Factsheet for Bra002182.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 1
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX92586	Canola	nucleus	30.51	94.57
Bra006476.1-P	Field mustard	nucleus	40.83	75.34
Bra002183.1-P	Field mustard	nucleus	23.13	44.19
Bra006478.1-P	Field mustard	nucleus	21.01	42.86
Bra006479.1-P	Field mustard	cytosol	21.75	42.75
PGSC0003DMT400057888	Potato	cytosol	7.74	42.42
Bra039476.1-P	Field mustard	cytosol	7.1	37.38
Bra001194.1-P	Field mustard	cytosol	6.91	37.13
PGSC0003DMT400089411	Potato	cytosol	7.65	37.05
Bra006473.1-P	Field mustard	plastid	22.77	35.14
Bra002184.1-P	Field mustard	cytosol	7.93	32.82
Bra006477.1-P	Field mustard	cytosol	37.79	29.82
PGSC0003DMT400057894	Potato	cytosol	7.83	21.91
Os11t0574200-00	Rice	cytosol	6.54	21.71
TraesCS4A01G214500.1	Wheat	nucleus	13.36	21.64
PGSC0003DMT400057893	Potato	cytosol	9.12	20.45
GSMUA_Achr5P00460_001	Banana	cytosol	13.46	20.08
Solyc01g098340.2.1	Tomato	cytosol	14.75	20.0
Solyc10g007630.1.1	Tomato	cytosol	8.76	19.55
GSMUA_Achr11P...	Banana	nucleus	11.71	19.42
Solyc01g098310.1.1	Tomato	cytosol	8.11	19.3
Bra024236.1-P	Field mustard	nucleus	6.54	19.29
PGSC0003DMT400057887	Potato	cytosol	14.93	19.24
PGSC0003DMT400054841	Potato	cytosol	8.76	19.23
GSMUA_Achr2P02410_001	Banana	cytosol	13.46	18.86
Solyc01g098250.2.1	Tomato	nucleus	16.5	18.03
TraesCS4B01G101500.1	Wheat	cytosol	14.19	17.19
Bra039477.1-P	Field mustard	plastid	8.48	17.1
Zm00001d040846_P001	Maize	cytosol	14.65	16.99
Solyc01g098330.1.1	Tomato	nucleus	6.36	16.83
HORVU2Hr1G084660.1	Barley	cytosol	13.46	16.78
PGSC0003DMT400057904	Potato	nucleus	16.59	16.65
HORVU2Hr1G013270.2	Barley	cytosol	13.27	16.57
TraesCS2B01G095100.1	Wheat	cytosol	13.09	16.44
TraesCS2A01G347700.1	Wheat	mitochondrion	13.92	16.43
TraesCS2B01G366100.1	Wheat	cytosol	13.92	16.43
Bra020757.1-P	Field mustard	nucleus	9.86	16.39
EER88793	Sorghum	cytosol	14.29	16.35
TraesCS2D01G077700.1	Wheat	cytosol	13.0	16.34
Zm00001d052947_P001	Maize	plastid	13.0	16.3
OQU83710	Sorghum	cytosol	14.56	16.22
Os01t0375100-01	Rice	nucleus	15.02	16.17
HORVU6Hr1G033850.1	Barley	cytosol	14.47	16.1
EES00793	Sorghum	cytosol	14.47	16.07
HORVU4Hr1G043860.4	Barley	cytosol	14.01	16.02
TraesCS6A01G167100.1	Wheat	cytosol	14.38	15.98
Os06t0535300-01	Rice	nucleus	14.93	15.91
TraesCS6B01G194500.1	Wheat	cytosol	14.29	15.88
KXG28768	Sorghum	nucleus	14.19	15.79
KXG32106	Sorghum	cytosol	14.65	15.73
TraesCS6D01G155600.1	Wheat	cytosol	14.1	15.68
