
| Solyc01g098310.1.1 | Tomato | cytosol | 11.12 | 25.22 |
| PGSC0003DMT400054841 | Potato | cytosol | 11.99 | 25.1 |
| CDX70840 | Canola | nucleus | 14.12 | 25.0 |
| Solyc01g098340.2.1 | Tomato | cytosol | 19.25 | 24.88 |
| Bra006476.1-P | Field mustard | nucleus | 14.12 | 24.83 |
| CDX88920 | Canola | nucleus | 14.12 | 24.83 |
| PGSC0003DMT400057894 | Potato | cytosol | 9.19 | 24.48 |
| HORVU3Hr1G096340.2 | Barley | cytosol | 17.7 | 24.47 |
| CDX92586 | Canola | nucleus | 8.12 | 24.0 |
| AT5G37760.1 | Thale cress | cytosol | 4.74 | 23.67 |
| CDX88924 | Canola | plastid | 16.15 | 23.62 |
| Bra006473.1-P | Field mustard | plastid | 16.05 | 23.61 |
| PGSC0003DMT400057887 | Potato | cytosol | 19.15 | 23.52 |
| HORVU2Hr1G070040.6 | Barley | cytosol | 16.73 | 23.47 |
| AT4G19590.2 | Thale cress | nucleus | 8.41 | 23.26 |
| HORVU3Hr1G117190.1 | Barley | cytosol | 16.83 | 22.83 |
| Bra024236.1-P | Field mustard | nucleus | 8.12 | 22.83 |
| HORVU7Hr1G005730.1 | Barley | cytosol | 9.86 | 22.82 |
| HORVU4Hr1G083260.1 | Barley | cytosol | 16.15 | 21.89 |
| CDY41935 | Canola | cytosol | 11.22 | 21.8 |
| Bra039461.1-P | Field mustard | cytosol | 11.22 | 21.76 |
| CDY41919 | Canola | nucleus, plastid | 25.05 | 21.75 |
| Solyc01g098330.1.1 | Tomato | nucleus | 8.51 | 21.46 |
| CDY27796 | Canola | cytosol | 10.93 | 21.36 |
| CDX92856 | Canola | nucleus | 9.57 | 21.06 |
| Bra039477.1-P | Field mustard | plastid | 10.93 | 21.0 |
| CDY29872 | Canola | cytosol | 8.8 | 20.4 |
| HORVU5Hr1G116070.3 | Barley | cytosol | 4.93 | 19.92 |
| CDY27811 | Canola | nucleus | 8.61 | 18.58 |
| HORVU3Hr1G095280.1 | Barley | nucleus | 8.12 | 16.8 |
| CDX70844 | Canola | mitochondrion, plasma membrane | 11.61 | 14.05 |
| Bra002182.1-P | Field mustard | nucleus | 14.6 | 13.92 |
| CDY13917 | Canola | endoplasmic reticulum, extracellular, mitochondrion | 5.51 | 13.67 |
| Bra039474.1-P | Field mustard | nucleus | 19.05 | 12.91 |
| Bra006477.1-P | Field mustard | cytosol | 17.12 | 12.87 |
| CDX70841 | Canola | nucleus | 16.44 | 11.75 |
| CDY41917 | Canola | nucleus | 10.25 | 11.09 |
| CDX88919 | Canola | cytosol | 16.34 | 10.69 |
Protein Annotations
