Factsheet for TraesCS1B01G054900.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 2
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G042900.1	Wheat	nucleus	96.56	96.56
TraesCS1A01G042500.1	Wheat	nucleus	93.12	93.28
HORVU1Hr1G008940.2	Barley	nucleus	87.25	86.81
EER98396	Sorghum	nucleus	54.28	56.7
Zm00001d019461_P002	Maize	cytosol	51.76	55.29
GSMUA_Achr11P...	Banana	nucleus	24.83	45.26
PGSC0003DMT400057888	Potato	cytosol	6.88	41.41
GSMUA_Achr2P02410_001	Banana	cytosol	26.26	40.44
GSMUA_Achr5P00460_001	Banana	cytosol	23.74	38.93
PGSC0003DMT400089411	Potato	cytosol	7.21	38.39
VIT_05s0020g02050.t01	Wine grape	nucleus	26.26	37.48
CDX74107	Canola	cytosol	8.31	36.94
CDY13919	Canola	nucleus	14.6	36.86
CDX88917	Canola	nucleus	9.98	35.84
TraesCS6B01G194500.1	Wheat	cytosol	29.28	35.76
Bra039476.1-P	Field mustard	cytosol	6.04	34.95
KRH11282	Soybean	nucleus	28.27	34.81
KRH50936	Soybean	nucleus	27.77	34.55
KRH21004	Soybean	nucleus	28.02	34.5
Solyc01g067770.1.1	Tomato	extracellular, vacuole	7.89	34.43
TraesCS4B01G101500.1	Wheat	cytosol	25.42	33.82
CDX92582	Canola	nucleus	23.74	33.61
CDY24701	Canola	nucleus	16.11	32.6
TraesCS3B01G244000.4	Wheat	nucleus	28.27	32.59
Bra001194.1-P	Field mustard	cytosol	5.45	32.18
CDY08056	Canola	nucleus	16.95	32.17
Solyc01g067780.1.1	Tomato	cytosol	24.25	32.0
PGSC0003DMT400058792	Potato	nucleus	24.5	31.84
KRH02180	Soybean	cytosol, nucleus, plastid	27.85	31.8
Solyc01g098250.2.1	Tomato	nucleus	26.43	31.72
Solyc08g029220.1.1	Tomato	nucleus	20.89	31.56
KRH34003	Soybean	cytosol	7.63	31.27
CDX74108	Canola	cytosol	5.29	31.19
PGSC0003DMT400038431	Potato	nucleus	20.47	31.0
KRG92798	Soybean	cytosol	18.37	30.89
VIT_14s0030g00640.t01	Wine grape	nucleus	30.29	30.88
KRH34004	Soybean	cytosol	8.22	30.82
CDX70837	Canola	mitochondrion	13.0	30.75
PGSC0003DMT400058788	Potato	nucleus	12.5	30.47
PGSC0003DMT400057904	Potato	nucleus	27.43	30.25
Bra020757.1-P	Field mustard	nucleus	16.53	30.17
CDY05255	Canola	nucleus	16.53	29.76
Bra006479.1-P	Field mustard	cytosol	13.76	29.71
CDX70843	Canola	extracellular, golgi	13.42	29.57
KRG96896	Soybean	cytosol	26.17	29.49
CDX88918	Canola	cytosol	13.0	29.14
Bra006478.1-P	Field mustard	nucleus	13.0	29.14
CDX86172	Canola	nucleus	15.35	29.09
Bra009972.1-P	Field mustard	nucleus	15.35	29.09
Solyc10g007630.1.1	Tomato	cytosol	11.83	29.01
KRH68628	Soybean	cytosol	25.92	28.96
CDX99992	Canola	cytosol	22.82	28.91
PGSC0003DMT400086601	Potato	cytosol	4.87	28.86
CDX80667	Canola	nucleus	15.94	28.57
CDY19714	Canola	nucleus	22.99	28.48
TraesCS2B01G099600.2	Wheat	nucleus	26.17	28.44
PGSC0003DMT400094016	Potato	nucleus	6.88	27.99
CDY13918	Canola	nucleus	13.42	27.92
PGSC0003DMT400057894	Potato	cytosol	9.06	27.84
Bra002183.1-P	Field mustard	nucleus	13.26	27.82
PGSC0003DMT400054841	Potato	cytosol	11.49	27.73
TraesCS2B01G095100.1	Wheat	cytosol	19.55	26.97
TraesCS2B01G366100.1	Wheat	cytosol	20.55	26.66
CDX70840	Canola	nucleus	13.0	26.54
TraesCS3B01G607500.1	Wheat	cytosol	16.44	26.42
Solyc01g098340.2.1	Tomato	cytosol	17.62	26.25
Bra006476.1-P	Field mustard	nucleus	12.92	26.19
CDX88920	Canola	nucleus	12.92	26.19
CDY27809	Canola	nucleus	21.56	25.91
Bra006473.1-P	Field mustard	plastid	15.27	25.89
PGSC0003DMT400057887	Potato	cytosol	18.12	25.65
CDX88924	Canola	plastid	15.18	25.6
Solyc01g098310.1.1	Tomato	cytosol	9.73	25.44
PGSC0003DMT400057893	Potato	cytosol	10.23	25.21
TraesCS3B01G475500.1	Wheat	cytosol	15.77	24.97
CDX92586	Canola	nucleus	7.3	24.86
TraesCS2B01G301100.1	Wheat	cytosol	14.09	23.8
TraesCS4B01G319100.1	Wheat	cytosol	14.18	23.74
Solyc01g098330.1.1	Tomato	nucleus	7.97	23.17
TraesCS3B01G470100.1	Wheat	nucleus	14.09	23.14
CDY41935	Canola	cytosol	10.32	23.12
CDY27796	Canola	cytosol	10.23	23.06
Bra039461.1-P	Field mustard	cytosol	10.23	22.89
Bra024236.1-P	Field mustard	nucleus	7.05	22.83
CDY41919	Canola	nucleus, plastid	22.4	22.42
Bra039477.1-P	Field mustard	plastid	9.9	21.93
TraesCS5B01G508500.1	Wheat	cytosol	5.03	21.82
CDX92856	Canola	nucleus	8.31	21.06
CDY29872	Canola	cytosol	7.47	19.96
CDY27811	Canola	nucleus	6.54	16.28
CDX70844	Canola	mitochondrion, plasma membrane	11.16	15.57
CDY13917	Canola	endoplasmic reticulum, extracellular, mitochondrion	5.37	15.35
Bra002182.1-P	Field mustard	nucleus	13.59	14.93
Bra039474.1-P	Field mustard	nucleus	17.2	13.43
Bra006477.1-P	Field mustard	cytosol	15.44	13.38
CDX70841	Canola	nucleus	14.68	12.09
CDX88919	Canola	cytosol	14.77	11.13
CDY41917	Canola	nucleus	8.47	10.56