Os11t0578100-00	Rice	cytosol	15.21	15.67
KRG92798	Soybean	cytosol	10.23	15.66
KRH68628	Soybean	cytosol	15.39	15.65
Zm00001d008412_P001	Maize	cytosol	14.65	15.6
Bra039461.1-P	Field mustard	cytosol	7.65	15.57
TraesCS3A01G213800.3	Wheat	nucleus	14.56	15.44
Zm00001d008413_P001	Maize	cytosol	14.47	15.42
TraesCS3D01G215900.1	Wheat	nucleus	14.47	15.33
KRG96896	Soybean	cytosol	14.93	15.31
Bra009972.1-P	Field mustard	nucleus	8.76	15.1
TraesCS3B01G244000.4	Wheat	nucleus	14.38	15.09
EER98396	Sorghum	nucleus	15.85	15.07
TraesCS2A01G084900.1	Wheat	nucleus	14.19	14.89
Solyc08g029220.1.1	Tomato	nucleus	10.78	14.83
PGSC0003DMT400038431	Potato	nucleus	10.69	14.74
Zm00001d019461_P002	Maize	cytosol	15.12	14.7
HORVU7Hr1G050080.1	Barley	nucleus	13.92	14.6
OQU83714	Sorghum	cytosol, nucleus, plastid	13.92	14.3
TraesCS2A01G080400.1	Wheat	cytosol	10.41	14.04
TraesCS2D01G082800.1	Wheat	nucleus	14.19	14.01
TraesCS2B01G099600.2	Wheat	nucleus	14.1	13.95
HORVU1Hr1G008940.2	Barley	nucleus	15.21	13.77
Bra034258.1-P	Field mustard	cytosol	7.83	13.73
HORVU3Hr1G051850.2	Barley	nucleus	14.29	13.7
TraesCS1D01G042900.1	Wheat	nucleus	15.02	13.67
TraesCS1B01G054900.1	Wheat	nucleus	14.93	13.59
TraesCS1A01G042500.1	Wheat	nucleus	14.65	13.36
EES09993	Sorghum	nucleus	13.36	13.15
Bra035378.1-P	Field mustard	cytosol	8.29	13.08
OQU83709	Sorghum	cytosol	14.01	13.08
TraesCS2D01G078000.1	Wheat	cytosol	7.74	13.06
Bra041167.1-P	Field mustard	cytosol, nucleus, plastid	0.74	12.31
Bra003079.1-P	Field mustard	cytosol	8.02	12.27
Bra017315.1-P	Field mustard	nucleus	5.35	12.16
Bra013179.1-P	Field mustard	nucleus	7.74	12.12
Bra005331.1-P	Field mustard	nucleus	5.62	11.62
EES08665	Sorghum	nucleus	7.19	11.49
Bra007790.1-P	Field mustard	nucleus	6.27	11.49
Os11t0573800-00	Rice	nucleus	9.03	10.68
Bra039474.1-P	Field mustard	nucleus	12.9	9.17
Bra040290.1-P	Field mustard	cytosol, mitochondrion	1.47	8.79
TraesCS2D01G077900.1	Wheat	cytosol	4.15	8.33
Bra001216.1-P	Field mustard	cytosol	1.38	6.64
Bra013403.1-P	Field mustard	nucleus	2.49	4.98
Bra040300.1-P	Field mustard	cytosol	1.57	4.61
Bra031906.1-P	Field mustard	cytosol	0.37	4.35
Bra038959.1-P	Field mustard	nucleus	1.38	3.9
Bra020956.1-P	Field mustard	nucleus	1.11	3.44
KRH34003	Soybean	cytosol	0.83	3.09
Bra020958.1-P	Field mustard	cytosol	0.28	2.94
Bra020957.1-P	Field mustard	cytosol	0.55	2.91
KRH34004	Soybean	cytosol	0.74	2.52
Bra013404.1-P	Field mustard	nucleus	1.01	2.47
Bra020955.1-P	Field mustard	cytosol	0.37	1.42