| EMBL:AK359981 | EnsemblPlants:HORVU7Hr1G050080.1 | EnsemblPlantsGene:HORVU7Hr1G050080 | Gene3D:1.10.287.110 | InterPro:DUF3444 | InterPro:DnaJ_domain |
| InterPro:DnaJ_domain_CS | InterPro:IPR001623 | InterPro:IPR036869 | InterPro:J_dom_sf | PANTHER:PTHR10825 | PANTHER:PTHR10825:SF27 |
| PFAM:PF00226 | PFAM:PF11926 | PFscan:PS50076 | PRINTS:PR00625 | ScanProsite:PS00636 | SEG:seg |
| SMART:SM00271 | SUPFAM:SSF46565 | UniParc:UPI0002005992 | UniProt:F2D7W9 | MapMan:35.2 | : |
Description
Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2D7W9]
Coordinates
chrchr7H:+:179063699..179070134
Molecular Weight (calculated)
115671.0 Da
IEP (calculated)
7.004
GRAVY (calculated)
-0.491
Length
1034 amino acids
Sequence
(BLAST)
(BLAST)
0001: MMECNREEAS RAREIAVKKL ENKDFVGARK IALKAQILFP ELENISQLLC VCTVHCAAEA RVNGETDWYA ILQVEATTDH ANIRKQYLRL AFSLHPDKNC
0101: FPGADAAFKL VAEAHSILCD QTKRSHYDIR RQNASRKVPK QATQQQKKSG TSKCNVPGYV LTFWTICAHC QMRYQYHNHV LNSTIRCLNC KNNFFACKYN
0201: LQEQYVPTSS SVPTNSQIPT KTFPSQQGCR VKLSSAQETT DVNPRMNVAQ CDSYIKGYSR PTMGEKASRS RTSGQSQFSA MNQEEPAVPT ANEHMGGWSI
0301: PDPPNPNIIG RPKSGTADAS AASNAMNVPG PAKLSSTGVN TCAKIRINVA ECDIIGHANP SGEKEANQLD ITKGKVKIPA KTRSKSSAQT VNMNTGVLDR
0401: KNLGIEDVST VLNAAGSPIL QRSARRTQDA DGSSSLNYNS KKKRRKNNFP SNADLNGKEI FDDNVINVDR QSVPSDVSGK VDIQEEAKTL DIGDQDNISA
0501: EVTDTVGQNQ PCYSVKLSFP DADFFDFEKL RDANLFAIGQ IWALYDNLDG MPRYYAKIKH FDASNFKVHL TWLERIAMNE AEEKWSDEEL PVACGSFSLG
0601: TTDISQDRLI FSHIVSWTKG KRRKYEVHPS KGEVWALYKG WNMQWGSDAD NHRSYEYEVV KVLSNFSVSA GVTVVPLVRI DGFVSLFATV KEKSDIVVAP
0701: SELLRFSHSV PFYRTNGTEK VGVPGGFLEL DTACLPIDLD AAFPCVPLDS CMSPGKKEGS AFIDLSTDSA SSRGKHEYIS SEPNKSLQRN LNAPNALGDF
0801: SEQNSPSLVY TYPDSEFYNF EECRSCQNFE RGQIWALYSD VDNFPKFYGW VSKVELEPFK VYLTWLEVCP QVEQGKQWLE QDIPVSCGKF EIRNWKTMYE
0901: TNDAFSHLVY TGHDPNQQIE IVPQVGEIWV IYMNWTPDWT PSSTRACGFA IGEIIERTEA STKVSLLTQV NGYTSVFKPG KRKRVVEIPT RDNLKFSHRV
1001: PSFCLTEGNG VKLSGFYELD PASVPDFFLY KDAQ
0101: FPGADAAFKL VAEAHSILCD QTKRSHYDIR RQNASRKVPK QATQQQKKSG TSKCNVPGYV LTFWTICAHC QMRYQYHNHV LNSTIRCLNC KNNFFACKYN
0201: LQEQYVPTSS SVPTNSQIPT KTFPSQQGCR VKLSSAQETT DVNPRMNVAQ CDSYIKGYSR PTMGEKASRS RTSGQSQFSA MNQEEPAVPT ANEHMGGWSI
0301: PDPPNPNIIG RPKSGTADAS AASNAMNVPG PAKLSSTGVN TCAKIRINVA ECDIIGHANP SGEKEANQLD ITKGKVKIPA KTRSKSSAQT VNMNTGVLDR