Protein Annotations

EnsemblPlants:TraesCS1B01G054900.1	EnsemblPlantsGene:TraesCS1B01G054900	Gene3D:1.10.287.110	InterPro:DUF3444	InterPro:DnaJ_domain	InterPro:IPR001623
InterPro:IPR036869	InterPro:J_dom_sf	PFAM:PF00226	PFAM:PF11926	PFscan:PS50076	PRINTS:PR00625
SEG:seg	SMART:SM00271	SUPFAM:SSF46565	TIGR:cd06257	MapMan:35.2	:

Description

No Description!

Coordinates

chr1B:+:36265891..36269469

Molecular Weight (calculated)

131953.0 Da

IEP (calculated)

8.020

GRAVY (calculated)

-0.728

Length

1192 amino acids

Sequence
(BLAST)

0001: MECNKEEASR AKDVSERKLH EADFPGAKKM ALKAHQLFPG LENISQLLAV CEVHCSSSVK INGETDWYGI LQVEPTADDM VLKKQYRKLA LLLHPDKNKF
0101: AGAEAAFKLI GEAYMTLTDH VKRSSHDNKR KVVFATSAPV PKKRARASKK TDPAHKTNNK ENFGAPQTQK NPQQQAGKSS GLSSFWTICL TCGTKYQYPC
0201: SSLMRFVLCR ICSRSFLAYD LSKKSVPAGV NTAYPGSVFG TQPQKFPPSQ QAHVTNQGQN NQSFAGWTHP AHQQQQSQNV PNQQTPAANQ QQHSQRRSPS
0301: AGSKNAMSSE GVGDPNNKGA TDSTKVSRAP SRKQNCADRT ELPFAQQSQD GPNQQTATAN QQQQCQRRPP SAVPTNVMSS EGLGDPNSKG ATESTKVSSA
0401: PIKEKDGADR TELPFVSSAK LSPTNMQKRG IQSQHFPSQR TSPVNQQVQS QKPSFNEGSS NLNSMGVSDS NVTANARTCT NMNVPRASLN KENGSSRTES
0501: PLASSDKVSP ANMGKGVMKD ANGAVKTGQN PQRSSQQENN VSNEDGSGGC RKGSDNIHDS PVAKRIRKGY SSSNADKNGG IVHEDGNVYT TQACSIPITK
0601: TPNENVEVVN GLDEKQGASK IEEMRNSGRD GVASSVVNSI PCEGDVSYPD PEFYDFEENR NATQFKADQI WAVYDDSDSM PRYYARIKQV HPNFMLWFSW
0701: LEFDPLNDAE KAWYSKDMPV ACGRFRIGKT ILTEDRKMFS HVVSWTKGKK RNSYEIYPVK GEVWALFRRC DFNPSSGSSD HRNYRYDIVE IKSDFAVGVG
0801: THVAPLVKVK GFVSLFVRSD KEEPYLIPGG DTLRFSHNIP FHRLSEADKP HIPNGAFELD PASMPSNLEE ASSSADLNRS STQEGNIGGN VSSTRDSFKC
0901: EMPAGKTKQG LDTAATNEGN VHNGVKKPNI NADGKHDNGS EASVIDAHTV DQWDDSFQSE SPATFVYPEP EFFNFGDIRS FDKFKSGQIW ALYCDIDKFP
1001: KYYAFIKKVD QDDLTIHIRW LEYCPCGETE KRLVQDGLSA SCGIFRLSSQ SDNYDCTSVF SHIMEVAPVT KGKKYEILPR VGQVWAIYKN WNRGWSFENF
1101: KSCEYDLVEV LEISAASLTL SYLTKVDGFS TVFMLERKGE STSAVKILRS DMMMFSHQIP SHCMTNEGDE LCGYWELDPA SVPENFLARK TK