Protein Annotations

EnsemblPlants:Bra002182.1	EnsemblPlants:Bra002182.1-P	EnsemblPlantsGene:Bra002182	InterPro:DUF3444	PFAM:PF11926	SEG:seg
UniParc:UPI000254375F	UniProt:M4CDA1	MapMan:35.2	:	:	:

Description

AT5G18730 (E=1e-171) | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G18740.1); Has 299 Blast hits to 137 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 299; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

Coordinates

chrA10:-:11044807..11048064

Molecular Weight (calculated)

123061.0 Da

IEP (calculated)

5.877

GRAVY (calculated)

-0.506

Length

1085 amino acids

Sequence
(BLAST)

0001: MEKTNLDGAP ELAAHHNQTF SSATNTGEKR KREGLASGER GTGYSSETEE VIIVGDTKAI KDFGFGGGEQ SQRSVFSKLQ AFNGQSNMSL KGSLGKKEAR
0101: EEPERAKQDS TFNDFDKLRE EVNFAVGQTW ALYDDKVDGM PRLYAQITKV SVPGFCLSVR WLEPDPDPKE EIQGYEKGLP VSVGRFKLGK TEDIKDRRRF
0201: SHLVQCSEGS SAGTFSVYPK EGETWAIFKA HITSLSSYFN HDWSAHPDSH SKYNYAFVEI FSEDCDYRRV PIGFLHKAKG FPGVFCRFNK EVDMSYIKRG
0301: CTMQFSHRVP SFKTTGIEAE GVPCRGAYEL DPAALPENIK EIDVPLHLLE EPSPTVSNHG EEDSTHSQCV YFASKGITFQ TGQVWSLCSG DDNLPRHYGK
0401: IQKITFIQAF EQDPVVKLHI GRLKARPNKG VIQWSDKDMP IGCGNFRARK VLEIFTDLAV FSRQISLVSS GDGNDYSILP KTGDVWAIYR NWSNDLEAVD
0501: LKSQTYDLVE VLDDKLDYKV LLLTPVGGFK SADSAGFGSA YVAATEHWID NADVRFTIPK CEMLRFSHQV TTSRVTKEVH GTWQEVYEPA IETSPVLSCA
0601: VSVGEKRKRN EHGEDFDGLK FNDFEKLRKE VNFSVGQTWA LYDKVDGMPR LYARIRKVSA PSFGLRIAYL EPDPDDEKQI QWLEEDLPVS AGQFKLGEHH
0701: NTKDLSIFSH VIHCMEGSNT GHLTVSPRKG ETWALFKNWD INWSSEPASH RSYEYEFVEI LSDYADKAGV SVAFLHKAKG YASVFFRMGT GHARILPHSL
0801: YRFSHSVPSI KLTGIEGVPK DAYELDQDAL PETIEEIMMP SISETQPKAI YFASEGKVFQ TGQFWSFYSG DDESPRYYCK IQKVSFTLVL NQEPSFKLHI
0901: SRLKKAIHFP EDVIDWKEGK MPRGCGTYYP RTVLETITPS ELSQQVMPQA SMDGKEYIIL PKIGEVWITY RSWSPDIEVD DDLDGLGYDI VEVLDDTLDY
1001: QVVLLDRESF YEEDKKFEYK WFSPGTKYKY KELGGLMPIF TIPKSERLRF SHSVRASRIT REIHGELKDL FKVDSRPLPY FLSGD

Best Arabidopsis Sequence Match ( AT5G18730.1 )
(BLAST)

001: MNAQVGVAMG ISQNLEADNN SFLCDSGSAG AVPQKISGCA GLKFNDFDRL REGVKFEAGQ TWAIYNNTVD QMPRLYAQIR KVSAPCFSLR ITYLEPDPDG
101: EKETQWFEED LPVSVGKFRL GENKSTQDRS IFSHVIHCNE RSNTSCFSIT CRFIDTCHFS VSPRKGETWA LFKNWDIKWS SELDSHRKYE YEFVEILSDY
201: ADEAGVYVAY LHKAKGFASV FFRMGTGYEG IFRILPRSLY RFSHRVPSFK LTGDEGNGVA KDAYELDEAA LPETIEEFIM PSNSESETKS EHQAIYFASE
301: GKVFQTGQIW SFHSGYDDLP LYYGRIQKIT FTQAFKQDPV IKLHISRLKA TRFPEDVINW KYGGMPVGCG TFYARKVQEI ITPSEVSHQI MPQTSMDGIE
401: YTILPKIGEV WAIYRYWSRY IDVDRLEFGL YDIVEILDDT LDYKVQLLTQ QPVSDDRNDM EHRLFRACTE YTSNEDDGSE PIFTIPKTER IRFSNKVPAT
501: RVTKEMYGEL EDNSKVEFRA TPINVIHC

Arabidopsis Description

CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609); BEST Arabidopsis thaliana protein match is: Domain of unknown function (DUF3444) (TAIR:AT5G18740.1); Has 30201 Blast hits to 17322 proteins in 780 /.../es: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). [Source:TAIR;Acc:AT5G18730]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.