0401: KNLGIEDVST VLNAAGSPIL QRSARRTQDA DGSSSLNYNS KKKRRKNNFP SNADLNGKEI FDDNVINVDR QSVPSDVSGK VDIQEEAKTL DIGDQDNISA
0501: EVTDTVGQNQ PCYSVKLSFP DADFFDFEKL RDANLFAIGQ IWALYDNLDG MPRYYAKIKH FDASNFKVHL TWLERIAMNE AEEKWSDEEL PVACGSFSLG
0601: TTDISQDRLI FSHIVSWTKG KRRKYEVHPS KGEVWALYKG WNMQWGSDAD NHRSYEYEVV KVLSNFSVSA GVTVVPLVRI DGFVSLFATV KEKSDIVVAP
0701: SELLRFSHSV PFYRTNGTEK VGVPGGFLEL DTACLPIDLD AAFPCVPLDS CMSPGKKEGS AFIDLSTDSA SSRGKHEYIS SEPNKSLQRN LNAPNALGDF
0801: SEQNSPSLVY TYPDSEFYNF EECRSCQNFE RGQIWALYSD VDNFPKFYGW VSKVELEPFK VYLTWLEVCP QVEQGKQWLE QDIPVSCGKF EIRNWKTMYE
0901: TNDAFSHLVY TGHDPNQQIE IVPQVGEIWV IYMNWTPDWT PSSTRACGFA IGEIIERTEA STKVSLLTQV NGYTSVFKPG KRKRVVEIPT RDNLKFSHRV
1001: PSFCLTEGNG VKLSGFYELD PASVPDFFLY KDAQ
001: MNAQVGVAMG ISQNLEADNN SFLCDSGSAG AVPQKISGCA GLKFNDFDRL REGVKFEAGQ TWAIYNNTVD QMPRLYAQIR KVSAPCFSLR ITYLEPDPDG
101: EKETQWFEED LPVSVGKFRL GENKSTQDRS IFSHVIHCNE RSNTSCFSIT CRFIDTCHFS VSPRKGETWA LFKNWDIKWS SELDSHRKYE YEFVEILSDY
201: ADEAGVYVAY LHKAKGFASV FFRMGTGYEG IFRILPRSLY RFSHRVPSFK LTGDEGNGVA KDAYELDEAA LPETIEEFIM PSNSESETKS EHQAIYFASE
301: GKVFQTGQIW SFHSGYDDLP LYYGRIQKIT FTQAFKQDPV IKLHISRLKA TRFPEDVINW KYGGMPVGCG TFYARKVQEI ITPSEVSHQI MPQTSMDGIE
401: YTILPKIGEV WAIYRYWSRY IDVDRLEFGL YDIVEILDDT LDYKVQLLTQ QPVSDDRNDM EHRLFRACTE YTSNEDDGSE PIFTIPKTER IRFSNKVPAT
501: RVTKEMYGEL EDNSKVEFRA TPINVIHC
101: EKETQWFEED LPVSVGKFRL GENKSTQDRS IFSHVIHCNE RSNTSCFSIT CRFIDTCHFS VSPRKGETWA LFKNWDIKWS SELDSHRKYE YEFVEILSDY
201: ADEAGVYVAY LHKAKGFASV FFRMGTGYEG IFRILPRSLY RFSHRVPSFK LTGDEGNGVA KDAYELDEAA LPETIEEFIM PSNSESETKS EHQAIYFASE
301: GKVFQTGQIW SFHSGYDDLP LYYGRIQKIT FTQAFKQDPV IKLHISRLKA TRFPEDVINW KYGGMPVGCG TFYARKVQEI ITPSEVSHQI MPQTSMDGIE
401: YTILPKIGEV WAIYRYWSRY IDVDRLEFGL YDIVEILDDT LDYKVQLLTQ QPVSDDRNDM EHRLFRACTE YTSNEDDGSE PIFTIPKTER IRFSNKVPAT
501: RVTKEMYGEL EDNSKVEFRA TPINVIHC
Arabidopsis Description
CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609); BEST Arabidopsis thaliana protein match is: Domain of unknown function (DUF3444) (TAIR:AT5G18740.1); Has 30201 Blast hits to 17322 proteins in 780 /.../es: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). [Source:TAIR;Acc:AT5G18730]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.