Best Arabidopsis Sequence Match ( AT3G04980.2 )
(BLAST)

0001: MECNKEDAIR ASKIAEEKME AGDFVGAHKF VTKAQRLFPN LENIVQMMTI CDVHSSAIKK IKGLDDWYGV LQVQPYADAD TIKKQYRKLA LLLHPDKNKF
0101: AGAEAAFKLV GEANRLLSDQ IKRSQYDNRY RSHSMFANRH VNVYSGRHCA ATNNAAENIA GVFTFWTRCR HCGQCYKYLR EYMNTSMHCS SCQKSFVACK
0201: MRCDGVPPSS STAGRKEFQD QVMSNTSRQN ASTAAESGSS AADMGKNGKV GGKVNKKNQE KQKNGAVNRG TKKEEGCTEN DAEGRKPQTS ETGTNISAEM
0301: PKADVLKPQH QVKEEPDTSA EKSIPDLSAP QKNRAPKKKR KVVEESSKSF EVDSSDTAGA KTDTNEHNKR KSSRKKPQVS YAKEGSDGDF VSPPNKKTKS
0401: GFEFESEPNK KQTAEDNKSP KLAVSGVSSA SSHSYKGKAK KNAHSGNEDN LSAKNKVSEG CDGNGEDAAL LSKIGRVEKG YKANENSNPL DIPDLEFSVF
0501: KVERKTEDFA VNQVWSTTTD CRDGMPRKYA RVKKVLNGEF KLRITYLDPV LDKTDESIPV ACGKFKNGKT MEVKDSSIFS GQMHHLRCNN IVSIYPRKGE
0601: IWAIFREWEE EWNTSLKKHK FPYKYDFVEI VSDFHDLNGV GVAYLGKLKG SVQLFHWEPQ HGICQIQCSP KDMLRFSHKV PAVKMTGKEK ESVPPNSYEL
0701: DPAALPKDIF QVDAVDMEMD SEILKGKADG PYKVGAKAKA VQETASSPRK RQKSDDDNDD GVCSNLGEVI GGSNRSHIFS SCEVDDKNTS TKSRKDGEST
0801: DVFRLRKSPR LQTIPNHQGD EKKSAKQGNK MNTPKKMDKG LVTDSLGVDE KKTSKSRKNG EATDVFKLRK SPRLQTIPSQ QGDEMKSTKQ GNKMNTPKKT
0901: DKGLETDSLG VRKSPNGIHQ PAESQEGESS KKQGCNGEIP SLSKQNDLPT QLGGSTYKSP RTTHVSPHCK TPRRNAFDFQ NLRSEDKFEV NQIWAIYSND
1001: NGMPLEYVKI KKIETKPKFV LRGTPTELYP PSTEPVTRTV SCGEFKLLKG RPKIIPHASF SHLVKPFDSS KRFRFKVYPR KGEIWALYKN CDSTEEPDIV
1101: EVVEDNCDGE IVKVVALTAM GSSFQRKQGS DVGLIDISKA EMSRFSHQIP AIRHPKKTTR LVKGGYYWEL DPIAIPSRTI VID

Arabidopsis Description

DNAJ heat shock N-terminal domain-containing protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LPC5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.